Lsi11G014680.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G014680.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ubiquitin like
Location	chr11: 23237075 .. 23237827 (-)
Sequence length	753
RNA-Seq Expression	Lsi11G014680.1
Synteny	Lsi11G014680.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATCTTCATTGTCACAATGGGTCACGAATTCGCCATACAAATAAGCAATCAAGAACAAATCCTCGAAATCAAGAGAAAAATCGAACAGTTCATTGGCATTCCCATCGAATCCCAAACTCTCTCTGTTTACGGTTGCGAATTAGTCGACGGACTCGACATGGAGGATTATGATCAATTCATCTCAGAAGGTTCGCGAATCGATCTCTCAATCCATCAAATCATCGCACCGCCAAACGAGTTTCCGATCACTGTGGAATTCTCCGGCCAACGGATAAACATCGACGTCGACAAAACAGAGACGGTTCGTAGTTTAAAGCAGAAAATCCAGATAATCTACGGCTTACCGATTCAAGCAATGTCGCTATTTCTCTCCGGCGTGGAATTAGGCGAGGATTTCCGGAATCTGAGCGAATTTGGAATCGGTGATTTTTCGGAAGTGATAGTGTTTCTGAAAACGATGAATCGTTGTTTGAGTGATTCTCCATGGAGGAAGGTGAGTTTCGTGGTGGAGACGTCGTCGAGCTTGCTTAATGCTGCGTGTATTCCGATGGAAATGAAGGATTCGAGCACCGTAAGCGACGTCAGAGAACTGCTTTTGGCCGGAAAAATTCTTCCCGACGAGGAGTATTTATTTATTCATAAACAGAGGATTATGAGAGATAAGTGTAGTTTAAGATGGCATGGAGTTGAAAATGGCGATTTTCTCTATGTTTTTAAAGGCACCGTTAGCCGTGCTGAATTTTATTGA

mRNA sequence

ATGGAGATCTTCATTGTCACAATGGGTCACGAATTCGCCATACAAATAAGCAATCAAGAACAAATCCTCGAAATCAAGAGAAAAATCGAACAGTTCATTGGCATTCCCATCGAATCCCAAACTCTCTCTGTTTACGGTTGCGAATTAGTCGACGGACTCGACATGGAGGATTATGATCAATTCATCTCAGAAGGTTCGCGAATCGATCTCTCAATCCATCAAATCATCGCACCGCCAAACGAGTTTCCGATCACTGTGGAATTCTCCGGCCAACGGATAAACATCGACGTCGACAAAACAGAGACGGTTCGTAGTTTAAAGCAGAAAATCCAGATAATCTACGGCTTACCGATTCAAGCAATGTCGCTATTTCTCTCCGGCGTGGAATTAGGCGAGGATTTCCGGAATCTGAGCGAATTTGGAATCGGTGATTTTTCGGAAGTGATAGTGTTTCTGAAAACGATGAATCGTTGTTTGAGTGATTCTCCATGGAGGAAGGTGAGTTTCGTGGTGGAGACGTCGTCGAGCTTGCTTAATGCTGCGTGTATTCCGATGGAAATGAAGGATTCGAGCACCGTAAGCGACGTCAGAGAACTGCTTTTGGCCGGAAAAATTCTTCCCGACGAGGAGTATTTATTTATTCATAAACAGAGGATTATGAGAGATAAGTGTAGTTTAAGATGGCATGGAGTTGAAAATGGCGATTTTCTCTATGTTTTTAAAGGCACCGTTAGCCGTGCTGAATTTTATTGA

Coding sequence (CDS)

ATGGAGATCTTCATTGTCACAATGGGTCACGAATTCGCCATACAAATAAGCAATCAAGAACAAATCCTCGAAATCAAGAGAAAAATCGAACAGTTCATTGGCATTCCCATCGAATCCCAAACTCTCTCTGTTTACGGTTGCGAATTAGTCGACGGACTCGACATGGAGGATTATGATCAATTCATCTCAGAAGGTTCGCGAATCGATCTCTCAATCCATCAAATCATCGCACCGCCAAACGAGTTTCCGATCACTGTGGAATTCTCCGGCCAACGGATAAACATCGACGTCGACAAAACAGAGACGGTTCGTAGTTTAAAGCAGAAAATCCAGATAATCTACGGCTTACCGATTCAAGCAATGTCGCTATTTCTCTCCGGCGTGGAATTAGGCGAGGATTTCCGGAATCTGAGCGAATTTGGAATCGGTGATTTTTCGGAAGTGATAGTGTTTCTGAAAACGATGAATCGTTGTTTGAGTGATTCTCCATGGAGGAAGGTGAGTTTCGTGGTGGAGACGTCGTCGAGCTTGCTTAATGCTGCGTGTATTCCGATGGAAATGAAGGATTCGAGCACCGTAAGCGACGTCAGAGAACTGCTTTTGGCCGGAAAAATTCTTCCCGACGAGGAGTATTTATTTATTCATAAACAGAGGATTATGAGAGATAAGTGTAGTTTAAGATGGCATGGAGTTGAAAATGGCGATTTTCTCTATGTTTTTAAAGGCACCGTTAGCCGTGCTGAATTTTATTGA

Protein sequence

MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQFISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNAACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSRAEFY

Homology

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot
Match: P0CG70 (Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ubi PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 58/214 (27.10%), Postives = 112/214 (52.34%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + I  +K+KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++T+ ++KQKIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R LS++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 TIDN---VKQKIQDKEGIPPDQQRLIFAGKQLED 204

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot
Match: P42740 (Polyubiquitin OS=Aglaothamnion neglectum OX=2765 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.7e-12
Identity = 57/214 (26.64%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + I  +K KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                 ++ + ++H ++       I V+  +G+ I ++V+ ++T+ ++K KIQ   G+P 
Sbjct: 61  ------NQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R LS++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTITGKTITLEVESSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 TIEN---VKTKIQDKEGIPPDQQRLIFAGKQLED 204

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot
Match: P42739 (Polyubiquitin (Fragment) OS=Acetabularia peniculus OX=35862 PE=3 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12
Identity = 57/214 (26.64%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + +  +K KI+   GIP + Q L   G +L DGL + DY+
Sbjct: 42  MQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYN 101

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++TV ++K KIQ   G+P 
Sbjct: 102 ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPP 161

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R L+++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 162 DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 221

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 222 TVEN---VKSKIQDKEGIPPDQQRLIFAGKQLED 245

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot
Match: Q8MKD1 (Polyubiquitin-B OS=Equus caballus OX=9796 GN=UBB PE=2 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12
Identity = 58/241 (24.07%), Postives = 117/241 (48.55%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++   + I  +K KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++T+ ++K KIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLL 180
               L  +G +L ED R LS++ I   S + + L+             +   V+T    L
Sbjct: 121 DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRG---------GMQIFVKT----L 180

Query: 181 NAACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLY 240
               I +E++ S T+ +V+  +   + +P ++  FI   + + D  +L  + ++    L+
Sbjct: 181 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLH 221

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot
Match: P22589 (Polyubiquitin OS=Phytophthora infestans OX=4787 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12
Identity = 59/214 (27.57%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    + +   + I  +K+KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I +DV+ ++++ ++KQKIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R LS++ I   S + + L+    M   +     + ++  VE S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           S+ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 SIDN---VKQKIQDKEGIPPDQQRLIFAGKQLED 204

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL
Match: A0A6J1GJL4 (uncharacterized protein LOC111454902 OS=Cucurbita moschata OX=3662 GN=LOC111454902 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 216/249 (86.75%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKIEQFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIEQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI QIIAPPN FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQ+
Sbjct: 61  FISEGSRIDLSIDQIIAPPNNFPISVEFSGRQINIDIDKTETVHSLKQKIQIIYGTPIQS 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           MSLF SGVELGED+RNLSEFGI + SEV VFLKT +R LSD PWRKVSFVV+TSSSLLNA
Sbjct: 121 MSLFHSGVELGEDYRNLSEFGISESSEVTVFLKTTSR-LSDCPWRKVSFVVKTSSSLLNA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIHKQRIMRDKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHKQRIMRDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAEF 250
           KGTVS  EF
Sbjct: 241 KGTVSCGEF 247

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL
Match: A0A6J1I0Y4 (uncharacterized protein LOC111468065 OS=Cucurbita maxima OX=3661 GN=LOC111468065 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 213/248 (85.89%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKIEQFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIEQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI QIIAPPN FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQA
Sbjct: 61  FISEGSRIDLSIDQIIAPPNNFPISVEFSGRQINIDIDKTETVHSLKQKIQIIYGTPIQA 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           +SLF SGVELGED+RNLS+FGIG+ SEV VFLKTM+R LSD PWRKVSFVV+TSSSLL+A
Sbjct: 121 ISLFHSGVELGEDYRNLSDFGIGESSEVTVFLKTMSR-LSDCPWRKVSFVVKTSSSLLDA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIH+QRIM+DKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHEQRIMKDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAE 249
           KGTVS  E
Sbjct: 241 KGTVSCGE 246

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL
Match: A0A0A0K5K6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044280 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 216/251 (86.06%), Postives = 231/251 (92.03%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           M+IFIVTMGHEF I I NQEQI+EIKRKIEQFIGIPIESQTLSVYGCEL+DGL MEDYDQ
Sbjct: 1   MKIFIVTMGHEFPIDIENQEQIIEIKRKIEQFIGIPIESQTLSVYGCELLDGLVMEDYDQ 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FI+EGSRIDLS+ QIIAP NEFPI VEFSGQRINI++DKTETV SLKQKIQIIY LPIQ 
Sbjct: 61  FITEGSRIDLSVDQIIAPSNEFPIAVEFSGQRININIDKTETVHSLKQKIQIIYSLPIQT 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLS-DSPWRKVSFVVETSSSLLN 180
           MSLF SG+EL ED +NLSEFGIG+FSEVIVF+KTM+R LS DS  RKVSFVVE SSSLLN
Sbjct: 121 MSLFHSGMELVEDCQNLSEFGIGEFSEVIVFMKTMSRYLSEDSSRRKVSFVVEMSSSLLN 180

Query: 181 AACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYV 240
           AACIPMEMKDSSTV+DVRELLL+GKILPD+EYLFIHKQRIMRDK SLRWHGVENGDFLYV
Sbjct: 181 AACIPMEMKDSSTVNDVRELLLSGKILPDDEYLFIHKQRIMRDKRSLRWHGVENGDFLYV 240

Query: 241 FKGTVSRAEFY 251
           FKGTVSR EFY
Sbjct: 241 FKGTVSRGEFY 251

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL
Match: A0A1S3C1K2 (uncharacterized protein LOC103495579 OS=Cucumis melo OX=3656 GN=LOC103495579 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.2e-111
Identity = 212/254 (83.46%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           M+IFIVTMGHEF I+I NQEQI+EIKRKIEQFIGIPIESQTLSVYGCELVDGL MEDYDQ
Sbjct: 1   MKIFIVTMGHEFPIEIGNQEQIIEIKRKIEQFIGIPIESQTLSVYGCELVDGLVMEDYDQ 60

Query: 61  FISEGSRIDLS-IHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQ 120
           FI+E SRIDLS + QIIAP NEFPI VEFSGQRINI++DKTETV SLKQKIQIIYGLPIQ
Sbjct: 61  FITEDSRIDLSVVDQIIAPSNEFPIAVEFSGQRININIDKTETVHSLKQKIQIIYGLPIQ 120

Query: 121 AMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSD---SPWRKVSFVVETSSS 180
            MSLF SG+ELGED +N+SEFGIG+FSEVIVF+KT +R LSD   S  + +SFVVETSSS
Sbjct: 121 TMSLFHSGMELGEDCQNVSEFGIGEFSEVIVFMKTTSRYLSDDSNSRRKMISFVVETSSS 180

Query: 181 LLNAACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDF 240
           LLNAACIPMEMKDSSTV DV+ELLL GKILPD+EYLFIHKQRIMR+K SLRWHGVENGDF
Sbjct: 181 LLNAACIPMEMKDSSTVKDVKELLLGGKILPDDEYLFIHKQRIMREKRSLRWHGVENGDF 240

Query: 241 LYVFKGTVSRAEFY 251
           LYVFKGTVSR EFY
Sbjct: 241 LYVFKGTVSRGEFY 254

[Close]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL
Match: A0A5D3C719 (Ubiquitin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004100 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111
Identity = 212/254 (83.46%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           M+IFIVTMGHEF I+I NQEQI+EIKRKIEQFIGIPIESQTLSVYGCELVDGL MEDYDQ
Sbjct: 1   MKIFIVTMGHEFPIEIGNQEQIIEIKRKIEQFIGIPIESQTLSVYGCELVDGLVMEDYDQ 60

Query: 61  FISEGSRIDLS-IHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQ 120
           FI+E SRIDLS + QIIAP NEFPI VEFSGQRINI++DKTETV SLKQKIQIIYGLPIQ
Sbjct: 61  FITEDSRIDLSVVDQIIAPSNEFPIAVEFSGQRININIDKTETVHSLKQKIQIIYGLPIQ 120

Query: 121 AMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSD---SPWRKVSFVVETSSS 180
            MSLF SG+ELGED +N+SEFGIG+FSEVIVF+KT +R LSD   S  + +SFVVETSSS
Sbjct: 121 TMSLFHSGMELGEDCQNVSEFGIGEFSEVIVFMKTTSRYLSDDSNSRRKVISFVVETSSS 180

Query: 181 LLNAACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDF 240
           LLNAACIPMEMKDSSTV DV+ELLL GKILPD+EYLFIHKQRIMR+K SLRWHGVENGDF
Sbjct: 181 LLNAACIPMEMKDSSTVKDVKELLLGGKILPDDEYLFIHKQRIMREKRSLRWHGVENGDF 240

Query: 241 LYVFKGTVSRAEFY 251
           LYVFKGTVSR EFY
Sbjct: 241 LYVFKGTVSRGEFY 254

[Close]

BLAST of Lsi11G014680.1 vs. NCBI nr
Match: XP_038887170.1 (uncharacterized protein LOC120077357 [Benincasa hispida])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 226/250 (90.40%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIFIV MGHEFAI+ISNQEQI+ IK KIEQFIGIPIESQTLSVYGCELVD L+MEDYDQ
Sbjct: 1   MEIFIVVMGHEFAIEISNQEQIIGIKSKIEQFIGIPIESQTLSVYGCELVDELNMEDYDQ 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FIS+GSRIDLSIHQIIAPPNEFPIT+EFSGQR NID+DKTETV SLKQKIQIIY +PIQ 
Sbjct: 61  FISDGSRIDLSIHQIIAPPNEFPITIEFSGQRQNIDIDKTETVHSLKQKIQIIYDIPIQT 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           MSLF SGVEL ED RNLSEFGIG+FSEVI+FLKTMNRCLSDSPW+KVSFVV+TSSSLLNA
Sbjct: 121 MSLFHSGVELSEDCRNLSEFGIGEFSEVILFLKTMNRCLSDSPWKKVSFVVKTSSSLLNA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTVSDVRELLLAGKILPD+EYLFIHKQRIMRDKCSLRWHGVENGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDDEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240

Query: 241 KGTVSRAEFY 251
           KGTVSR EFY
Sbjct: 241 KGTVSRGEFY 250

[Close]

BLAST of Lsi11G014680.1 vs. NCBI nr
Match: XP_022952137.1 (uncharacterized protein LOC111454902 [Cucurbita moschata])

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 216/249 (86.75%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKIEQFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIEQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI QIIAPPN FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQ+
Sbjct: 61  FISEGSRIDLSIDQIIAPPNNFPISVEFSGRQINIDIDKTETVHSLKQKIQIIYGTPIQS 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           MSLF SGVELGED+RNLSEFGI + SEV VFLKT +R LSD PWRKVSFVV+TSSSLLNA
Sbjct: 121 MSLFHSGVELGEDYRNLSEFGISESSEVTVFLKTTSR-LSDCPWRKVSFVVKTSSSLLNA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIHKQRIMRDKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHKQRIMRDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAEF 250
           KGTVS  EF
Sbjct: 241 KGTVSCGEF 247

[Close]

BLAST of Lsi11G014680.1 vs. NCBI nr
Match: XP_022968884.1 (uncharacterized protein LOC111468065 [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115
Identity = 213/248 (85.89%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKIEQFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIEQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI QIIAPPN FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQA
Sbjct: 61  FISEGSRIDLSIDQIIAPPNNFPISVEFSGRQINIDIDKTETVHSLKQKIQIIYGTPIQA 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           +SLF SGVELGED+RNLS+FGIG+ SEV VFLKTM+R LSD PWRKVSFVV+TSSSLL+A
Sbjct: 121 ISLFHSGVELGEDYRNLSDFGIGESSEVTVFLKTMSR-LSDCPWRKVSFVVKTSSSLLDA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIH+QRIM+DKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHEQRIMKDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAE 249
           KGTVS  E
Sbjct: 241 KGTVSCGE 246

[Close]

BLAST of Lsi11G014680.1 vs. NCBI nr
Match: XP_023554594.1 (uncharacterized protein LOC111811794 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115
Identity = 213/249 (85.54%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKI+QFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIQQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI Q+ APPN FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQ+
Sbjct: 61  FISEGSRIDLSIDQVTAPPNNFPISVEFSGRQINIDIDKTETVHSLKQKIQIIYGTPIQS 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           MSLF SGVEL ED+RNLS+FGIG+ SEV VFLKTM+R LSD PWRKVSFVV+TSSSLLNA
Sbjct: 121 MSLFHSGVELVEDYRNLSDFGIGESSEVTVFLKTMSR-LSDCPWRKVSFVVKTSSSLLNA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIHKQRIMRDKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHKQRIMRDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAEF 250
           KGTVS  EF
Sbjct: 241 KGTVSCGEF 247

[Close]

BLAST of Lsi11G014680.1 vs. NCBI nr
Match: KAG7011917.1 (ubi, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115
Identity = 215/249 (86.35%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MEIFIVTMGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQ 60
           MEIF+VT+GHEFAI+ISNQE++LEIKRKIEQFIGIPI+SQTLSVYGCELVDGLDMEDY Q
Sbjct: 1   MEIFVVTLGHEFAIEISNQERVLEIKRKIEQFIGIPIQSQTLSVYGCELVDGLDMEDY-Q 60

Query: 61  FISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQA 120
           FISEGSRIDLSI QIIAPP  FPI+VEFSG++INID+DKTETV SLKQKIQIIYG PIQ+
Sbjct: 61  FISEGSRIDLSIDQIIAPPKNFPISVEFSGRQINIDIDKTETVLSLKQKIQIIYGTPIQS 120

Query: 121 MSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNA 180
           MSLF SGVEL ED+RNLS+FGIG+ SEV VFLKTM+R LSD PWRKVSFVV+TSSSLLNA
Sbjct: 121 MSLFHSGVELIEDYRNLSDFGIGESSEVTVFLKTMSR-LSDCPWRKVSFVVKTSSSLLNA 180

Query: 181 ACIPMEMKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVF 240
           ACIPMEMKDSSTV DVRELLLAGKILPD++YLFIHKQRIMRDKCSLRWHGV+NGDFLYVF
Sbjct: 181 ACIPMEMKDSSTVGDVRELLLAGKILPDDDYLFIHKQRIMRDKCSLRWHGVQNGDFLYVF 240

Query: 241 KGTVSRAEF 250
           KGTVS  EF
Sbjct: 241 KGTVSCGEF 247

[Close]

BLAST of Lsi11G014680.1 vs. TAIR 10
Match: AT2G32350.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.2e-70
Identity = 127/243 (52.26%), Postives = 180/243 (74.07%), Query Frame = 0


Query: 14  IQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYDQFISEGSRIDLSIH 73
           ++IS QE +LE+K+++ QF+ IP  S TL V   EL+DGLD+EDY   IS G+RIDL++ 
Sbjct: 1   MEISEQESVLEVKKRLGQFLQIPTSSITLFVSCWELIDGLDIEDY-PIISHGTRIDLTVT 60

Query: 74  QIIAPPN-------EFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQAMSLFLS 133
            +   P+       +  +TV+F  ++  ++VD+TETV SLK KI I+   PI+ M L+ S
Sbjct: 61  PLFTAPSFIHAAVRKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYS 120

Query: 134 GVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLNAACIPME 193
           G+EL +D+RNL+E+GI +FSE++VFLK++NR    +P RK+ F+V+TSSSL N A IP+E
Sbjct: 121 GIELADDYRNLNEYGITEFSEIVVFLKSINRAKDVAPVRKLCFLVQTSSSLFNGARIPVE 180

Query: 194 MKDSSTVSDVRELLLAGKILPDEEYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSR 250
           +KD+ T+S++RE L A K LP +EY+F+HKQRIMR+ CSLRWHGVENGD L+VFKG++SR
Sbjct: 181 IKDTCTISEMREGLQANKTLPRDEYIFVHKQRIMRENCSLRWHGVENGDTLFVFKGSISR 240

[Close]

BLAST of Lsi11G014680.1 vs. TAIR 10
Match: AT4G05230.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 75/253 (29.64%), Postives = 110/253 (43.48%), Query Frame = 0


Query: 1   MEIFIVT-MGHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M++F  T  G  F I++   + +LEIK+KIE++  IP+  QTL   G  L D LD+E   
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQC- 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVEFSGQRINIDVDKTETVRSLKQKIQIIYGLPIQ 120
             I   SRI LS    I+ P++          R NI V KTE                  
Sbjct: 61  -VILNHSRIQLS----ISSPDQ---------SRNNIQVFKTEQFPQ-------------- 120

Query: 121 AMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKTMNRCLSDSPWRKVSFVVETSSSLLN 180
                           N +E       E  V +   N   +++P +K+  +V   S    
Sbjct: 121 ---------------SNSTEQTSNGHHESTVMIPMSNNNNNNNP-KKLRVMVLPKSGTRK 180

Query: 181 AACIPMEMKDSSTVSDVRELLLAGKI-------LPDEEYLFIHKQRIMRDKCSLRWHGVE 240
              IP+++     V ++R+ L   KI       LP E Y FI+KQ +M +  S RWH V+
Sbjct: 181 ---IPVDVNAGDNVGELRKEL--AKIQQRFQLSLPQEGYFFIYKQNVMDENRSFRWHRVD 203

Query: 241 NGDFLYVFKGTVS 246
            GD + +F G+VS
Sbjct: 241 QGDTIEIFNGSVS 203

[Close]

BLAST of Lsi11G014680.1 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-12
Identity = 56/214 (26.17%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + I  +K KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++T+ ++K KIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R L+++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 TIDN---VKAKIQDKEGIPPDQQRLIFAGKQLED 204

[Close]

BLAST of Lsi11G014680.1 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-12
Identity = 56/214 (26.17%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + I  +K KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++T+ ++K KIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R L+++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 TIDN---VKAKIQDKEGIPPDQQRLIFAGKQLED 204

[Close]

BLAST of Lsi11G014680.1 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-12
Identity = 56/214 (26.17%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 1   MEIFIVTM-GHEFAIQISNQEQILEIKRKIEQFIGIPIESQTLSVYGCELVDGLDMEDYD 60
           M+IF+ T+ G    +++ + + I  +K KI+   GIP + Q L   G +L DG  + DY+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  QFISEGSRIDLSIHQIIAPPNEFPITVE-FSGQRINIDVDKTETVRSLKQKIQIIYGLPI 120
                  + + ++H ++       I V+  +G+ I ++V+ ++T+ ++K KIQ   G+P 
Sbjct: 61  ------IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP 120

Query: 121 QAMSLFLSGVELGEDFRNLSEFGIGDFSEVIVFLKT---MNRCLSDSPWRKVSFVVETSS 180
               L  +G +L ED R L+++ I   S + + L+    M   +     + ++  VE+S 
Sbjct: 121 DQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 180

Query: 181 SLLNAACIPMEMKDSSTV-SDVRELLLAGKILPD 209
           ++ N   +  +++D   +  D + L+ AGK L D
Sbjct: 181 TIDN---VKAKIQDKEGIPPDQQRLIFAGKQLED 204

The following BLAST results are available for this feature:

BLAST of Lsi11G014680.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CG70	2.1e-12	27.10	Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]
P42740	3.7e-12	26.64	Polyubiquitin OS=Aglaothamnion neglectum OX=2765 PE=2 SV=2	[more]
P42739	4.8e-12	26.64	Polyubiquitin (Fragment) OS=Acetabularia peniculus OX=35862 PE=3 SV=2	[more]
Q8MKD1	8.2e-12	24.07	Polyubiquitin-B OS=Equus caballus OX=9796 GN=UBB PE=2 SV=3	[more]
P22589	8.2e-12	27.57	Polyubiquitin OS=Phytophthora infestans OX=4787 PE=1 SV=2	[more]

BLAST of Lsi11G014680.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJL4	1.3e-116	86.75	uncharacterized protein LOC111454902 OS=Cucurbita moschata OX=3662 GN=LOC1114549...	[more]
A0A6J1I0Y4	1.4e-115	85.89	uncharacterized protein LOC111468065 OS=Cucurbita maxima OX=3661 GN=LOC111468065...	[more]
A0A0A0K5K6	2.0e-114	86.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044280 PE=4 SV=1	[more]
A0A1S3C1K2	1.2e-111	83.46	uncharacterized protein LOC103495579 OS=Cucumis melo OX=3656 GN=LOC103495579 PE=...	[more]
A0A5D3C719	1.6e-111	83.46	Ubiquitin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Lsi11G014680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887170.1	2.0e-124	90.40	uncharacterized protein LOC120077357 [Benincasa hispida]	[more]
XP_022952137.1	2.6e-116	86.75	uncharacterized protein LOC111454902 [Cucurbita moschata]	[more]
XP_022968884.1	2.9e-115	85.89	uncharacterized protein LOC111468065 [Cucurbita maxima]	[more]
XP_023554594.1	2.9e-115	85.54	uncharacterized protein LOC111811794 [Cucurbita pepo subsp. pepo]	[more]
KAG7011917.1	2.9e-115	86.35	ubi, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi11G014680.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32350.1	5.2e-70	52.26	Ubiquitin-like superfamily protein	[more]
AT4G05230.1	1.4e-14	29.64	Ubiquitin-like superfamily protein	[more]
AT4G05320.2	4.9e-12	26.17	polyubiquitin 10	[more]
AT4G02890.1	4.9e-12	26.17	Ubiquitin family protein	[more]
AT4G05050.1	4.9e-12	26.17	ubiquitin 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 167..242 e-value: 7.4 score: 6.0 coord: 1..73 e-value: 2.5E-5 score: 33.7 coord: 82..153 e-value: 6.0E-4 score: 29.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 1.2E-9 score: 37.8 coord: 84..153 e-value: 7.7E-12 score: 44.8 coord: 179..239 e-value: 1.2E-4 score: 21.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 167..239 score: 9.177541
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..59 score: 11.485733
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 82..157 score: 13.314867
None	No IPR available	GENE3D	3.10.20.90		coord: 164..246 e-value: 3.8E-6 score: 28.5
None	No IPR available	GENE3D	3.10.20.90		coord: 1..72 e-value: 3.6E-10 score: 41.6 coord: 82..153 e-value: 6.8E-15 score: 56.8
None	No IPR available	PANTHER	PTHR10621:SF39	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..248
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 84..151 e-value: 3.75958E-10 score: 52.5986
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 3..70 e-value: 8.05152E-8 score: 46.4354
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 178..244
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 78..156
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..72

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G014680	Lsi11G014680	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G014680.1.exon.1	Lsi11G014680.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G014680.1.CDS.1	Lsi11G014680.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G014680.1	Lsi11G014680.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding