Lsi11G007920.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007920.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein CHLOROPLAST IMPORT APPARATUS 2
Location	chr11: 9260257 .. 9269321 (-)
Sequence length	2052
RNA-Seq Expression	Lsi11G007920.1
Synteny	Lsi11G007920.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGTAGTCCCCACAGGACTGCAGAAACTGAGCCTTGTCTCGTCTTGTGTTCTCTTCTATCTAGTAATCTCCATCGCCCAAACCGCAAGAACACTCGAAGAAGAAAGAGAGAAAAAAAAAAAAAAATAGAGAAAGAGAGAGAGAGAAATTTGTTTGTTTGTCTCTGCAGAAATGGCTATATGTACAGCACACCCAACGGATCTTTCCCTTTTATTATCTTCTTTCTCAACTTTCTCCTTACTTTCTTAAACTTTTCTCTCTGTTTTTCAGAAAAATTCAAGGTCTGTTTATATTTAGAAATCACAGTCTTTGGTTTTTCTTTATTGGGTTATTAAGTTTTTTTTTTTTTGTTTGGTGGATATTTCCCATTTCCATGGAACTTCCAAATTCCCTCTGGTTTTCTTGGGACAAGAGAGAAAAAAGAAAGTGAGATTTAGAAAAAACAGAGTAGTTTCAGGGGGGGTTTTTGTTTTGTTTTTTTTTTTTTCTTTCATGGTTTAGGGTTTAGGGTTTTGATCATCTTCTCAATTCCACCAAAATTTTCCAGGTTTCTGATGGAATTGAGTTTTCTTGTGTTTTCTCAGTAACCAAACAGAATTTACAGTGTGCTTTTCTTGTTTTTATTGTTGTTGTTGTGAATTTCAATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGTACGTCTCTCATCCCGCCACCGAAAATCAAAACCCAAGAAACTTTGAAAAAAAATAAAAATAAAAATCCTTCCCCCGGAGTTTTAGGAATCCAAATCTCTCTGTTACTGTTTCATTCTCCCCAAAAAAAGAAAAAAAAAAATCAAAACACAATTAGTAGTGTTAAATTTGCATTTTTTAGTCCTTGTTACTCTCAATAATTTTTTAGTTTTAAATTTTAGGTCAAATCTTATAAAATGTACTTCCCGTTACTAGATATCAATACTTTTTCATATGACAACGTGATTGAATGGTCCAAATAGAATATGTCAAGTAAGAAAACGGTTAACATGGTAAAGGTCTATACATTTTTTTTTGAAAAATATTTAGACTAGATTAACGTCATAAAAAAATTGTAGTAAGAATGTGAGGAATTAAAAACATTTTGACTTTCTTTTTAGAAAAAATAATGTGATTATGATTTTTTTTTAATTATTTTATTTGGACCATTGATAGATTTCCTTGTCAATGAGTCATTTTTCTCATGAAAAGAAAAAATCTAAAATGAAATTATAAAAAATAAAGGAAAAAAAAGGAATTTAACTATGGTGTTTAATCATGAGCCTCATGAAAGGGAGGGTAATATTATAAATTAAAAATTCTTTTTGTTGATCGATCCAGAATAAGCTTTAAAAACAAAACGAAATAGGGATATATAACTTTATTTCATGTGGAAAATGACGGAATTATCCTTGTTTATGAAGTAATTAAATTTCGTGCGAAGTAGGGGATAATGACTAAAAGGTGAGGATATTTTTGGAATTTGGCAGGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGTATGTATGTGAATCTGGTGCATCCACCCTCATCTGATTATAGTCTTTTTCTTTTTAGATTAAAATAACATTTTAGACTTCATATAATCATATTTGCGACTCATGTTATTTTAGTCTATATATTTTTAAATATTTAAATTTAATTCATATTTATCGACAAATCTTAAAATTAGTCTTTAGTAGTAGTTTAAAAATAATTTAGTAATTTGGACCATAAAATTTTTAATTTCATCAAATTTGATACTAAATTTATGTAAAGTACTGCAATTTTAATCTTTAATCTAATTTTAGTTAATTCACCTACTTATTTTAACAAAAGAGTTAAAATTCTTAACTCATTAATTTTAATAGAAATTTACACAAATGTATGTTGATCAAATAAAAAATTAACTATTAAATAACATTCTTAAAATTCATAAAATTCAGAAAAGAAAAACTCTAGTGTTGTTTTTCTCTAAATAAATTATCAATTTTATGTGGTATAAATGTTCTATTATTCATTAAATGCATGAGATACGCTCATATTTCCTTTTAGAAAATTGTTATCCATTTACATATTTATTATAAACTTTTAAAGATATGTTCACATATTATATTTCCTTGCATGAAAAAATAATCATTATTTAACTAATTTTATTAAAAATTAACTTCGAATTATTAAATTTAAGATATTTTTTAGTAATATTAAATTTAAGATTTATTAAAAGTAAAAAGACTAAAATTAGAAATTTAAAAATATAGTGACTAAAATTAAACCAACTCCAAAATAAAAAGTGATATTAACCTTTTTTCAAAATCTTGAGAATATGGTTCCTTCTGGCATTGAAATTTTTCCTTGTTTTATTTATTTATTGAGAATACACAAACCAAAACAAACTAATAGACACTATGCTCAACAATAAAAGAGAAATCACGCATAAACTCAGACAAGATCCGATTTAGAATGTGCTCCAACCATAAACAGCTATTCCCCAAAATTTCAGATTGAGCCAAAGAATGTGTTGTTTGATTAGAACTATGAGGCACATATTGAAAGAAAACAACAACGAAAGAAGCACAAAGGCTTCTAATCTCCGATAAAATGTTTGCTTCAATCTGATAAGATGAATCTCAACGAAGCATTTGAATAGATGCTAAAGAATCCGATAGAATACTGACCTTTTGTAAACCCAATCGTCCTGCTAAACAAAGACCTTTGAAAATTGCCTACTAATTCAGCACAAAGAGGACTTAGAGATTGATCCTGAAAACCCTTCAACGCAAATTTAATAACACCAGTTGAAGAATTAACAATCCCACCGAACCCCACTCTCCTCAAGCCCTCTCGACAGGCCGTATCCACTAGAACAACACACATATCATGTCCTGACAAGTCATACCGTAAGACATTCTGGTGAACCAAATTGAATTATCCTTTGGAGTAGAATTGAATTCAAAAATATATTCCTTTATCCATTCACACCACCTATCCATAGAAAAAATAGGAGAATTAAAACAAACATCATTTCGATCACTCTATATTGCCCAAGTAGTTATACAAGCTTGCACGAACTCCTGATTATTCAAATTAGCAATTAACAACAAACAAATATCCAAGCAATTAAATTTTTTAAACTAAGGATTCCACAAACCAGGAAAAAGAACATGCCAAATATTCCTTGCACGGGAACAACAAAATAAAGCATGTGAAACCGTTTCTTCCTTCCTCCTACTGACATTCATCATTCTTCTCTTGAACGACACTTTTGTGGGAAGACAATTATGGCAAGACTTCTACACAAAAATAGCAATCTTACAAGAAACTTGTAGCTTCCACAACATTTTTCACCAAGATAGATTATGGGCAGAGCAGGTACCATTTGTCAACAACCTATCCAAAATGGCACATTTCTAGCCACTTTTGACAGTATACTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCGAAGTTTCAAAGTGTTAAACCCAACTGTCCTCTCTTCCTGACACACTTAAAGGAATTTTAAGAACCTTTTCCACATCCACAGAAAAAAGACCTCCGCCAATTTATGATAGTCCCATTGGCCCAACGACGTGATGAAATCCGACACCAATGATCCCCATCTTGATGAGGATAGGATATAACTTTGAATTTCGCTGGTCTAGGGATCCAAGAATCCTTAAAGGCTTTTATTGTTTTCCCATTACCAATAGATTTCCTTAGACCTTTGACTAACACATCTCTGCTCCAACACAACCTTTTCCAAACATACAAACCAGATCTAGTCAACCGAGCATCCAAAATTGAACAAATCGGGAAATAACTTCCTTTTCACACTCTACTAACTAAAGAGGAGGGGTTTTGAATCACTCTCCACATTTGTTCGGCTAAAAGTGCTTGATTAAAAGCCTCAAGATTCCTAAAACTTAAGCCACCGAATTCCTTTGGAACAAAAGCTTTTCCTAGTGCATCTAGTGAATTTTCCTAAAGCCTTGAGAGGAACCCCACCAGAATCTAGCACTAACTTTCATAACTTCAATACATAAACTCTTTGGTAGATGAAAACAACTCATCACATAGGTAGGAATCGCTTGCACGACACTTTTAGTTAAAACTTCTTTGGCCCCTATGGACAAAAAGTTATCCTTCCAACCTTGCAAAGTAGCCCAAACACGGTCCAAAACCTGCTTAAAATCGTTCAATCATTCACCTTACTCCATGAGAAAAAAGCTGGAAAATCAAGATAAGAACCCAATCTGGGAACATTCCTAACATTCATAATAGTTCCCAAAAATTGCCTATAATCAAGACTAACATTAGGAGAGAACACCACTATAGACTTTGAAAAGTTGACACTCTGACCAGAAGCAAGCTTATAATCCTGTAATAACGTTTTTAAAGCTCTAAATTCTTGAGCCGTGGCTTTAAGAAAGATCAAACTATCATCCTCAAACAATAAAGGAGTGATAGAGTCACATAAATTTGAAACAGAGATACCAGACAAAAGGCCCCTATCATAAGCCTTATTAATTAATCTAGATAAACCTTCAGCACACAAAAGAAACAAATAAGGAGACAAAGGATCCCCTTATCTCAATCTTCTCGAAAGGAAGATAGATTCATGGGCCACTCCATTGATACAGATAGCAAAAATAGCCATAGTCACACATTTCATTACAAGTTCAACTCAGGAATGATGAATACCCACCTAAGCACAATTTGTTGGAGATAATCCCACTCAACTCTATCATACGTCTTACTCATATCGAGATTCAACACAATATATCCAACATTTTCTTTCTTCTTTTTCAGATAAGAGAGACATTCATGGCTTACAATAATATTATCACTAATAAGACGATCAAGAATAAAAGCAGACTGATTAACTTAGTATTATTAAGGACTACTTTCAATCTATTTGATTAAACTTTTGAGTCACACTTATAGATAACATTGCACAAACTAATAGATAAAAAGAATTTGTCATTGCTTTAAAGGCATAGAAAGTATTAGATTATTACTAGATTCTATTATTGTTATTAAAATGTGAGTAATGAGTTCAAGTAGAAAATGAGAGTATCTGTTTTTTTCAGCATCTTCTTGCAATTGATTTAGTTAGTTACATCAAAATGATCGTATTAATATATTATAGGATAAATATGCCACATTTTGCTAAATTTGAGTGTCTAGATTTTAAGAAAGATGTATAGTGTCTAAACCATGAGATTAGGCTTAAGTTCAATTGTTAAATATATGTTTTTGTCTCTATAATTTTTTTTTTGAAAAAATATTTATTGGTCTCTAAATTTTGAAATTAATTTTCATTTGGTTCTTATGCTTCAAAATGTTTACATTTAATTTTTAAATTTTGAGTTTGGTTTCAATTTAATCCATAGGTTTCATAATGTTACAATTTTACCCTTAGGATTAGGATTTAAGTTTTATTTTAATTGAATTCGTAGGTTTCAAGATTCACACTTTCAACCTCAATTTTTCATTAAATACATATTTTCATTCATTGGTCCTAATGTTGATTAATTAATTAAAAATAGTTATGAACTAAAATTTTAAATTTAATTTTGGTAGTGATGAAAATTAGTAAAAATTAGTTGATTATAGTTATTTTAAATTAATTAATAAATATTAGTGCTAATGTCTAAAAGTGAGTATCTAGTATAAAATTTAAGTTAAAAGTGTAAATATGAAACCTAGATACCAAATTGAAACAAAACTCAAATTTAAGGGTAAAATTGTTACATTTTGAAACCTAAAAACTAAATTGAAACCAAACTCAAAACTTAAGGATTAAATGTGTAATATTTTGAAACCTAGATACCAAATGTAAATTACACTGAAAATCTAGAGACCAAAAATATTTTCAGATATAGCAACGTACAAGGAACTAATATATATATATATATATATATATATATATATATATTGAGTAGTTGTTTAAAATGACAAAATTGCTAGAAATATTTTTAAATATAGCAAAATGTCACTATCTATCAGTGATAGATTGTGATAGACATCTATCAGTGTCTATCAGGGTAGATGATAATAGTCTATTAATAATAAAATGACATTTTGCTATATTTATAAATATTTCGATTCATTTTGCTATATTTAAAAACAAAAGACTCTTTGACTTATATTATACATCAGTTGCTTAAAATCAAATTAGCCTAAAAAATGTTTTTAATAGTAGTTTAATAATAACACTCAAATGATTAAATTAGGGCTTTTTTAACTTTCAAAACCAAATTTAAAATTAGAATAAACTTTAGGATTCACAAAATTACAAAACTATTTTGGTTTATTTGTACTCTTAGTCATTTTAATCCACATACTTTCAATTTTTTTTTTCTTTCTTCACTTTAGCTTTTATATTTTCAAAACATCAATTTTCTTTACAGCATATTGTTTAAGATGGACCATTTTCATTCATATTTGCAAAACTTTTAACTCCAATTTTATACTCAATGAAAATTCTTTAATACAAAATTTACGATTGCATTTTAAGTAATGTAGTGATTAAAGTATTATGCTAAAATTTTGATTGATGAAAAAGAAAACAAAGAGACAAAAACAATCACTTCTTAAAAGTAAAATGGTCCAAAATAGATGTTTTAAAAGTATACGAACTAAAATGAACAAAAGTTAAAAGTATAGACATAAAAATTGACATTTTAAAAGTACGAGAACAAAAATTGTACTAAAATCAAACCATAGATTATATTTCCACATTGCTAGTGCCTAACATAATTTAACTAGTCAGAATAATTTTAAGAGCAAGGTTTAAATTGATATAGTTTAAATTTAAACCCTAAACTTATAATTATATCAATATAAACTCTGAACTTTTATAAGTGTGTCAATTTAAACCTCAAAACTAATAATTGTATCAATTTAAACCTTGAACTTTCATAAGTGTATCAGTTTAAACCCTTTATCGTGTTTTATTTGGATATGCTTATTAAAATTTAAGGTTTAAATTGATATAGTTTAAATTAATATACTTATACGAAAGTTTAAAATTTAATTGATAAATTATTAGTCAGGGATATAAATTTTTATTATGAGTTAGAAAAATTTGAGTATTAATAGAAAGAGATGATTGAAAAGACGTTTTCCTTTTGGCAGGGGCGATTTGTGAGGAGGCCTAATTCAAGTGCCAGCGAAAAGAGATAGACAGTAGCCTTTAGGATTCAGAAATCCCCTTTTTGAGTTGTCAACTTCACTTTTTTGGGAGCTACTTTTTTGCTTTCTTGATCTAATTATTATCACTTTTTCTTTTCTCTTTTATTTTGCATTATATTTTCCAAA

mRNA sequence

GTTAGTAGTCCCCACAGGACTGCAGAAACTGAGCCTTGTCTCGTCTTGTGTTCTCTTCTATCTAGTAATCTCCATCGCCCAAACCGCAAGAACACTCGAAGAAGAAAGAGAGAAAAAAAAAAAAAAATAGAGAAAGAGAGAGAGAGAAATTTGTTTGTTTGTCTCTGCAGAAATGGCTATATGTACAGCACACCCAACGGATCTTTCCCTTTTATTATCTTCTTTCTCAACTTTCTCCTTACTTTCTTAAACTTTTCTCTCTGTTTTTCAGAAAAATTCAAGGTCTGTTTATATTTAGAAATCACAGTCTTTGGTTTTTCTTTATTGGGTTATTAAGTTTTTTTTTTTTTGTTTGGTGGATATTTCCCATTTCCATGGAACTTCCAAATTCCCTCTGGTTTTCTTGGGACAAGAGAGAAAAAAGAAAGTGAGATTTAGAAAAAACAGAGTAGTTTCAGGGGGGGTTTTTGTTTTGTTTTTTTTTTTTTCTTTCATGGTTTAGGGTTTAGGGTTTTGATCATCTTCTCAATTCCACCAAAATTTTCCAGGTTTCTGATGGAATTGAGTTTTCTTGTGTTTTCTCAGTAACCAAACAGAATTTACAGTGTGCTTTTCTTGTTTTTATTGTTGTTGTTGTGAATTTCAATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGGGCGATTTGTGAGGAGGCCTAATTCAAGTGCCAGCGAAAAGAGATAGACAGTAGCCTTTAGGATTCAGAAATCCCCTTTTTGAGTTGTCAACTTCACTTTTTTGGGAGCTACTTTTTTGCTTTCTTGATCTAATTATTATCACTTTTTCTTTTCTCTTTTATTTTGCATTATATTTTCCAAA

Coding sequence (CDS)

ATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGGGCGATTTGTGAGGAGGCCTAATTCAAGTGCCAGCGAAAAGAGATAG

Protein sequence

MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAESILDEEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASEKR

Homology

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BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 5.3e-72
Identity = 209/454 (46.04%), Postives = 268/454 (59.03%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 419
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 421

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-14
Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 305 KSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIP---------------GSDT 364
           K EK EK +        L+L+YE+V   W  +G P++  +P               G   
Sbjct: 281 KEEKKEKAL-------MLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESG 340

Query: 365 AGSDVNARLAQIDL-FSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 415
           A +  +     + L   D G   REA V RY+EKRRTRLFSKKIRY+VRK+NA+ RPRMK
Sbjct: 341 AEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 399

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 61/139 (43.88%), Postives = 76/139 (54.68%), Query Frame = 0


Query: 293 ESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP-----G 352
           E ++A       K    E    K + T  FL+L+Y AV  AW + GSP+   I      G
Sbjct: 249 EEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLG 308

Query: 353 SDTAGSDVNARLAQI---------DLFSDGGGL--LREASVLRYKEKRRTRLFSKKIRYQ 412
            +T    V     ++             DGGG    REA VLRYKEKRRTRLFSKKIRY+
Sbjct: 309 GNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYE 368

Query: 413 VRKVNADGRPRMKGRFVRR 415
           VRK+NA+ RPR+KGRFV+R
Sbjct: 369 VRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 5.6e-13
Identity = 59/158 (37.34%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 282 KKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFS 341
           K  + E +  +ES    +   KE+  K+            L+LNY++V   W  +G P+S
Sbjct: 264 KTSEEEVMKNVESSGECVVKVKEEEHKN---------VLMLRLNYDSVISTWGGQGPPWS 323

Query: 342 DEIP-------------------GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEK 401
              P                   G  T              F DGG   REA V RY+EK
Sbjct: 324 SGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG---REARVSRYREK 383

Query: 402 RRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAS 421
           RRTRLFSKKIRY+VRK+NA+ RPRMKGRFV+R + +A+
Sbjct: 384 RRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAAA 409

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-11
Identity = 49/109 (44.95%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 306 SEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFS 365
           SEK+E+     +     +LNYE V  AW  + SP        D   +  + +L    +  
Sbjct: 212 SEKTEEIEDCYENNARHRLNYENVIAAWDKQESP-------RDVKNNTSSFQLVPPGIEE 271

Query: 366 DGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGRFVRR 415
                 REA V RY++KR+ RLF KKIRY+VRKVNAD RPRMKGRFVRR
Sbjct: 272 KRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL
Match: A0A1S3BQX8 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.2e-209
Identity = 397/437 (90.85%), Postives = 405/437 (92.68%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

Query: 421 RMKGRFVRRPNSSASEK 423
           RMKGRFVRRPNSS   K
Sbjct: 421 RMKGRFVRRPNSSGHRK 435

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL
Match: A0A0A0LGV4 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.2e-207
Identity = 395/437 (90.39%), Postives = 405/437 (92.68%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEI+KSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLEKGNSTQDSCV  NNHPRNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPTPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQK   EKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQK---EKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420
            SDTAGSDVNAR+A IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

Query: 421 RMKGRFVRRPNSSASEK 423
           RMKGRFVRRPNSS   K
Sbjct: 421 RMKGRFVRRPNSSGYRK 432

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL
Match: A0A1S3BQD2 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.3e-203
Identity = 386/423 (91.25%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 409
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL
Match: A0A6J1K6B9 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Cucurbita maxima OX=3661 GN=LOC111492075 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 2.1e-188
Identity = 364/425 (85.65%), Postives = 382/425 (89.88%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSS-NNTQLAISTRKSRTP 60
           MSSPCISGGGRAY+FDLEIVKSPSSSWTRTSQ+SSPSSTLS+SS NNTQLAISTRKSRTP
Sbjct: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRTSQSSSPSSTLSESSNNNTQLAISTRKSRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSG 120
           RKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSH DSLF +SAELLLPFR IDSS 
Sbjct: 61  RKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSH-DSLFSDSAELLLPFRGIDSSE 120

Query: 121 FLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAESILDEEIEEG 180
           FL+HQPL  EKPNSQ  SKL NLWENRPCSSPGE+DFQP+ ME+EDFDAESILDEEIEEG
Sbjct: 121 FLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEG 180

Query: 181 IDSIMGNLSVDNLEKGNSTQDSCVNNHPRNWNCYWNPIGL-GFNQKFESGFGMRKGIERT 240
           IDSI+GNL VDNLE G+S QDSC NNHP NWNC WNPIGL GFNQKFESG+    GIERT
Sbjct: 181 IDSILGNLCVDNLETGDSVQDSCANNHPWNWNCCWNPIGLGGFNQKFESGY----GIERT 240

Query: 241 AIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIESKKAA 300
           AIR VDNGNWWRFPTVDVVEISPKLNPKPPA    P+AVATKKKKKKVEKLTVIESKKAA
Sbjct: 241 AIREVDNGNWWRFPTVDVVEISPKLNPKPPA----PSAVATKKKKKKVEKLTVIESKKAA 300

Query: 301 MPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARL 360
           M  +K   EKSEKPIPK      LKLNYEAVADAWS+RGSPFSDE P SDTAGSDVNARL
Sbjct: 301 MAPEK---EKSEKPIPKGL---VLKLNYEAVADAWSNRGSPFSDEFPASDTAGSDVNARL 360

Query: 361 AQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSS 420
           A IDLFSDGGG LREASVLRYKEK+RTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSS
Sbjct: 361 ALIDLFSDGGGFLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSS 408

Query: 421 ASEKR 424
           AS++R
Sbjct: 421 ASQQR 408

[Close]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL
Match: A0A6J1D908 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC111018157 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 6.1e-188
Identity = 367/433 (84.76%), Postives = 381/433 (87.99%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SS NTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESS-NTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLST YPNVFSTKHLTNPRKFTK H DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEI-------EDFDAESILD 180
           LLHQPLLQEKPNSQ Q+KL NLWE RPCSSPGEIDFQPN MEI       +DFDAESILD
Sbjct: 121 LLHQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESILD 180

Query: 181 EEIEEGIDSIMGNLSVDNLEKGNSTQD-SCVNNHPRNWNCYWN--PIGLGFNQKFESGFG 240
           EEIEEGIDSIMGNLSVDNLE  NS QD SC N  PRNWNCYWN  PIGLG NQKFE GFG
Sbjct: 181 EEIEEGIDSIMGNLSVDNLETANSPQDYSCTN--PRNWNCYWNNPPIGLGLNQKFEFGFG 240

Query: 241 MRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLT 300
           M+K  ER AIR V++GNWWRFPTVDVVEISPKLN KPPA    PAAV+TKKKKKK+EKLT
Sbjct: 241 MQKATERAAIRQVEDGNWWRFPTVDVVEISPKLN-KPPA----PAAVSTKKKKKKMEKLT 300

Query: 301 VIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           VIE+KKAA   QK+     +KP PKSKP   LKLNYEAVADAWS RGSPFSDEIPGSDTA
Sbjct: 301 VIETKKAATIPQKD-----QKPTPKSKPGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGR 420
           G+DVN RLAQ+DLF D GGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNAD RPRMKGR
Sbjct: 361 GNDVNTRLAQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADERPRMKGR 419

Query: 421 FVRRPNSSASEKR 424
           FVRRPNSSASE+R
Sbjct: 421 FVRRPNSSASEQR 419

[Close]

BLAST of Lsi11G007920.1 vs. NCBI nr
Match: XP_038890141.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 766.5 bits (1978), Expect = 1.2e-217
Identity = 408/433 (94.23%), Postives = 414/433 (95.61%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGR 420
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGR
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGR 420

Query: 421 FVRRPNSSASEKR 424
           FVRRPNSSASEKR
Sbjct: 421 FVRRPNSSASEKR 432

[Close]

BLAST of Lsi11G007920.1 vs. NCBI nr
Match: XP_038890140.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 741.9 bits (1914), Expect = 3.1e-210
Identity = 394/419 (94.03%), Postives = 400/419 (95.47%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKG 410
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKG
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKG 418

[Close]

BLAST of Lsi11G007920.1 vs. NCBI nr
Match: XP_038890142.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 739.6 bits (1908), Expect = 1.5e-209
Identity = 393/418 (94.02%), Postives = 399/418 (95.45%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 417

[Close]

BLAST of Lsi11G007920.1 vs. NCBI nr
Match: XP_038890143.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X4 [Benincasa hispida])

HSP 1 Score: 739.6 bits (1908), Expect = 1.5e-209
Identity = 393/418 (94.02%), Postives = 399/418 (95.45%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 417

[Close]

BLAST of Lsi11G007920.1 vs. NCBI nr
Match: XP_008451201.1 (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 738.0 bits (1904), Expect = 4.5e-209
Identity = 397/437 (90.85%), Postives = 405/437 (92.68%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

Query: 421 RMKGRFVRRPNSSASEK 423
           RMKGRFVRRPNSS   K
Sbjct: 421 RMKGRFVRRPNSSGHRK 435

[Close]

BLAST of Lsi11G007920.1 vs. TAIR 10
Match: AT5G57180.2 (chloroplast import apparatus 2 )

HSP 1 Score: 273.1 bits (697), Expect = 3.8e-73
Identity = 209/454 (46.04%), Postives = 268/454 (59.03%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 419
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 421

[Close]

BLAST of Lsi11G007920.1 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 259.6 bits (662), Expect = 4.3e-69
Identity = 185/423 (43.74%), Postives = 248/423 (58.63%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEAT 71
           AY+F+LE++KSP S     + T SPSST+S+ +N+   +ISTR+ RTPRKRPNQTY+EA 
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDEAA 64

Query: 72  VLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKP 131
            LLSTAYP +FS+K        T     S + E+++LLLP+  I+ + FL          
Sbjct: 65  ALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF--------- 124

Query: 132 NSQTQSKLTNLWENRPCSSPGEIDFQPN-LMEIEDFDAESILDEEIEEGIDSIMGNLSVD 191
           N    +K  +  E +  S     D + N    ++DFDAESILDEEIEEGIDS MGN+  +
Sbjct: 125 NPTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNIESN 184

Query: 192 NLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWR 251
           + ++ N  +   +    +N           +N +F  G G+     R+++R  ++ NWW+
Sbjct: 185 DGDRENCYRVGRLEEIMKN----------AWNGRFRLGLGL-----RSSLRQNNDENWWK 244

Query: 252 FPTVDVVEISPKLNPKPPAPAPS--------------PAAVATKKKKKKVEKLTVIESKK 311
           FPTV+  +ISP++     A A                  A   KKKKKK +K      KK
Sbjct: 245 FPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKK------KK 304

Query: 312 AAMPLQKEKSEKSEKPIPK--SKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDV 371
            A    + KS +     PK   + +  LKL+Y+ V +AWS + SPFSDEI GSD  G D 
Sbjct: 305 VAPAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDF 364

Query: 372 NARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGRFVRR 418
           + RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQVRK+NAD RPRMKGRFVRR
Sbjct: 365 HVRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 386

[Close]

BLAST of Lsi11G007920.1 vs. TAIR 10
Match: AT5G57180.1 (chloroplast import apparatus 2 )

HSP 1 Score: 255.8 bits (652), Expect = 6.3e-68
Identity = 200/444 (45.05%), Postives = 259/444 (58.33%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 409
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 419

[Close]

BLAST of Lsi11G007920.1 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 249.6 bits (636), Expect = 4.5e-66
Identity = 185/438 (42.24%), Postives = 248/438 (56.62%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEAT 71
           AY+F+LE++KSP S     + T SPSST+S+ +N+   +ISTR+ RTPRKRPNQTY+EA 
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDEAA 64

Query: 72  VLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKP 131
            LLSTAYP +FS+K        T     S + E+++LLLP+  I+ + FL          
Sbjct: 65  ALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF--------- 124

Query: 132 NSQTQSKLTNLWENRPCSSPGEIDFQPN-LMEIEDFDAESILDEEIEEGIDSIMGNLSVD 191
           N    +K  +  E +  S     D + N    ++DFDAESILDEEIEEGIDS MGN+  +
Sbjct: 125 NPTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNIESN 184

Query: 192 NLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWR 251
           + ++ N  +   +    +N           +N +F  G G+     R+++R  ++ NWW+
Sbjct: 185 DGDRENCYRVGRLEEIMKN----------AWNGRFRLGLGL-----RSSLRQNNDENWWK 244

Query: 252 FPTVDVVEISPKLNPKPPAPAPS--------------PAAVATKKKKKKVEKLTVIESKK 311
           FPTV+  +ISP++     A A                  A   KKKKKK +K      KK
Sbjct: 245 FPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKK------KK 304

Query: 312 AAMPLQKEKSEKSEKPIPK--SKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDV 371
            A    + KS +     PK   + +  LKL+Y+ V +AWS + SPFSDEI GSD  G D 
Sbjct: 305 VAPAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDF 364

Query: 372 NARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK------ 418
           + RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQVRK+NAD RPRMK      
Sbjct: 365 HVRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKVKDWHC 401

[Close]

BLAST of Lsi11G007920.1 vs. TAIR 10
Match: AT5G57180.3 (chloroplast import apparatus 2 )

HSP 1 Score: 177.2 bits (448), Expect = 2.8e-44
Identity = 156/397 (39.29%), Postives = 213/397 (53.65%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

The following BLAST results are available for this feature:

BLAST of Lsi11G007920.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU68	5.3e-72	46.04	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q8LG76	2.3e-14	42.86	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	1.1e-13	43.88	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8RWD0	5.6e-13	37.34	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9M9B3	1.1e-11	44.95	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of Lsi11G007920.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQX8	2.2e-209	90.85	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LGV4	1.2e-207	90.39	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV...	[more]
A0A1S3BQD2	2.3e-203	91.25	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1K6B9	2.1e-188	85.65	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Cucurbita maxima OX=3661 GN=LOC1114920...	[more]
A0A6J1D908	6.1e-188	84.76	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi11G007920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890141.1	1.2e-217	94.23	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida]	[more]
XP_038890140.1	3.1e-210	94.03	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida]	[more]
XP_038890142.1	1.5e-209	94.02	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X3 [Benincasa hispida]	[more]
XP_038890143.1	1.5e-209	94.02	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X4 [Benincasa hispida]	[more]
XP_008451201.1	4.5e-209	90.85	PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo]	[more]

BLAST of Lsi11G007920.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57180.2	3.8e-73	46.04	chloroplast import apparatus 2	[more]
AT4G25990.1	4.3e-69	43.74	CCT motif family protein	[more]
AT5G57180.1	6.3e-68	45.05	chloroplast import apparatus 2	[more]
AT4G25990.2	4.5e-66	42.24	CCT motif family protein	[more]
AT5G57180.3	2.8e-44	39.29	chloroplast import apparatus 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 372..414 e-value: 9.6E-18 score: 64.0
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 372..414 score: 15.784945
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..54
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..418
None	No IPR available	PANTHER	PTHR31874:SF10	OS02G0148000 PROTEIN	coord: 1..418

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G007920	Lsi11G007920	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007920.1.exon.1	Lsi11G007920.1.exon.1	exon
Lsi11G007920.1.exon.2	Lsi11G007920.1.exon.2	exon
Lsi11G007920.1.exon.3	Lsi11G007920.1.exon.3	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007920.1.three_prime_UTR.1	Lsi11G007920.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007920.1.CDS.3	Lsi11G007920.1.CDS.3	CDS
Lsi11G007920.1.CDS.2	Lsi11G007920.1.CDS.2	CDS
Lsi11G007920.1.CDS.1	Lsi11G007920.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007920.1.five_prime_UTR.1	Lsi11G007920.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G007920.1	Lsi11G007920.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding