Lsi11G007710.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007710.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription factor bHLH146-like
Location	chr11: 8812825 .. 8813331 (-)
Sequence length	507
RNA-Seq Expression	Lsi11G007710.1
Synteny	Lsi11G007710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

mRNA sequence

ATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Coding sequence (CDS)

ATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Protein sequence

MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

Homology

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-06
Identity = 53/167 (31.74%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           +F R Y  +L+ +L K++      + + ++ VK EVDMA+ALSA+EFAW     + LLQ+
Sbjct: 24  VFTRKYTSHLVPALKKLN----MNKNSSKQTVKHEVDMALALSAQEFAW----SRFLLQK 83

Query: 61  EVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKLR 120
             S+ N           T   S  + G    E  ++E   EE   EE        L++L+
Sbjct: 84  LSSSSN----------PTTTTSSSSDGIRILERPDKEGGNEEGGIEER-------LRELK 143

Query: 121 KIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           K++PGG++ N+        ++L +  +Y+KCLELQ   L+ +V+ +T
Sbjct: 144 KLLPGGEEMNV-------EEMLSEIGNYIKCLELQTIALKSIVQDST 158

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.1e-51
Identity = 132/174 (75.86%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           MFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEVDMAMA SA EF+WGIALKKKLLQR
Sbjct: 24  MFARNYVKHLMTSLVKIS--HQQQQQNFQKLVRFEVDMAMAQSASEFSWGIALKKKLLQR 83

Query: 61  EVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGL 120
           +      GNG+EN FDFSLQT+ K S +N G EE++  E+EEEEEEEEEEE    ME+GL
Sbjct: 84  DDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHHEDEEEEEEEEEEE----MENGL 143

Query: 121 KKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 169
            KLRKIIPGGDDF+IG  +L+E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 144 MKLRKIIPGGDDFSIGGNNLDEED-DLLKQTESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 127/170 (74.71%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           MF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEVDMAMA SA EF+WGIALKKKLLQR
Sbjct: 24  MFERNYVKHLMTSLVKIS--HQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQR 83

Query: 61  EVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKK 120
           +    GNGNEN FDFS+QTV K SQEN G EE++   EEEEEEEEE       ME+GL K
Sbjct: 84  DQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHEEEEEEEEE-------MENGLMK 143

Query: 121 LRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 169
           LRKIIPGGD+F+IG   +++ DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 144 LRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 119/168 (70.83%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQ 60
           MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQ
Sbjct: 24  MFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQ 83

Query: 61  REVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKL 120
           RE  NG+   N F  SLQ VKFS+EN         E E+EE EE EE EE+K+E+GL KL
Sbjct: 84  REDGNGS---NGFGLSLQRVKFSRENL--------EREDEEHEEREEHEERKIENGLMKL 143

Query: 121 RKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           RKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 144 RKIVPGGSN---GELEED--DLFKQTESYIKCLELQVNVLRCLVDTNT 175

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.3e-44
Identity = 121/168 (72.02%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQ-QQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQ 60
           MFARNYVKYLMTSL KISHHHQQ QQ+NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQ
Sbjct: 24  MFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQ 83

Query: 61  REVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKL 120
           RE  NG+   N F FSL  VKFS+EN      E E+EE EE EE EE EE+K+E+GL KL
Sbjct: 84  REDDNGS---NGFGFSL-PVKFSRENL-----EREDEEHEEHEEHEEREERKIENGLMKL 143

Query: 121 RKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           RKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 144 RKIVPGGSN---GELEED--DLFKQTESYIKCLELQVNVLRCLVDTNT 177

[Close]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 3.8e-40
Identity = 112/170 (65.88%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           MFARNY K LM SL KIS +HQ    N QK+VKFEVDMAMALSA EFAWG ALK+KLLQ+
Sbjct: 24  MFARNYAKNLMASLSKISPNHQ----NLQKVVKFEVDMAMALSASEFAWGHALKQKLLQK 83

Query: 61  EVSNGNGN-ENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKL 120
           +  NGNGN  N FDFSLQT+KFS+                E+EEEEEE++KKME+GL KL
Sbjct: 84  Q-ENGNGNGRNSFDFSLQTLKFSR----------------EKEEEEEEDKKKMENGLVKL 143

Query: 121 RKIIPGGDDFN--IGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           RKI+PGG++ N   GDL E+D DLLKQTESY+KCLELQVNVLR LV+TNT
Sbjct: 144 RKILPGGENNNDSNGDLLEED-DLLKQTESYIKCLELQVNVLRCLVDTNT 171

[Close]

BLAST of Lsi11G007710.1 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida])

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-53
Identity = 132/173 (76.30%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISH----HHQQQQENFQKLVKFEVDMAMALSAR-EFAWGIALKK 60
           MFARNYVK+LMTSLVKISH    HHQQQ++NFQK VKFEVDMAMA SA  +FAWGIALKK
Sbjct: 25  MFARNYVKHLMTSLVKISHHHHQHHQQQEQNFQKFVKFEVDMAMAQSASDQFAWGIALKK 84

Query: 61  KLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHG 120
           KLLQR+     GNENDFDFSLQTVKFSQEN GK            EEEEE EEEKKMEHG
Sbjct: 85  KLLQRDQV---GNENDFDFSLQTVKFSQENLGK------------EEEEEAEEEKKMEHG 144

Query: 121 LKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 169
           L KLRKIIPGG DFNI     +D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 145 LMKLRKIIPGGADFNI-----EDDDLLKQTESYVKCLELQVNVLRGLVETNTF 177

[Close]

BLAST of Lsi11G007710.1 vs. NCBI nr
Match: XP_016901419.1 (PREDICTED: uncharacterized protein At4g30180 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 4.4e-51
Identity = 132/174 (75.86%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           MFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEVDMAMA SA EF+WGIALKKKLLQR
Sbjct: 24  MFARNYVKHLMTSLVKIS--HQQQQQNFQKLVRFEVDMAMAQSASEFSWGIALKKKLLQR 83

Query: 61  EVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGL 120
           +      GNG+EN FDFSLQT+ K S +N G EE++  E+EEEEEEEEEEE    ME+GL
Sbjct: 84  DDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHHEDEEEEEEEEEEE----MENGL 143

Query: 121 KKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 169
            KLRKIIPGGDDF+IG  +L+E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 144 MKLRKIIPGGDDFSIGGNNLDEED-DLLKQTESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of Lsi11G007710.1 vs. NCBI nr
Match: XP_011648935.1 (transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein Csa_021305 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-50
Identity = 127/170 (74.71%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           MF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEVDMAMA SA EF+WGIALKKKLLQR
Sbjct: 24  MFERNYVKHLMTSLVKIS--HQQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQR 83

Query: 61  EVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKK 120
           +    GNGNEN FDFS+QTV K SQEN G EE++   EEEEEEEEE       ME+GL K
Sbjct: 84  DQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHEEEEEEEEE-------MENGLMK 143

Query: 121 LRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 169
           LRKIIPGGD+F+IG   +++ DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 144 LRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of Lsi11G007710.1 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-44
Identity = 119/168 (70.83%), Postives = 129/168 (76.79%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQ 60
           MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQ
Sbjct: 24  MFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQ 83

Query: 61  REVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKL 120
           RE  NG+   N F FSLQTVKFSQEN            E E EE EE +E K+E+GL KL
Sbjct: 84  REDGNGS---NGFGFSLQTVKFSQENL-----------EREHEEHEERKEPKIENGLMKL 143

Query: 121 RKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           RKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 144 RKIVPGGSN---GELEED--DLFKQTESYIKCLELQVNVLRCLVDTNT 172

[Close]

BLAST of Lsi11G007710.1 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44
Identity = 119/168 (70.83%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQ 60
           MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQ
Sbjct: 24  MFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQ 83

Query: 61  REVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKL 120
           RE  NG+   N F  SLQ VKFS+EN         E E+EE EE EE EE+K+E+GL KL
Sbjct: 84  REDGNGS---NGFGLSLQRVKFSRENL--------EREDEEHEEREEHEERKIENGLMKL 143

Query: 121 RKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           RKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 144 RKIVPGGSN---GELEED--DLFKQTESYIKCLELQVNVLRCLVDTNT 175

[Close]

BLAST of Lsi11G007710.1 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-13
Identity = 62/170 (36.47%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKL---VKFEVDMAMALSAREFAWGIALKKKL 60
           +FAR YV +L+ +L KI+ +    + N Q L   VK EVDMA ALSA+EFAW   L++KL
Sbjct: 24  VFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVKHEVDMAFALSAQEFAWSRFLQQKL 83

Query: 61  LQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLK 120
           L           + +D  + T     E   +  + +  E+ ++ +EEEE  E K    LK
Sbjct: 84  L----------SSPYDDPISTSSSPSEILERSSKRQGGEKHQDSDEEEEGGEIKKR--LK 143

Query: 121 KLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           +L+K++PGG++ N+        ++L +  SY+ CLELQ+ VL+ +V+ NT
Sbjct: 144 ELQKLLPGGEEMNM-------EEILSEIGSYIVCLELQMIVLKSIVQDNT 174

[Close]

BLAST of Lsi11G007710.1 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 52.0 bits (123), Expect = 5.4e-07
Identity = 53/167 (31.74%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 1   MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQR 60
           +F R Y  +L+ +L K++      + + ++ VK EVDMA+ALSA+EFAW     + LLQ+
Sbjct: 24  VFTRKYTSHLVPALKKLN----MNKNSSKQTVKHEVDMALALSAQEFAW----SRFLLQK 83

Query: 61  EVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEKKMEHGLKKLR 120
             S+ N           T   S  + G    E  ++E   EE   EE        L++L+
Sbjct: 84  LSSSSN----------PTTTTSSSSDGIRILERPDKEGGNEEGGIEER-------LRELK 143

Query: 121 KIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT 168
           K++PGG++ N+        ++L +  +Y+KCLELQ   L+ +V+ +T
Sbjct: 144 KLLPGGEEMNV-------EEMLSEIGNYIKCLELQTIALKSIVQDST 158

The following BLAST results are available for this feature:

BLAST of Lsi11G007710.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	7.7e-06	31.74	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]

BLAST of Lsi11G007710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZN3	2.1e-51	75.86	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]
A0A0A0LJA7	1.4e-50	74.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]
A0A6J1FJ33	1.1e-44	70.83	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	4.3e-44	72.02	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A6J1DIU0	3.8e-40	65.88	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]

BLAST of Lsi11G007710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877916.1	2.8e-53	76.30	transcription factor bHLH146-like [Benincasa hispida]	[more]
XP_016901419.1	4.4e-51	75.86	PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]	[more]
XP_011648935.1	2.9e-50	74.71	transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein ...	[more]
XP_023538247.1	1.1e-44	70.83	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938205.1	2.3e-44	70.83	transcription factor bHLH146-like [Cucurbita moschata]	[more]

BLAST of Lsi11G007710.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18969.1	8.7e-13	36.47	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT4G30180.1	5.4e-07	31.74	sequence-specific DNA binding transcription factors;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..115
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 1..167
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 1..167

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G007710	Lsi11G007710	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007710.1.exon.1	Lsi11G007710.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G007710.1.CDS.1	Lsi11G007710.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G007710.1	Lsi11G007710.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity