Lsi08G000730.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGAAAAATGGAGATTTTATTCAAAGGAGGTGAAGAAGGTGAGCTTTTTAGGAGCACCCATAATCACAGCCCTTGTTCTTCAGTACCTTTCTCAGGTCGTCACCGTCATCGTCGTCGGCCATCTTGGCGACGAGCTCTTGCTTTCCGGAGTCTCCATTGGCGTTTCCTTCATTCGGGTTACTGGCTTTAGTTTGCTCGTAATCTCTTCATTCCTTTTCTCTGCCCTTCTACTCTTCTCTTCACTCTCCTTTATTTTCTTTGCTTGTTTTCTTTCCCTCTAACCTTACGATTTAGTACTATTTTTAATGCAACCGTTTGATAACGTTTTCGTTTTCATTTCCTTCCTCATTACTTCCATATATTTCTCATTTTTTTAAAATATTTGATAATCACTTTTTTATTTTGGGTTTCAAATATAGTAAAATTAACCAAAGTATTTACAAATATAACAAAATGTCATTGTTTATTACTACCGGTAGTCCCTAGACATTTTGTTATATTTAAAAATGTTTCTAGCAATTTTTCCATTTAAAACAATTACCTTTAGATTTTAAGATAGGAAAATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACGCAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGTTGATAGAAGTCTATCAGAGTCTATCAATGATAGAAATGATTGAACTTTATCACTAATTGATGCTGATAGAAGTCTATCAATATCTATCAGTATTTTTTTTTTGCTATTTTTGGTAAATAGTTTGACATTTTTTCAACCGATAAAAATTTTCCTTTAAGATATGTTTCTTTTAGTTTTTTAGAATAATTCTAGGCTGCACAGATCATGCATCTTCGATCTTGAATCACAAAGGTAAAAAATATATATTTTTTTAGAACAAAAAATTTACTACGTGGCAACTTATGATTAGACACTTGGATAGACTGCACAAAGATAGGGACGGTCTATAATGCACCCAATTTTTTTTTTTTTTTTTTATAGAAAGAAAAACGATTATTGAGAAACTAGGTCGTTGATTTCCATTTTAGTATTCTCTTTTAAATTTTATGTATATTTTTTCTATCTCTCAATTATGGTTTTCAAATTATCTCATAGAAATGTTTAAATTTCTTGGTCAATCAAACTCTAAAAATGAAAAACAAGCTTTTAGATTAATTTTTTTTTTATCTTTTTAGTTTTGAAATTTAATTTGTTTGTTGAAAACACATGGTAAAAAATAGATAATAAAACATAAAAAGTGAAAATTGTGTTTATAAATTTAATTTTCAAAAACAAAAAAATAAAATAAAATAAAATAGTTATCAAATAATTGAGCCTAAGATTCTCTCCCTCCCCTCTGCCTTTTATCTTTTTTCCCATCTCTCACCTCTATCTCTTCCATCATAACTTTTTTTTTTCTTTTAATAATTAAAAGTATTTAATACTTCCTTATATTTTTCCTTTTCAAGTATTCTTTCCTTTTTTTTCTCTCTTTCATTTTTCTTTAATACTTTCTCTCTCATTTCTGTTCTCTCTCCTTTCATTTTCTTTCTTTTCAATAATGTGCCTTTAGTTATTGTTTTCTTTTAAAGTCTTTATTATATCCCCTAAATTTTTGTAGGATTTTTAATTTCTTATTATTAAATTAATTAATTAATTAATATAGATATTTCATGTTTGCAATTAATTTTCAAAGAAAAATTCTCTTTCTTTTTTAGATTTTATTTGTGTATACCACTGACTAATGAGACAATTTTAGGGGCAAGAAATAAAAATTATTATTGAATTAAATAAATGTAGTAGGTTGGATACCAACTTAAATGTTTCGTTACCAAGTTGACATACACAAATAACCTATCGTGCAATCAATTAATGATAGTTTGAAAAATCTAATTTATAAAGTTTGTGACAATTTGTAAACAAAAATTTAGACTACACCTATCTTTTGTGCATCACAGACAACATCTAATAAGTAGTTGCAATGTGTAAAAGAAATTCAAATTTTTTTTTTTTTTTTTTTTTTTACACATTAAGATAAGGGGAACATGGAAATAGGTGCAGTTTGCACTCAATCATTGCCAATTTAAAAATTAGGTTGCCAACCAAATTTAAACAATATTTGAAGGATAAATTTTAATATCAATTATTACTTTTCTTTTTAGTAAGGCATGAAATTGTATTAATATTATAACTCTTTATGATGATTTGTATATATTTTTTTTTAATTAATGTTATATATTTTAGGTTAAAATATTATTTTAGTTCTCATGCTATGAAGTTCGTTCAATTTTAGTCTCTATACTTTCAATTGTTCAATTTGAGTCCAAATTTTCAAAAATTGATTAAATAATAATAATAATAATAATAATAATTTCATAAAAAAAATAAAATATGTGAATATGTTTTCAAAATTTATAGTAAAAATGTTATAGATAACAAAAAGGTTTTTTAAAAAAATCAACAATAAATTAGCATTGATTAAATTTAAGATTCATTGAGAGTGCATGGACTAAAATTGGACAATTGAAAGTACAGAGACTAAAATTGAACAAACCTCAAAGTATAGAGACCAAAATGATATTTTAACCTAGGGACCAAAATGGTATTTTAATCTACATTTTATTATATTATATGTACTAAATTTATCACAATTAAATAAACTAAAGAATCAACCACATTTTTGTTTGTAATTCTTTTTTTTTTAGAAAAAAAAAAACTAATTGTTATCAAACTTTTTTTTTTTCTATTCTTAAACCACATAAAAGGAGAAAAAATGGAAAACAAGAAACCAACCATCCATTTAATAACGTTTCTATTTATTATTTCTTTGTTTCTTATTTTTTAAAAATTAGAAACGTTATTTAGTTTTCTTATTTTTTTTTTAAAGAAAAAAATAGAAACATAAACTTGTTTGATAATCATTTCTTATTTTTTGTATTTTTCTCTAGACTTTTTCTCTTATTTTATAGTTTAAATATAATTTAATTTTGTAAAATAAAAATATATAGCATGCATTGAAATATAAAAAATAATTATCAAATATTTACATTATCAAATACATATAAGTCCTGATGCAAAATTAATAACAATAATACAATTGTTTCTATCATTCATATGTTGCTAAAATTTGATTCACAATATTATATTTTACTCAAATTATTTGTCTTAAACAATGTTAACACAATTACATTATAATGCAAATGTCATGGTTGTAAAATATTTAAGTGAATGTCTTACTAAACAAAATTTATATATTGTAAAATTCTAATGATTTTGTTAGTGATATAAAATTAAATTTGTGTTTACCCACTAGCTTAAGCTTTTGGGTGGTTTAGGAGGTCCTATGTTCAAACCCCCTAGGATGCACCTGCTTACCAACTAACCAAACCTTAGTTTTGCTTCAAAGAAGAATCAAATTTAAATAAATAGAAACGAAACAGGAAGAAACTAGTTTATCAAATTTAGTCTCATTTTTAGAAACAAATAAGTAAATGAGTTTTAGAAACAAAAAACGAGAACAGTTATCAAACAAGTCAATTTCTGAAAAATGAGAAATAAAAACAAACAATGGGAAACAAAAACTTAAGGCCCAATTTGGTAACCATTTCATTTTCGATTTTTGGTGTTTGAAAATTAGGTTTATTTCCTCCCTATTTCTTATAATGATTTGCATCTTTCTTAACTACAATGGTTGAATTGTTAGCCAAATTTCAAAAACAAAAACAAGTTTTTAAAAACACTTGTTTTAGTTATCAAAATTTGGCTTAGCTTTTAAACCATAAGCAAAAAGTAGATAACAAATGAAGAAATTTGAAGGTGGACGTTAGCCTCTGTAGGCTTAATTTTTTAAAACAAAAAACCAAAAATCAAATGATTACCCAACCACGCTTAAGTTAATGGGTTTTGGTTGAGAATGATATATGTTTATCTATTAGTTATGAATAATTTTAATTGGGATGATATAATTACTATGTTATCATTAGCATTTACAATATTAAATTAATGTTGTTTTGTTGTTGTAGCTAGGAATGGCTGGAGCTTTAGAAACTCTATGTGGGCAAGCATATGGGGCAGAGCAATATCATAAACTTGGAGTTTATACTTATAGTTGCATAATTTCTCTCCTTTTGGTCTGTTTTCCTATCTCAATATTATGGTTCTTCTCAGACAAATTACTAATTTTGATTGGTCAAGACCCTTCGATTTCTTTAGTGGCAAGAAATTACTCAGTTTTTCTCATTCCAAATCTCTTTGCCTATGCAATTCTTCAATCTCTTATGCGCTATCTCCTCACTCAAAGCTTGATCCTTCCTTTGCTCTATTGCTCTTTTGCCACACTCTCTTTGCATATTCCCATTTGTTGGCTTCTTGTTCTTCATTTCAAGTTCAAGGTTATGGGAGCTGCTTTGGCTCTTGGCATATCTTATTGGTTCAATGCTATTTTACTTGCCCTCTATATCTTCTTCTCTCCTTCTTGTAACAAGACTCGGGCTCCATTCTCGAGCGACGCCATCTCGACTATACCCAAGTTCTTTCGCCTCGCCCTCCCTTCTGCCTTGATGGTTTGGTAAGTCATCGATTTGACTTGATTTGATCTGATCTGATCTTATCTGATCTGATTGTGCGTGTTTTGCAGCCTTGAATGGTGGTCTTACGAGGTTATTCTTTTGCTTTCTGGGCTTTTACCAAATCCTAAGGTGGAGGCTTCAGTGCTTTCTATATGGTATTATTTATATGCTTTTTAGTTATGTCAAGTTGTTGAGAACTCAAATTTTTTTTGAAAAGTTAGGCTTAAAGTCTTAACTCTTTCAATTTTTTTTTATGGTATTTGGGCAGTTTCTCAATCACTTATTTGCATTATTTCATTCCATATGGGTTGGGGGCAACAGTAAGGTGA ATGAGAGAAAAATGGAGATTTTATTCAAAGGAGGTGAAGAAGGTGAGCTTTTTAGGAGCACCCATAATCACAGCCCTTGTTCTTCAGTACCTTTCTCAGGTCGTCACCGTCATCGTCGTCGGCCATCTTGGCGACGAGCTCTTGCTTTCCGGAGTCTCCATTGGCGTTTCCTTCATTCGGGTTACTGGCTTTAGTTTGCTCCTAGGAATGGCTGGAGCTTTAGAAACTCTATGTGGGCAAGCATATGGGGCAGAGCAATATCATAAACTTGGAGTTTATACTTATAGTTGCATAATTTCTCTCCTTTTGGTCTGTTTTCCTATCTCAATATTATGGTTCTTCTCAGACAAATTACTAATTTTGATTGGTCAAGACCCTTCGATTTCTTTAGTGGCAAGAAATTACTCAGTTTTTCTCATTCCAAATCTCTTTGCCTATGCAATTCTTCAATCTCTTATGCGCTATCTCCTCACTCAAAGCTTGATCCTTCCTTTGCTCTATTGCTCTTTTGCCACACTCTCTTTGCATATTCCCATTTGTTGGCTTCTTGTTCTTCATTTCAAGTTCAAGGTTATGGGAGCTGCTTTGGCTCTTGGCATATCTTATTGGTTCAATGCTATTTTACTTGCCCTCTATATCTTCTTCTCTCCTTCTTGTAACAAGACTCGGGCTCCATTCTCGAGCGACGCCATCTCGACTATACCCAAGTTCTTTCGCCTCGCCCTCCCTTCTGCCTTGATGGTTTGCCTTGAATGGTGGTCTTACGAGGTTATTCTTTTGCTTTCTGGGCTTTTACCAAATCCTAAGGTGGAGGCTTCAGTGCTTTCTATATGTTTCTCAATCACTTATTTGCATTATTTCATTCCATATGGGTTGGGGGCAACAGTAAGGTGA ATGAGAGAAAAATGGAGATTTTATTCAAAGGAGGTGAAGAAGGTGAGCTTTTTAGGAGCACCCATAATCACAGCCCTTGTTCTTCAGTACCTTTCTCAGGTCGTCACCGTCATCGTCGTCGGCCATCTTGGCGACGAGCTCTTGCTTTCCGGAGTCTCCATTGGCGTTTCCTTCATTCGGGTTACTGGCTTTAGTTTGCTCCTAGGAATGGCTGGAGCTTTAGAAACTCTATGTGGGCAAGCATATGGGGCAGAGCAATATCATAAACTTGGAGTTTATACTTATAGTTGCATAATTTCTCTCCTTTTGGTCTGTTTTCCTATCTCAATATTATGGTTCTTCTCAGACAAATTACTAATTTTGATTGGTCAAGACCCTTCGATTTCTTTAGTGGCAAGAAATTACTCAGTTTTTCTCATTCCAAATCTCTTTGCCTATGCAATTCTTCAATCTCTTATGCGCTATCTCCTCACTCAAAGCTTGATCCTTCCTTTGCTCTATTGCTCTTTTGCCACACTCTCTTTGCATATTCCCATTTGTTGGCTTCTTGTTCTTCATTTCAAGTTCAAGGTTATGGGAGCTGCTTTGGCTCTTGGCATATCTTATTGGTTCAATGCTATTTTACTTGCCCTCTATATCTTCTTCTCTCCTTCTTGTAACAAGACTCGGGCTCCATTCTCGAGCGACGCCATCTCGACTATACCCAAGTTCTTTCGCCTCGCCCTCCCTTCTGCCTTGATGGTTTGCCTTGAATGGTGGTCTTACGAGGTTATTCTTTTGCTTTCTGGGCTTTTACCAAATCCTAAGGTGGAGGCTTCAGTGCTTTCTATATGTTTCTCAATCACTTATTTGCATTATTTCATTCCATATGGGTTGGGGGCAACAGTAAGGTGA MREKWRFYSKEVKKVSFLGAPIITALVLQYLSQVVTVIVVGHLGDELLLSGVSIGVSFIRVTGFSLLLGMAGALETLCGQAYGAEQYHKLGVYTYSCIISLLLVCFPISILWFFSDKLLILIGQDPSISLVARNYSVFLIPNLFAYAILQSLMRYLLTQSLILPLLYCSFATLSLHIPICWLLVLHFKFKVMGAALALGISYWFNAILLALYIFFSPSCNKTRAPFSSDAISTIPKFFRLALPSALMVCLEWWSYEVILLLSGLLPNPKVEASVLSICFSITYLHYFIPYGLGATVR Homology
BLAST of Lsi08G000730.1 vs. ExPASy Swiss-Prot
Match: Q9SIA4 (Protein DETOXIFICATION 3 OS=Arabidopsis thaliana OX=3702 GN=DTX3 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 2.0e-81 Identity = 157/286 (54.90%), Postives = 205/286 (71.68%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy Swiss-Prot
Match: Q8RWF5 (Protein DETOXIFICATION 6 OS=Arabidopsis thaliana OX=3702 GN=DTX6 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.2e-78 Identity = 156/291 (53.61%), Postives = 207/291 (71.13%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy Swiss-Prot
Match: Q8GXM8 (Protein DETOXIFICATION 2 OS=Arabidopsis thaliana OX=3702 GN=DTX2 PE=2 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.7e-78 Identity = 151/286 (52.80%), Postives = 208/286 (72.73%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy Swiss-Prot
Match: Q9SIA5 (Protein DETOXIFICATION 1 OS=Arabidopsis thaliana OX=3702 GN=DTX1 PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.5e-78 Identity = 152/286 (53.15%), Postives = 204/286 (71.33%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy Swiss-Prot
Match: Q9SIA1 (Protein DETOXIFICATION 5 OS=Arabidopsis thaliana OX=3702 GN=DTX5 PE=3 SV=2) HSP 1 Score: 292.7 bits (748), Expect = 4.6e-78 Identity = 153/290 (52.76%), Postives = 206/290 (71.03%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy TrEMBL
Match: A0A1S3CAP0 (protein DETOXIFICATION 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498682 PE=3 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 3.2e-135 Identity = 254/296 (85.81%), Postives = 272/296 (91.89%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy TrEMBL
Match: A0A6J1IA18 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111472575 PE=3 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 7.2e-135 Identity = 248/295 (84.07%), Postives = 269/295 (91.19%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy TrEMBL
Match: A0A6J1CL18 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134 Identity = 251/296 (84.80%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy TrEMBL
Match: A0A6J1CK03 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134 Identity = 251/296 (84.80%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. ExPASy TrEMBL
Match: A0A6J1CLS8 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134 Identity = 251/296 (84.80%), Postives = 270/296 (91.22%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. NCBI nr
Match: XP_038889426.1 (protein DETOXIFICATION 8-like isoform X2 [Benincasa hispida]) HSP 1 Score: 537.7 bits (1384), Expect = 6.2e-149 Identity = 276/296 (93.24%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. NCBI nr
Match: XP_031740846.1 (protein DETOXIFICATION 8 isoform X1 [Cucumis sativus] >XP_031740847.1 protein DETOXIFICATION 8 isoform X1 [Cucumis sativus] >KAE8648998.1 hypothetical protein Csa_008514 [Cucumis sativus]) HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142 Identity = 266/296 (89.86%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. NCBI nr
Match: XP_038889425.1 (protein DETOXIFICATION 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 507.3 bits (1305), Expect = 9.0e-140 Identity = 259/296 (87.50%), Postives = 279/296 (94.26%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. NCBI nr
Match: XP_008459601.1 (PREDICTED: protein DETOXIFICATION 3-like isoform X2 [Cucumis melo]) HSP 1 Score: 491.1 bits (1263), Expect = 6.7e-135 Identity = 254/296 (85.81%), Postives = 272/296 (91.89%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. NCBI nr
Match: XP_022973951.1 (protein DETOXIFICATION 8-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134 Identity = 248/295 (84.07%), Postives = 269/295 (91.19%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. TAIR 10
Match: AT2G04050.1 (MATE efflux family protein ) HSP 1 Score: 303.9 bits (777), Expect = 1.4e-82 Identity = 157/286 (54.90%), Postives = 205/286 (71.68%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. TAIR 10
Match: AT2G04100.1 (MATE efflux family protein ) HSP 1 Score: 294.7 bits (753), Expect = 8.5e-80 Identity = 156/291 (53.61%), Postives = 207/291 (71.13%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. TAIR 10
Match: AT2G04080.1 (MATE efflux family protein ) HSP 1 Score: 293.5 bits (750), Expect = 1.9e-79 Identity = 151/286 (52.80%), Postives = 208/286 (72.73%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. TAIR 10
Match: AT2G04040.1 (MATE efflux family protein ) HSP 1 Score: 293.1 bits (749), Expect = 2.5e-79 Identity = 152/286 (53.15%), Postives = 204/286 (71.33%), Query Frame = 0
BLAST of Lsi08G000730.1 vs. TAIR 10
Match: AT2G04090.1 (MATE efflux family protein ) HSP 1 Score: 292.7 bits (748), Expect = 3.2e-79 Identity = 153/290 (52.76%), Postives = 206/290 (71.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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