Lsi06G012030.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G012030.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 22406987 .. 22410662 (-)
Sequence length390
RNA-Seq ExpressionLsi06G012030.1
SyntenyLsi06G012030.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTGTGAGCCATTTACCATCTTCTGCTGGCTTTTTGTCTCTTTTTCTCTTGGAGAACTTCTGTCAAGAGAGAAGTGGGTAAATGGAAATTGTTTTTTGTCAGTGAGTAGAGAAATGAAATTGGAATAGTTCAAGATCTTTTGCAGTTCTGTATTTGTGTTTGTCGCTGAAGTTTGATTGAACACTGATAGCTAGTCAAGTACTTTAGCGATATAGTTTATTTCAAATCTGCTCCTACCTAGGAAGGAAGTATGGTTTCGTGGGATGTGGGGTATATTTTTGACAGCAGAAATATGGGAACTAGAGAAGCCTAGATTGACTCTCTTTTCCGTTTGAATACTGCAGGAGAGTTTGGGGTGAATTAGGTGGAGAGATTAGTGTCAAGTATGAGAGGTAGAAAGAAATGAGAACGAAGGGGATTGAAAATTATTGAACTGTGGCTGTCTGATGTTCCACATGAATTTGTAACATTCTAAAAAAAACTATCAGAAGAGAAAATCACAGAAAAATATTCATTATTTAGTTGTGTAACATTATTAAGAGTGGGGAAATGTCTACTACAGTACTCATTCCTTGAATATCCAACTACATAATTAATCAATATTATATTTAGTTTGTGTGGGCTTCTCCATCCCATTTGAGGGTACCTATACCATAGATATTCCCTTACCGGCGTAAACTAAGTTTGAAAGAAAATTAATTTAGTGAAGATAATTTGATGCTATAAACTTTAAAACATTAGTGAAGTGAAAGAAGATAAAATGGTCGGAGTGAAAACTTGGGGAATTTGGGTCCATTTCTTTTTCGTAACAAAAGTTTGTGTCCTGTGATTGCATTGCCATTTATTGATCTTCTATCTATTAAGTGTCTTTTTCTTTTTCTAGATATCTTATGATGTTTATACCTTTCATTCTTTTAACACATCTATAAAATGTGTTAGTAAGGTATCTTCGAGTATTAGTTTCTTTTCATTTATTCAACTTGTCTCTTGTTCAAAAGCATGTATATGTTAAATAAATTGCGATATTGAAGAAAAGAGCTTATTCATTGATTTCAATTTGTGATCACATTTGATTTATGTGCTTTCCCTTCTTTTCCAATTATTATCGCATATGTTATATGAACTAACGTTGCATGGTAAAAATTAATGTAAATAAATAGTATAGATACAGAATGACAGACCAAAGGAATAACCAGAAAAGAAAGGAGACTTCTGTTTAACTTATGATATGGATATTATTATTATGTTTTGCAAATTTCTGACCATTATCCTCTTTCAAAGTAGAGCAGGTTGAGGACCTCTTAGATTTTTGTCAACAAATTATTCATTATATCAAACTTTGCTAATATAGCAAGTATTGAAGGTGTTGTACATATTTTTTTCTTTTCCATTTCTCTTACAGAAATCTTTTGAGGGAAAATTCCCACCAACTGTTGAACATTCTTGAGATTGATTATGTGATTATAAACTAAGAAAATGTTGTTTGAAGGATTTATATTTTATTTGAGTGTATTTATTGATGGTGTGAATTATATATCTCCAATTAATAACTGCAAATTTCAAATTTTCTTTTATAATCAAAACTAAATGAAAACAAAAAGAAGATAGAACTGACTACTGAAAAATAAAATATGAAAATATGGAGTATATATCTAGTCATGAATGCACTTCTGATTTCTGACAACTGAATGTTAAAAGAGAGAATAATATTGTTCCATTACAAATAGGATCGATCTGGATGGACTTTTTAAGTGCAAACAGACCTTATAATGTCCTCTTTCAAGTCTTGAGTATCATTTTCAAACTCTAAACTTGTATAATAGGAGCCACAAAAGGAAAAGGAAAAATCTGCTCAAACTTACAAAAATATACAATATTTGTCTGATACTAATCAAACTAACTCTTTGCTTAATAATAATAAATTAAAAACTATATACCAACAAAGGGAAGCTGTTAGTAGAATGTATATACTCAGAGCCTATTTGGAATGAATTTTCAATTGTTTGAACACTTGGAAATTCATTCCAAATAGGCTCTTATTCAATAGATATAGATTATATCTGAAAGTATAGTTTTCTTATTCATCATTGATCTATATTCTTCTAATGTTTCGAGTAAAAAAGACCTGCCATCAAGAATTCAGCCGCAGATGATTACGTTGAAATAGAGTAGGAACTAAGTCTGATTGAAGAAATGTTAAAGTGAATATTTCCTTCATGTGCACTGTGGGAACCTGTAACATCTGATTGAAAGTTTAAAAACAAAAATCAGGTATTTAAGATATATCATAAGATCCCACTTTTGATTATGGGGTAGAAGAATCAAAGTCACTGCACAGATCAAACCTTTTCCTTTAACACTGCCACAGGAACATATACAATAGACTGTTCAAACATGTGTGACCTATCTAAAATCCCATCATCTTTCTTATTTGATACCCTAAGTAATTTCTGCTTCATTGTCTCTAATCTACCCTTAATGTTACACAATCTCTCCATCTCCACTTCTGCTTCTTGACCTCCACCTCTAGCTACAAAGTTTACCCTCTTCTTTACCTTTGTTTTCCTATTCTTTAGGAGATTCTTCAAGCTTATATCATCACCAAAATCAAAAGCATCCTGGATAAAGCAAATAAACATACCAAGTTAAGCAGAGTTCAGGTTTGAAGTTTATAACAGCTAAATATAATGAGTCAGTTTCTAGCTGGCATTAACATAATAGGAAAAGCTTGAGATGAACAGTCAACATGTCTAAGCTCTACATAAGCCAATATTATTTTCGTATACTCACTATATTGAATGAACCTAAATCATATAAAGTGAGATTTATCAGATTATTTTATCATATCATACCACGTGCTTCATATATCAGCTTTATGTTCATTTTGAGAATTCCAAGCCAAGAGTGATTTTTTAAACATGCACAAAAGAAATAACAGAATAGTATACTGGGTATGAAGAAGATGATTACAAGACGACAATCAAATCTGGGATTCTTGCTTTCAATGCAGTTAACAAAAAACATGAAAACTTGGTTACAGAAAGGTTGATTGAAACATGTGTCTACTATTCCCAAGTCCAAACAGTTGCAAACTGCTTTCTTAAACCGGAACAATATTTTGATGTATCAAATTTAATTAAAAACCACAACAGCTCTATCATATGAGAATGCCTTTAAAATGAGAGCTAAGTAGTAAAGCAAAGGGAAACCATTACCTTCCAAACCGATTTTCAAACAAGAATCAGCCTTATATTTTAAGCGTTTTCCAACACATTTTCTTTCTTAAAAAAACTTTTAACACAACTTGAATTGGAAATTCCCTCAATGCCATTCTGTCTTTGATTATATTTTTTCAAGCATTAGACAAAACTATATTTTTTATTATTTTTTTGTTATGGGCAAACGATACCTTGTTATGGTTGGAAGATACAAGTGATGGTTTTCTGTGCTGCTTTTTCTTGCAATGACTTCCGTGCAATTTCAGCTGCAGTTCTTTCATTGGTGCATCCTCTAATGAAAGAAGATTCGCAGACATTTCCTTTGAATCTGCTAATCTGGACTCACTGGAAGTCTTATGAGAACTATGGGGTTGTGTTGCTCCCTCCACCTGTTTATGTAAAGAAGAATGTGAGGATCAGAGTCGGAGTCTTTATGCAGGCACAAGGCTGGTAA

mRNA sequence

ATGATAAATCTTTTGAGGGAAAATTCCCACCAACTGTTGAACATTCTTGAGATTGATTATGAGATTCTTCAAGCTTATATCATCACCAAAATCAAAAGCATCCTGGATAAAGCAAATAAACATACCAAGTTAAGCAGAGTTCAGATACAAGTGATGGTTTTCTGTGCTGCTTTTTCTTGCAATGACTTCCGTGCAATTTCAGCTGCAGTTCTTTCATTGGTGCATCCTCTAATGAAAGAAGATTCGCAGACATTTCCTTTGAATCTGCTAATCTGGACTCACTGGAAGTCTTATGAGAACTATGGGGTTGTGTTGCTCCCTCCACCTGTTTATGTAAAGAAGAATGTGAGGATCAGAGTCGGAGTCTTTATGCAGGCACAAGGCTGGTAA

Coding sequence (CDS)

ATGATAAATCTTTTGAGGGAAAATTCCCACCAACTGTTGAACATTCTTGAGATTGATTATGAGATTCTTCAAGCTTATATCATCACCAAAATCAAAAGCATCCTGGATAAAGCAAATAAACATACCAAGTTAAGCAGAGTTCAGATACAAGTGATGGTTTTCTGTGCTGCTTTTTCTTGCAATGACTTCCGTGCAATTTCAGCTGCAGTTCTTTCATTGGTGCATCCTCTAATGAAAGAAGATTCGCAGACATTTCCTTTGAATCTGCTAATCTGGACTCACTGGAAGTCTTATGAGAACTATGGGGTTGTGTTGCTCCCTCCACCTGTTTATGTAAAGAAGAATGTGAGGATCAGAGTCGGAGTCTTTATGCAGGCACAAGGCTGGTAA

Protein sequence

MINLLRENSHQLLNILEIDYEILQAYIITKIKSILDKANKHTKLSRVQIQVMVFCAAFSCNDFRAISAAVLSLVHPLMKEDSQTFPLNLLIWTHWKSYENYGVVLLPPPVYVKKNVRIRVGVFMQAQGW
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi06G012030Lsi06G012030gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G012030.1.exon.4Lsi06G012030.1.exon.4exon
Lsi06G012030.1.exon.3Lsi06G012030.1.exon.3exon
Lsi06G012030.1.exon.2Lsi06G012030.1.exon.2exon
Lsi06G012030.1.exon.1Lsi06G012030.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G012030.1.CDS.4Lsi06G012030.1.CDS.4CDS
Lsi06G012030.1.CDS.3Lsi06G012030.1.CDS.3CDS
Lsi06G012030.1.CDS.2Lsi06G012030.1.CDS.2CDS
Lsi06G012030.1.CDS.1Lsi06G012030.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi06G012030.1Lsi06G012030.1-proteinpolypeptide