Lsi06G005090.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G005090.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 6121759 .. 6122814 (+)
Sequence length965
RNA-Seq ExpressionLsi06G005090.1
SyntenyLsi06G005090.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCTTGTAATGTGCCAGTTCTTCCTGTAATAATTTGCTTTTGTCAAAAGAAATTCTTCTAAATGATGTTTCAATACTAATATAATTCTCTGTCCAGGGATTGACTGCAAGAATGCAGCTCACCGACGTCCATGCTTGACGGGGTTCTTTTCCCTGATCAGCTGGGAACCGTTGTCCTCTTTGTTCTTATCTAACATTGTCAAGACTGTAGGTAATATGGAACTTGCTGCAATAGACATTTTTATTGAGAAAGAGACTCAAGGTTTATTTAAGTTCATTGTTATATTTGATGAGAATAATGACTGTCAAGGTGTATGCAATTCTCCAAGGTACCTGAAGCGACTCAACGGTCGGGGCTGATTTCAACTCCATTTGCACCTGGTAACTTCTGTCATCTCCTATACTTTGTAAACTGTCAATCTAGTCATGTTAATAGTGAGGCCAAGCTATGAAGTTGTATCAGCTGGGCAATTTCCATCTCGTTCGGGTGTGTTATCGGTAGATCATATATTTCGTAGCGTAAGCTCGTTTCTTGGTACATCTCTCCTGTCCTCTTAGAAAAGTAAGGAAGAAATCTAGCCAAATTTATCTTCCCATGAGTTGATTTACTTTTGGGAAATATTGAAACCATAGAGTTTAGCTTCCTCAAGTGAGTGAGAGTTTCCAAATCCTTCACAGGGCCTTATAGTTCTAAATCAAGAGACATACTACAGCATTTGCTTCTCCATATACCTTTGAAGATCACTTGGTTGTGGGTGGAAGCTTTGAATCTTCGTCGCATTTCTAATCTTCACCTCGCATTTGTAATGTAATATTTTTTAATTAAAAAAAAAATCATAACAATAAATTGTACTCCGTCGGGTTCGAAATTTTTGCAGGTTTGATACGACTCAAAAGAAAATTGAGTGAGTAGCATTATATCAGTTTGACTCAAAGTAGTATCTGACTGAGTTGAATGTAACAATCCTGTATTGTGGTCTATTGGTTGATATGGGATGATACAGATTTTCTTCGATTAAGGGGTTGATAATGGTATCTTGATTTTAAGTTGC

mRNA sequence

ATGCCTCCTTGGATTGACTGCAAGAATGCAGCTCACCGACGTCCATGCTTGACGGGGTTCTTTTCCCTGATCAGCTGGGAACCGTTGTCCTCTTTGTTCTTATCTAACATTGTCAAGACTGTAGGTAATATGGAACTTGCTGCAATAGACATTTTTATTGAGAAAGAGACTCAAGGTTTATTTAAGTTCATTGTTATATTTGATGAGAATAATGACTGTCAAGGTGTATGCAATTCTCCAAGGTACCTGAAGCGACTCAACGGTCGGGGCTGATTTCAACTCCATTTGCACCTGGTAACTTCTGTCATCTCCTATACTTTGTAAACTGTCAATCTAGTCATGTTAATAGTGAGGCCAAGCTATGAAGTTGTATCAGCTGGGCAATTTCCATCTCGTTCGGGTGTGTTATCGGTAGATCATATATTTCGTAGCGTAAGCTCGTTTCTTGGTACATCTCTCCTGTCCTCTTAGAAAAGTAAGGAAGAAATCTAGCCAAATTTATCTTCCCATGAGTTGATTTACTTTTGGGAAATATTGAAACCATAGAGTTTAGCTTCCTCAAGTGAGTGAGAGTTTCCAAATCCTTCACAGGGCCTTATAGTTCTAAATCAAGAGACATACTACAGCATTTGCTTCTCCATATACCTTTGAAGATCACTTGGTTGTGGGTGGAAGCTTTGAATCTTCGTCGCATTTCTAATCTTCACCTCGCATTTGTAATGTAATATTTTTTAATTAAAAAAAAAATCATAACAATAAATTGTACTCCGTCGGGTTCGAAATTTTTGCAGGTTTGATACGACTCAAAAGAAAATTGAGTGAGTAGCATTATATCAGTTTGACTCAAAGTAGTATCTGACTGAGTTGAATGTAACAATCCTGTATTGTGGTCTATTGGTTGATATGGGATGATACAGATTTTCTTCGATTAAGGGGTTGATAATGGTATCTTGATTTTAAGTTGC

Coding sequence (CDS)

ATGCCTCCTTGGATTGACTGCAAGAATGCAGCTCACCGACGTCCATGCTTGACGGGGTTCTTTTCCCTGATCAGCTGGGAACCGTTGTCCTCTTTGTTCTTATCTAACATTGTCAAGACTGTAGGTAATATGGAACTTGCTGCAATAGACATTTTTATTGAGAAAGAGACTCAAGGTTTATTTAAGTTCATTGTTATATTTGATGAGAATAATGACTGTCAAGGTGTATGCAATTCTCCAAGGTACCTGAAGCGACTCAACGGTCGGGGCTGA

Protein sequence

MPPWIDCKNAAHRRPCLTGFFSLISWEPLSSLFLSNIVKTVGNMELAAIDIFIEKETQGLFKFIVIFDENNDCQGVCNSPRYLKRLNGRG
Homology
The following BLAST results are available for this feature:
BLAST of Lsi06G005090.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi06G005090.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi06G005090.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi06G005090.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi06G005090Lsi06G005090gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G005090.1.exon.2Lsi06G005090.1.exon.2exon
Lsi06G005090.1.exon.1Lsi06G005090.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G005090.1.CDS.1Lsi06G005090.1.CDS.1CDS
Lsi06G005090.1.CDS.2Lsi06G005090.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G005090.1.three_prime_UTR.1Lsi06G005090.1.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi06G005090.1Lsi06G005090.1-proteinpolypeptide