Lsi05G012660.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G012660.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Dehydration-responsive element-binding protein like
Location	chr05: 20431416 .. 20432051 (+)
Sequence length	636
RNA-Seq Expression	Lsi05G012660.1
Synteny	Lsi05G012660.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTTTTCAACTTTTTATGAAGAGTACTTCTCCAGTTCCGAGAGTAGTAATTGCCGCCGCCCCATTTTTTCCGATGAGGAGATTATGTTGGCGGCGAGCAATCCCAAGAAGAGAGCCGGCAGGAAGAAGTTTAAGGAGACAAGACATCCGGTTTACAGAGGGGTTAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAATCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCCGCCATCGCGCTTAGAGGTCTCACTGCTTGTCTCAATTTCGCGGATTCTGCGTGGCGGCTGCCTGTGCCGGCGTCTACCGACGCCAGAGATATCCAGAAGGCAGCGGCGGAGGCGGCGGAGGCATTCCGGCCGTCTGAGTCAGATGGGTCTTCGGTTGATGACTCAAGGACGGAAAATGGGATGACGGCGGAAACGAAGCCGGAAAATGTGTTTTACATGGATGAGGAAGCAGTTTTTGGGATGCCAGGATTGTTGGAAGATATGGCTGCGGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGATGTGTCATTATGGAGCTATTAA

mRNA sequence

ATGGATTCTTTTTCAACTTTTTATGAAGAGTACTTCTCCAGTTCCGAGAGTAGTAATTGCCGCCGCCCCATTTTTTCCGATGAGGAGATTATGTTGGCGGCGAGCAATCCCAAGAAGAGAGCCGGCAGGAAGAAGTTTAAGGAGACAAGACATCCGGTTTACAGAGGGGTTAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAATCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCCGCCATCGCGCTTAGAGGTCTCACTGCTTGTCTCAATTTCGCGGATTCTGCGTGGCGGCTGCCTGTGCCGGCGTCTACCGACGCCAGAGATATCCAGAAGGCAGCGGCGGAGGCGGCGGAGGCATTCCGGCCGTCTGAGTCAGATGGGTCTTCGGTTGATGACTCAAGGACGGAAAATGGGATGACGGCGGAAACGAAGCCGGAAAATGTGTTTTACATGGATGAGGAAGCAGTTTTTGGGATGCCAGGATTGTTGGAAGATATGGCTGCGGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGATGTGTCATTATGGAGCTATTAA

Coding sequence (CDS)

ATGGATTCTTTTTCAACTTTTTATGAAGAGTACTTCTCCAGTTCCGAGAGTAGTAATTGCCGCCGCCCCATTTTTTCCGATGAGGAGATTATGTTGGCGGCGAGCAATCCCAAGAAGAGAGCCGGCAGGAAGAAGTTTAAGGAGACAAGACATCCGGTTTACAGAGGGGTTAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAATCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCCGCCATCGCGCTTAGAGGTCTCACTGCTTGTCTCAATTTCGCGGATTCTGCGTGGCGGCTGCCTGTGCCGGCGTCTACCGACGCCAGAGATATCCAGAAGGCAGCGGCGGAGGCGGCGGAGGCATTCCGGCCGTCTGAGTCAGATGGGTCTTCGGTTGATGACTCAAGGACGGAAAATGGGATGACGGCGGAAACGAAGCCGGAAAATGTGTTTTACATGGATGAGGAAGCAGTTTTTGGGATGCCAGGATTGTTGGAAGATATGGCTGCGGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGATGTGTCATTATGGAGCTATTAA

Protein sequence

MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPASTDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY

Homology

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BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59
Identity = 128/221 (57.92%), Postives = 158/221 (71.49%), Query Frame = 0


Query: 4   FSTFYEEYFSSSESSNCRRPIFSDEEI--MLAASNPKKRAGRKKFKETRHPVYRGVRRRN 63
           +STF + + S S+    R P+    E    LA+S PKKRAGRKKF+ETRHP+YRGVR+RN
Sbjct: 5   YSTFPDSFLSISDH---RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRN 64

Query: 64  SGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPAS 123
           SGKWVCEVREPNKKSRIWLGTFPT EMAARAHDVAA+ALRG +ACLNFADSAWRL +P +
Sbjct: 65  SGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPET 124

Query: 124 TDARDIQKAAAEAAEAFR-PSESDGS--------SVDDSRTENGMTAETKPENVFYMDEE 183
           T  ++IQKAA+EAA AF+  + ++GS        +  +   E    AE +   VFYMD+E
Sbjct: 125 TCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDE 184

Query: 184 AVFGMPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 212
           A+ GMP   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 185 ALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

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BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 7.5e-59
Identity = 137/222 (61.71%), Postives = 157/222 (70.72%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS F E + S  ESS        D    LA+S PKK AGRKKF+ETRHP+YRGVRRR
Sbjct: 1   MNSFSAFSEMFGSDYESSVSSG---GDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKK+RIWLGTF TAEMAARAHDVAA+ALRG +ACLNFADSAWRL +P 
Sbjct: 61  NSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 STDARDIQKAAAEAAEAFRPSESD-----GSSVDDSRTENGMTAETKPENVFYMDEEAVF 180
           ST A+DIQKAAAEAA AF+    D     G  ++++  E   TAE + EN FYM +EA+F
Sbjct: 121 STCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAE-QSENAFYMHDEAMF 180

Query: 181 GMPGLLEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 212
            MP LL +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 181 EMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

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BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 7.5e-59
Identity = 133/220 (60.45%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS F E + S  E      P   D    LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYE------PQGGDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWV EVREPNKK+RIWLGTF TAEMAARAHDVAA+ALRG +ACLNFADSAWRL +P 
Sbjct: 61  NSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 STDARDIQKAAAEAAEAFRPSESD------GSSVDDSRTENGMTAETKPENVFYMDEEAV 180
           ST A+DIQKAAAEAA AF+    D      G  ++++  E   T E + E  FYMDEE +
Sbjct: 121 STCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPE-QSEGAFYMDEETM 180

Query: 181 FGMPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           FGMP LL++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 181 FGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

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BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.9e-58
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFS--DEEIMLAASNPKKRAGRKKFKETRHPVYRGVR 60
           M+SFS F E + S  ES     P+ S  D    LA S PKK AGRKKF+ETRHP+YRGVR
Sbjct: 1   MNSFSAFSEMFGSDYES-----PVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVR 60

Query: 61  RRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPV 120
           +RNSGKWVCE+REPNKK+RIWLGTF TAEMAARAHDVAAIALRG +ACLNFADSAWRL +
Sbjct: 61  QRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRI 120

Query: 121 PASTDARDIQKAAAEAAEAFR------PSESDGSSVDDSRTENGMTAETKPENVFYMDEE 180
           P ST A++IQKAAAEAA  F+       +++ G  ++++  E   T E + ++ FYMDEE
Sbjct: 121 PESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPE-QSQDAFYMDEE 180

Query: 181 AVFGMPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           A+ GM  LL++MA GM+LP P    ++  D++   DVSLWSY
Sbjct: 181 AMLGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

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BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot
Match: Q9SGJ6 (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=3702 GN=DREB1E PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-45
Identity = 101/186 (54.30%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 27  DEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTA 86
           +++I +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 87  EMAARAHDVAAIALRGLTACLNFADSAWRLPVPASTDARDIQKAAAEAAEAFRPSE-SDG 146
           +MAARAHDVA +ALRG +ACLNF+DSAWRLPVPASTD   I++ AAEAAE FRP E S G
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 147 SSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSD 206
            +V  S +E   + E     +  + EE +   P    DM   +       + D+   Y D
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSV-------YVDEEMCYED 181

Query: 207 VSLWSY 212
           +SLWSY
Sbjct: 183 LSLWSY 181

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BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL
Match: A0A140DCV6 (CRT/DRE-binding factor 1 OS=Cucumis melo OX=3656 GN=LOC103484041 PE=2 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFS FYEEYFSSSESSNCRRPIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMPG 180
           STDARDIQKAAAEAAEAFRP+ESDGSSVDDSRTENGM AE T PENVFYMDEEAVFGMPG
Sbjct: 121 STDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

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BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL
Match: A0A5A7SWS3 (Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00440 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFS FYEEYFSSSESSNCRRPIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMPG 180
           STDARDIQKAAAEAAEAFRP+ESDGSSVDDSRTENGM AE T PENVFYMDEEAVFGMPG
Sbjct: 121 STDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

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BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL
Match: A0A5D3DFF6 (Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00300 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 204/212 (96.23%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFS FYEEYFSSSESSNCRRPIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMPG 180
           S DARDIQKAAAEAAEAFRP+ESDGSSVDDSRTENGM AE T PENVFYMDEEAVFGMPG
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

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BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL
Match: A0A0A0L9N0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180260 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MDSFSTF-YEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRR 60
           MDSFSTF YE+YFSSSESSNCR PIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRR
Sbjct: 1   MDSFSTFNYEDYFSSSESSNCRLPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRR 60

Query: 61  RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVP 120
           RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRG TACLNFADSAWRLPVP
Sbjct: 61  RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGFTACLNFADSAWRLPVP 120

Query: 121 ASTDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMP 180
           AS DARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGM  E T PEN+FYMDEEAVFGMP
Sbjct: 121 ASADARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMMMETTTPENLFYMDEEAVFGMP 180

Query: 181 GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 213

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BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL
Match: A0A6J1EAB5 (dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111430798 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103
Identity = 189/211 (89.57%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFSTFYE+YFSSSESS CRR IFS++E+MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGL 180
           S DARDIQKAAAEAAEAFRP+ESDGSSVDDSRTEN MTAET PENV Y+D++A+FG+PGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

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BLAST of Lsi05G012660.1 vs. NCBI nr
Match: NP_001315370.1 (dehydration-responsive element-binding protein 1A [Cucumis melo] >AMK37721.1 CRT/DRE-binding factor 1 [Cucumis melo] >KAA0033609.1 dehydration-responsive element-binding protein 1A [Cucumis melo var. makuwa])

HSP 1 Score: 407.1 bits (1045), Expect = 9.0e-110
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFS FYEEYFSSSESSNCRRPIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMPG 180
           STDARDIQKAAAEAAEAFRP+ESDGSSVDDSRTENGM AE T PENVFYMDEEAVFGMPG
Sbjct: 121 STDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]

BLAST of Lsi05G012660.1 vs. NCBI nr
Match: TYK22275.1 (dehydration-responsive element-binding protein 1A [Cucumis melo var. makuwa])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 204/212 (96.23%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFS FYEEYFSSSESSNCRRPIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMPG 180
           S DARDIQKAAAEAAEAFRP+ESDGSSVDDSRTENGM AE T PENVFYMDEEAVFGMPG
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]

BLAST of Lsi05G012660.1 vs. NCBI nr
Match: XP_038900545.1 (dehydration-responsive element-binding protein 1A-like [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 8.4e-108
Identity = 200/211 (94.79%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MDSFSTFYE+YFSSSESSNCRRP + DEEIMLA SNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSTFYEDYFSSSESSNCRRPFYLDEEIMLAESNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ALRGLTACLNFADSAWRLPVPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGLTACLNFADSAWRLPVPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGL 180
           S DARDIQKAAAEAAEAFRP ESD SSVDDSRTEN MTAET PENVFYMDEEAVFGMPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPVESDRSSVDDSRTENWMTAETTPENVFYMDEEAVFGMPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of Lsi05G012660.1 vs. NCBI nr
Match: XP_004140794.1 (dehydration-responsive element-binding protein 1A [Cucumis sativus] >KGN57337.1 hypothetical protein Csa_010523 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 3.5e-106
Identity = 201/213 (94.37%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MDSFSTF-YEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRR 60
           MDSFSTF YE+YFSSSESSNCR PIFSDE+ MLAASNPKKRAGRKKFKETRHPVYRGVRR
Sbjct: 1   MDSFSTFNYEDYFSSSESSNCRLPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRR 60

Query: 61  RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVP 120
           RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRG TACLNFADSAWRLPVP
Sbjct: 61  RNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGFTACLNFADSAWRLPVP 120

Query: 121 ASTDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAE-TKPENVFYMDEEAVFGMP 180
           AS DARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGM  E T PEN+FYMDEEAVFGMP
Sbjct: 121 ASADARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMMMETTTPENLFYMDEEAVFGMP 180

Query: 181 GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 GLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 213

[Close]

BLAST of Lsi05G012660.1 vs. NCBI nr
Match: XP_023522016.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pepo] >XP_023553052.1 dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-103
Identity = 190/211 (90.05%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFSTFYE+YFSSSESS CRR IFSD+E+MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRSIFSDKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 STDARDIQKAAAEAAEAFRPSESDGSSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGL 180
           S DARDIQKAAAEAAEAFRP+ESDGSSVDDSRTEN MTAET PENV Y+D++A+FG+PGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of Lsi05G012660.1 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-60
Identity = 128/221 (57.92%), Postives = 158/221 (71.49%), Query Frame = 0


Query: 4   FSTFYEEYFSSSESSNCRRPIFSDEEI--MLAASNPKKRAGRKKFKETRHPVYRGVRRRN 63
           +STF + + S S+    R P+    E    LA+S PKKRAGRKKF+ETRHP+YRGVR+RN
Sbjct: 5   YSTFPDSFLSISDH---RSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRN 64

Query: 64  SGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPAS 123
           SGKWVCEVREPNKKSRIWLGTFPT EMAARAHDVAA+ALRG +ACLNFADSAWRL +P +
Sbjct: 65  SGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPET 124

Query: 124 TDARDIQKAAAEAAEAFR-PSESDGS--------SVDDSRTENGMTAETKPENVFYMDEE 183
           T  ++IQKAA+EAA AF+  + ++GS        +  +   E    AE +   VFYMD+E
Sbjct: 125 TCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDE 184

Query: 184 AVFGMPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 212
           A+ GMP   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 185 ALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]

BLAST of Lsi05G012660.1 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-60
Identity = 137/222 (61.71%), Postives = 157/222 (70.72%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS F E + S  ESS        D    LA+S PKK AGRKKF+ETRHP+YRGVRRR
Sbjct: 1   MNSFSAFSEMFGSDYESSVSSG---GDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWVCEVREPNKK+RIWLGTF TAEMAARAHDVAA+ALRG +ACLNFADSAWRL +P 
Sbjct: 61  NSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 STDARDIQKAAAEAAEAFRPSESD-----GSSVDDSRTENGMTAETKPENVFYMDEEAVF 180
           ST A+DIQKAAAEAA AF+    D     G  ++++  E   TAE + EN FYM +EA+F
Sbjct: 121 STCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAE-QSENAFYMHDEAMF 180

Query: 181 GMPGLLEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 212
            MP LL +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 181 EMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

[Close]

BLAST of Lsi05G012660.1 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-60
Identity = 133/220 (60.45%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFSDEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS F E + S  E      P   D    LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYE------PQGGDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120
           NSGKWV EVREPNKK+RIWLGTF TAEMAARAHDVAA+ALRG +ACLNFADSAWRL +P 
Sbjct: 61  NSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 STDARDIQKAAAEAAEAFRPSESD------GSSVDDSRTENGMTAETKPENVFYMDEEAV 180
           ST A+DIQKAAAEAA AF+    D      G  ++++  E   T E + E  FYMDEE +
Sbjct: 121 STCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPE-QSEGAFYMDEETM 180

Query: 181 FGMPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           FGMP LL++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 181 FGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of Lsi05G012660.1 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 225.7 bits (574), Expect = 3.5e-59
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 1   MDSFSTFYEEYFSSSESSNCRRPIFS--DEEIMLAASNPKKRAGRKKFKETRHPVYRGVR 60
           M+SFS F E + S  ES     P+ S  D    LA S PKK AGRKKF+ETRHP+YRGVR
Sbjct: 1   MNSFSAFSEMFGSDYES-----PVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVR 60

Query: 61  RRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPV 120
           +RNSGKWVCE+REPNKK+RIWLGTF TAEMAARAHDVAAIALRG +ACLNFADSAWRL +
Sbjct: 61  QRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRI 120

Query: 121 PASTDARDIQKAAAEAAEAFR------PSESDGSSVDDSRTENGMTAETKPENVFYMDEE 180
           P ST A++IQKAAAEAA  F+       +++ G  ++++  E   T E + ++ FYMDEE
Sbjct: 121 PESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPE-QSQDAFYMDEE 180

Query: 181 AVFGMPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           A+ GM  LL++MA GM+LP P    ++  D++   DVSLWSY
Sbjct: 181 AMLGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

[Close]

BLAST of Lsi05G012660.1 vs. TAIR 10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-46
Identity = 101/186 (54.30%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 27  DEEIMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTA 86
           +++I +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 87  EMAARAHDVAAIALRGLTACLNFADSAWRLPVPASTDARDIQKAAAEAAEAFRPSE-SDG 146
           +MAARAHDVA +ALRG +ACLNF+DSAWRLPVPASTD   I++ AAEAAE FRP E S G
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTG 122

Query: 147 SSVDDSRTENGMTAETKPENVFYMDEEAVFGMPGLLEDMAAGMMLPPPQHFRDDMDFYSD 206
            +V  S +E   + E     +  + EE +   P    DM   +       + D+   Y D
Sbjct: 123 ITVLPSASEFDTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSV-------YVDEEMCYED 181

Query: 207 VSLWSY 212
           +SLWSY
Sbjct: 183 LSLWSY 181

The following BLAST results are available for this feature:

BLAST of Lsi05G012660.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ93	2.0e-59	57.92	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	7.5e-59	61.71	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
P93835	7.5e-59	60.45	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	4.9e-58	58.56	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
Q9SGJ6	1.6e-45	54.30	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Lsi05G012660.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A140DCV6	4.4e-110	96.70	CRT/DRE-binding factor 1 OS=Cucumis melo OX=3656 GN=LOC103484041 PE=2 SV=1	[more]
A0A5A7SWS3	4.4e-110	96.70	Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX...	[more]
A0A5D3DFF6	1.7e-109	96.23	Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX...	[more]
A0A0A0L9N0	1.7e-106	94.37	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180260 PE=...	[more]
A0A6J1EAB5	3.0e-103	89.57	dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=...	[more]

BLAST of Lsi05G012660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001315370.1	9.0e-110	96.70	dehydration-responsive element-binding protein 1A [Cucumis melo] >AMK37721.1 CRT...	[more]
TYK22275.1	3.4e-109	96.23	dehydration-responsive element-binding protein 1A [Cucumis melo var. makuwa]	[more]
XP_038900545.1	8.4e-108	94.79	dehydration-responsive element-binding protein 1A-like [Benincasa hispida]	[more]
XP_004140794.1	3.5e-106	94.37	dehydration-responsive element-binding protein 1A [Cucumis sativus] >KGN57337.1 ...	[more]
XP_023522016.1	2.1e-103	90.05	dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pe...	[more]

BLAST of Lsi05G012660.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51990.1	1.4e-60	57.92	C-repeat-binding factor 4	[more]
AT4G25480.1	5.3e-60	61.71	dehydration response element B1A	[more]
AT4G25490.1	5.3e-60	60.45	C-repeat/DRE binding factor 1	[more]
AT4G25470.1	3.5e-59	58.56	C-repeat/DRE binding factor 2	[more]
AT1G63030.1	1.2e-46	54.30	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 54..65 score: 66.06 coord: 76..92 score: 70.05
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 53..116 e-value: 6.2E-30 score: 115.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 52..102 e-value: 1.3E-15 score: 57.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 53..110 score: 22.365511
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 54..112 e-value: 1.15554E-31 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 53..111 e-value: 1.7E-23 score: 84.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..163
None	No IPR available	PANTHER	PTHR31839:SF53	AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR	coord: 14..211
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 14..211
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 53..112

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G012660	Lsi05G012660	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G012660.1.exon.1	Lsi05G012660.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G012660.1.CDS.1	Lsi05G012660.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G012660.1	Lsi05G012660.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006952	defense response
biological_process	GO:0009873	ethylene-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity