Lsi05G006510.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G006510.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Spindle pole body component protein
Location	chr05: 8279287 .. 8280451 (+)
Sequence length	1049
RNA-Seq Expression	Lsi05G006510.1
Synteny	Lsi05G006510.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATACCCAACGCTTTCTATAAATTGAGAAGCAAGTCCTCTCAACTGAGGGAACTCACCTCCACCACGAATTGTCGGAATTCTACGACGGACGACGGAGCGGAAAATGGATTCCTGCCTAATCGGTCAATGGTAGCGATTGTAAATTTTTGGTACTTTCAACCTCGCTTCTTCCCCGGAGTCAGATCAGAGCCGTCGTTCTCGTTCTGACCACTCTTCTTCCACGAGAGACTCGCCGGAGCGGTTAGTTTCCCGATGAAATTCCTTTTCGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGGTACGTTATTGTTTGTCAGTTCATGAATCTTCCGTATGATTTTCGAAACCGTAAAGATCCGTGAAACGAAAACGACATCTGAAAAGAATCTTTCTGTTATTTTCTCTCTCTCTCAGCCTCAGGCGAAGTCCTGCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGATTCAATTACTCTTCCACTTTCCGATCACTCATGGCTGTGTAGTATATATATATATATAGTTTTATCATTTAGGTTGGTTGCTGTAATTTGTATAATTATTAATTATGATTTGGAAACAGAAAGCTGAGATTATTGAGGAAGAAAACTTTGTCCATGGAAGTTATTGCAGCTTGTTTGAGTGCTTTCTTTAATGGGGACTCTCTGCAATTTAAATGTTCCCATTTTTCCTCATCATGCTTTGCTTATTTCTCTGATTTCCATGCCGTTTTGGATTATTCTTAGAGCAAGAATGTTCAATCTGTTTATGATTCTTTACACAATTGCGTTGAAGAAACTTAATTTTGGTTCTTCAAGTTTAAGTTCTAT

mRNA sequence

CAATACCCAACGCTTTCTATAAATTGAGAAGCAAGTCCTCTCAACTGAGGGAACTCACCTCCACCACGAATTGTCGGAATTCTACGACGGACGACGGAGCGGAAAATGGATTCCTGCCTAATCGGTCAATGGTAGCGATTGTAAATTTTTGGTACTTTCAACCTCGCTTCTTCCCCGGAGTCAGATCAGAGCCGTCGTTCTCGTTCTGACCACTCTTCTTCCACGAGAGACTCGCCGGAGCGGTTAGTTTCCCGATGAAATTCCTTTTCGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCTGCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGATTCAATTACTCTTCCACTTTCCGATCACTCATGGCTGTGTAGTATATATATATATATAGTTTTATCATTTAGGTTGGTTGCTGTAATTTGTATAATTATTAATTATGATTTGGAAACAGAAAGCTGAGATTATTGAGGAAGAAAACTTTGTCCATGGAAGTTATTGCAGCTTGTTTGAGTGCTTTCTTTAATGGGGACTCTCTGCAATTTAAATGTTCCCATTTTTCCTCATCATGCTTTGCTTATTTCTCTGATTTCCATGCCGTTTTGGATTATTCTTAGAGCAAGAATGTTCAATCTGTTTATGATTCTTTACACAATTGCGTTGAAGAAACTTAATTTTGGTTCTTCAAGTTTAAGTTCTAT

Coding sequence (CDS)

ATGAAATTCCTTTTCGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCTGCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA

Protein sequence

MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

Homology

[Close]

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL
Match: A0A0A0L6G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKL 60
           MKFLFEFVSCCVPVNMSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKL
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDF 120
           AADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRKS SRDGESRGV  RNNSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120

Query: 121 SLRRSPAAIPVVIPAFSPTPFLF 143
           SLR+SP+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143

[Close]

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1EVT0 (uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC111438455 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.9e-59
Identity = 126/142 (88.73%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           ADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+NSNDF 
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDF- 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPA+IPVVIPAFSPTPFLF
Sbjct: 121 -RRSPASIPVVIPAFSPTPFLF 140

[Close]

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL
Match: A0A1S3BTM8 (uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 128/143 (89.51%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKL 60
           MKFLFEFVSCCVPVNMSRIENPEETEA   KEMR+LAPITTRKHRRRKRSALLPS AAKL
Sbjct: 1   MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDF 120
           AADWKPSLGAISEDKVVLVVMEREKSDDQ AE ERSVKRKSGSRDGESR V  R NSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQAAELERSVKRKSGSRDGESR-VHGRKNSNDF 120

Query: 121 SLRRSPAAIPVVIPAFSPTPFLF 143
           SLR++P+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQNPSAIPVVIPAFSPAPFLF 142

[Close]

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1JD62 (uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57
Identity = 124/142 (87.32%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPI TRKHRRRKR ALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPIATRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           ADWKPSLGAISEDKVVLV+ EREKSDDQTA SERSVKRKSGSRDGE+RGV  R+NSNDF 
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAGSERSVKRKSGSRDGEARGVNGRSNSNDF- 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPA+IPVVIPAFSPTPFLF
Sbjct: 121 -RRSPASIPVVIPAFSPTPFLF 140

[Close]

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL
Match: A0A6J1FP47 (uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC111447225 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFL EFVSCCVPV++SR+ENPE TEAPG +E+RSLAPITTR HRRR+R AL  SAAK+A
Sbjct: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
            DW PSLGAISED VVLVVMER+KS+D+TAESERSVKRKSGS++G++RGV  RNNSNDF 
Sbjct: 61  GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSQNGKARGVHGRNNSNDF- 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPAAIPVVIPAFSPTPFLF
Sbjct: 121 -RRSPAAIPVVIPAFSPTPFLF 140

[Close]

BLAST of Lsi05G006510.1 vs. NCBI nr
Match: XP_038905048.1 (uncharacterized protein LOC120091204 [Benincasa hispida])

HSP 1 Score: 254.6 bits (649), Expect = 5.0e-64
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSRIENPEETEAPG KE+RSLAPITTRKHRRRKRSA LPSAAKLA
Sbjct: 43  MKFLFEFVSCCVPVNMSRIENPEETEAPGVKEVRSLAPITTRKHRRRKRSASLPSAAKLA 102

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
            DWKPSLGAISEDKVVLVVMEREKSD+QTAESERSVKRKSGSRDGESRGV  RNNSNDFS
Sbjct: 103 VDWKPSLGAISEDKVVLVVMEREKSDEQTAESERSVKRKSGSRDGESRGVHGRNNSNDFS 162

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
           +RRSPAAIPVVIPAFSPTPFLF
Sbjct: 163 IRRSPAAIPVVIPAFSPTPFLF 184

[Close]

BLAST of Lsi05G006510.1 vs. NCBI nr
Match: XP_004149939.2 (uncharacterized protein LOC101213465 [Cucumis sativus] >KGN56182.1 hypothetical protein Csa_011709 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 2.9e-59
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKL 60
           MKFLFEFVSCCVPVNMSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKL
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDF 120
           AADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRKS SRDGESRGV  RNNSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120

Query: 121 SLRRSPAAIPVVIPAFSPTPFLF 143
           SLR+SP+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143

[Close]

BLAST of Lsi05G006510.1 vs. NCBI nr
Match: XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-58
Identity = 126/142 (88.73%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           ADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+NSNDF 
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDF- 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPA+IPVVIPAFSPTPFLF
Sbjct: 121 -RRSPASIPVVIPAFSPTPFLF 140

[Close]

BLAST of Lsi05G006510.1 vs. NCBI nr
Match: KAG6577452.1 (hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.8 bits (595), Expect = 9.2e-58
Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLA
Sbjct: 63  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 122

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           ADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGS DGE+RGV  R+NSNDF 
Sbjct: 123 ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSGDGEARGVNGRSNSNDF- 182

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPA+IPVVIPAFSPTPFLF
Sbjct: 183 -RRSPASIPVVIPAFSPTPFLF 202

[Close]

BLAST of Lsi05G006510.1 vs. NCBI nr
Match: KAG7015524.1 (hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-57
Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSR+E PE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           ADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+NSNDF 
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDF- 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
            RRSPA+IPVVIPAFSPTPFLF
Sbjct: 121 -RRSPASIPVVIPAFSPTPFLF 140

[Close]

BLAST of Lsi05G006510.1 vs. TAIR 10
Match: AT5G54585.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 46/142 (32.39%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 1   MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLA 60
           MKFL E V  C        +  +E+ A    +  S    T  K RRR++   +       
Sbjct: 1   MKFLLELVVPCF-----GSQQFQESAASTADDSVSDETQTLMKQRRRRKRVRVAGQPGQV 60

Query: 61  ADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFS 120
           A+W+PSL  ISE+K  +  +  EK++++     +S     G     S G   R  S+DF 
Sbjct: 61  AEWRPSLSVISENKPAITKIS-EKNEEKKKVRRKSEGNGGGDASSRSGGGHIRFRSDDFG 120

Query: 121 LRRSPAAIPVVIPAFSPTPFLF 143
                 A   VIPAFSPTPF+F
Sbjct: 121 RN----AFEPVIPAFSPTPFMF 132

The following BLAST results are available for this feature:

BLAST of Lsi05G006510.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G006510.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6G1	1.4e-59	90.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1	[more]
A0A6J1EVT0	6.9e-59	88.73	uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A1S3BTM8	1.3e-57	89.51	uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=...	[more]
A0A6J1JD62	1.7e-57	87.32	uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313...	[more]
A0A6J1FP47	1.4e-51	80.28	uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC1114472...	[more]

BLAST of Lsi05G006510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905048.1	5.0e-64	94.37	uncharacterized protein LOC120091204 [Benincasa hispida]	[more]
XP_004149939.2	2.9e-59	90.21	uncharacterized protein LOC101213465 [Cucumis sativus] >KGN56182.1 hypothetical ...	[more]
XP_022932132.1	1.4e-58	88.73	uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 unchar...	[more]
KAG6577452.1	9.2e-58	88.03	hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015524.1	1.6e-57	88.03	hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi05G006510.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54585.1	1.3e-06	32.39	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..123
None	No IPR available	PANTHER	PTHR35318	BNAA10G08410D PROTEIN	coord: 1..142
None	No IPR available	PANTHER	PTHR35318:SF2	BNAA10G08410D PROTEIN	coord: 1..142

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G006510	Lsi05G006510	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G006510.1.exon.2	Lsi05G006510.1.exon.2	exon
Lsi05G006510.1.exon.1	Lsi05G006510.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G006510.1.five_prime_UTR.1	Lsi05G006510.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G006510.1.CDS.1	Lsi05G006510.1.CDS.1	CDS
Lsi05G006510.1.CDS.2	Lsi05G006510.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G006510.1.three_prime_UTR.1	Lsi05G006510.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G006510.1	Lsi05G006510.1-protein	polypeptide