Lsi02G010410.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G010410.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PHLOEM PROTEIN 2-LIKE A9-like
Location	chr02: 11069046 .. 11070358 (+)
Sequence length	718
RNA-Seq Expression	Lsi02G010410.1
Synteny	Lsi02G010410.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGTCTTTCTTTCTTTCTATATTTTTTTTCCCAATACTCTTCCTCTATGAACTCAAAAAAAAAAATATTAAAAAAAAAAAATACTCCTCCTTAGCTATATAAAGCTTCATCACACATCTCTTCTCTCACCATTATTTTCCCAAGAGAGAGCTATATTTGTTCATTCTAGCACAAAGATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGGTATAAATTTGAAACCTCTTGACTATCTAAAGCCTCATTAAATAATTTCTTTCTACATACCAATCTTAGTATCTAACATTATTATTAATTAATTCAATATTTACAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTGTAAGCCATTATATTCATTTCTCTTTCATCAAATACGTCAATATTTTTATTGAAATAGTAAAAATTCATTCATTCATTTTTCTTCTATATATCGATATTATCATCGACATGATTGAAATTTAAGATATCAACATAAAGGGTTATTATAAATAAAAGAGAAAAACTAAACTAACATCGATAATGAATTTTTTTTAACTTATTTTAAAATTTAAAAAAATGAAATAAATATTTATTTAATAATTTAAATATATCTTGTGATTTAAAGAAAAACATCTTTTAACTCTGATTTTTTTCTTATATTTTTATCTGAGAGATTAATAGGGAGTTTTGTTCAAAGAGTTGGAGAGTTGGAGAGAGCAAACTTGTGAACTCCTACTTATTGTTTGGCTCTAAGAATTCGTGGGTCGTGACTAAAAAACAATATTTTCGTTAACATAGATATTTAAAACCTTATTTCAATTAATTACTTTGTAGGAAGGAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

mRNA sequence

CAATGTCTTTCTTTCTTTCTATATTTTTTTTCCCAATACTCTTCCTCTATGAACTCAAAAAAAAAAATATTAAAAAAAAAAAATACTCCTCCTTAGCTATATAAAGCTTCATCACACATCTCTTCTCTCACCATTATTTTCCCAAGAGAGAGCTATATTTGTTCATTCTAGCACAAAGATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

Coding sequence (CDS)

ATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

Protein sequence

MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVEN

Homology

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BLAST of Lsi02G010410.1 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 5   SYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWL 64
           S  S H   D K  +    +  I  P+     WG D+RYW +P++ R    AEL  VSWL
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPR--MPAELKMVSWL 62

Query: 65  EVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSD 124
           EVT S D +E GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    +   
Sbjct: 63  EVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI----KSVS 122

Query: 125 QN---------KFNIPE--DDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAF 178
           QN           NIP+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AF
Sbjct: 123 QNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAF 180

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BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL
Match: A0A5A7TIT6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00100 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNGDPKAIEK KN+KTIIYP  F ITWGND RYWRLPRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGC+VYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCS-DQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD++ S DQNKFN+PEDDLIITVKPP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

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BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL
Match: A0A1S3CAI0 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNGDPKAIEK KN+KTIIYP  F ITWGND RYWRLPRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGC+VYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCS-DQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD++ S DQNKFN+PEDDLIITVKPP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

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BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL
Match: A0A0A0LYD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNG+PKAIEK KNQK IIYP  FTITWGND RYWR PRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCSD-QNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFN+PED+LIITVKPP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

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BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL
Match: A0A6J1GSR3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita moschata OX=3662 GN=LOC111457157 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.4e-78
Identity = 141/181 (77.90%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSF----AAA 60
           MVGF YSSPH  GD KAIEKIKN+KTIIYP    ITWG D+RYWRLP Q R+     AAA
Sbjct: 1   MVGFFYSSPHHKGDQKAIEKIKNKKTIIYPKGLDITWGKDDRYWRLPSQYRNMKDPSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTCSTDNVEAGKSYRVGFN+SM  AAFGWKGC+VYIMAKIGKAG+FVYKK+
Sbjct: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNVSMAPAAFGWKGCDVYIMAKIGKAGRFVYKKM 120

Query: 121 CLDARCSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEK 178
            L+ +CS  NKF++PE+ LIITVKPPPSS GD+ LYFGMYEVWSGRWKGGLKIHHAFVE+
Sbjct: 121 SLENKCSVPNKFSMPEEGLIITVKPPPSSLGDHCLYFGMYEVWSGRWKGGLKIHHAFVEQ 180

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BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL
Match: A0A6J1CMQ3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012691 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 136/178 (76.40%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 6   YSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAAELLQV 65
           YS+PH+NGDPKAIEKIKNQKTIIYP   TITWGNDNRYWRLPR +R    S +AAELLQV
Sbjct: 5   YSTPHYNGDPKAIEKIKNQKTIIYPRGLTITWGNDNRYWRLPRPTRKPKDSSSAAELLQV 64

Query: 66  SWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDAR 125
           SWLE+TCSTDNVEAGKSY+VGFN+SM   AFGWKGCEVY+MAKIGK+GKF+YKKV L+++
Sbjct: 65  SWLEMTCSTDNVEAGKSYKVGFNVSMAPDAFGWKGCEVYVMAKIGKSGKFMYKKVSLESK 124

Query: 126 CSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVEN 180
             D+ KF+I EDDL+I VK P SSPGD+RLYFGMYEVWSG+WKGGL+IHHA V+K+EN
Sbjct: 125 SYDKKKFDILEDDLVIDVKAPSSSPGDHRLYFGMYEVWSGKWKGGLRIHHALVQKIEN 182

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BLAST of Lsi02G010410.1 vs. NCBI nr
Match: XP_008459052.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043222.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa] >TYK21342.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa])

HSP 1 Score: 332.0 bits (850), Expect = 3.1e-87
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNGDPKAIEK KN+KTIIYP  F ITWGND RYWRLPRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGC+VYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCS-DQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD++ S DQNKFN+PEDDLIITVKPP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

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BLAST of Lsi02G010410.1 vs. NCBI nr
Match: XP_038896036.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 156/181 (86.19%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQS----RSFAAA 60
           MVGFSYSSPH NGDPKAIEKIKN++TIIYPN FTITWGNDNRYWRLP QS     S AAA
Sbjct: 1   MVGFSYSSPHSNGDPKAIEKIKNKRTIIYPNGFTITWGNDNRYWRLPPQSSNPKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSYRVGFNLSMT AAFGWKGCEVYIMAKIGKAGK+VYKKV
Sbjct: 61  ELLQVSWLEVTCWTDNVEVGKSYRVGFNLSMTAAAFGWKGCEVYIMAKIGKAGKYVYKKV 120

Query: 121 CLDARCSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEK 178
            LD +CS QNKFN+PE+DLIITV P PSSPGD+RLYFGMYEVWSGRWKGGLKIHHAFVEK
Sbjct: 121 RLDTQCSHQNKFNMPENDLIITVNPLPSSPGDHRLYFGMYEVWSGRWKGGLKIHHAFVEK 180

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BLAST of Lsi02G010410.1 vs. NCBI nr
Match: XP_011660313.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66885.1 hypothetical protein Csa_007686 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNG+PKAIEK KNQK IIYP  FTITWGND RYWR PRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCSD-QNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFN+PED+LIITVKPP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

[Close]

BLAST of Lsi02G010410.1 vs. NCBI nr
Match: XP_038895151.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.2e-84
Identity = 156/185 (84.32%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQS-----RSFAA 60
           MVGF YSSPHF GDPKAIEK+KNQKTIIYP  FTITWGND RYWRLPRQS      S   
Sbjct: 1   MVGFFYSSPHFYGDPKAIEKVKNQKTIIYPKGFTITWGNDKRYWRLPRQSCNRKKESSTG 60

Query: 61  AELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKK 120
           AELLQVSWLEVTC TDNVE GKSYRVGFNLSMT AAFGWKGCEVYIMAKIGKAGKFV KK
Sbjct: 61  AELLQVSWLEVTCWTDNVEVGKSYRVGFNLSMTAAAFGWKGCEVYIMAKIGKAGKFVSKK 120

Query: 121 VCLDARCS-DQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFV 180
           V LD + S DQNKFN+PEDDLIITVKPP SSPGD RLYFGMYEVWSGRWKGGLKIHH FV
Sbjct: 121 VFLDTKGSDDQNKFNMPEDDLIITVKPPSSSPGDTRLYFGMYEVWSGRWKGGLKIHHTFV 180

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BLAST of Lsi02G010410.1 vs. NCBI nr
Match: XP_023519279.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-78
Identity = 142/180 (78.89%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRS---FAAAE 60
           MVG  +SSPH NGDP AIEK++NQKT+IYP  F ITWGNDNRYWRLP QSR+    +AAE
Sbjct: 1   MVGALHSSPHTNGDPNAIEKMENQKTLIYPKGFNITWGNDNRYWRLPPQSRTPMKDSAAE 60

Query: 61  LLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVC 120
           LLQVSWLEVTCSTDNVE GKSY+VGFNLSMT AAFGWKGC VYIMAKIGKAG FVYKKVC
Sbjct: 61  LLQVSWLEVTCSTDNVEVGKSYKVGFNLSMTAAAFGWKGCTVYIMAKIGKAGMFVYKKVC 120

Query: 121 LDARCSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
           LD +   +  F++PE+ L+ITVKPP SSPGDN LYFGMYEVWSGRWKGGLKIHHAFVEKV
Sbjct: 121 LDTK---ETNFDMPEEGLVITVKPPTSSPGDNHLYFGMYEVWSGRWKGGLKIHHAFVEKV 177

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BLAST of Lsi02G010410.1 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 5   SYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWL 64
           S  S H   D K  +    +  I  P+     WG D+RYW +P++ R    AEL  VSWL
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPR--MPAELKMVSWL 62

Query: 65  EVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSD 124
           EVT S D +E GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    +   
Sbjct: 63  EVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI----KSVS 122

Query: 125 QN---------KFNIPE--DDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAF 178
           QN           NIP+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AF
Sbjct: 123 QNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAF 180

[Close]

BLAST of Lsi02G010410.1 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 )

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-33
Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 8   SPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWLEVT 67
           S H+  +    + I  +  +  P+     WG D+RYW +P + R+   AEL +VSWLEVT
Sbjct: 9   SSHYEAESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNEDRT--PAELKKVSWLEVT 68

Query: 68  CSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV-----CLDARC 127
            S D +E GK+YR+GF +S T  A GW    V++ AKIGK G+ ++K++       D   
Sbjct: 69  GSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKLK 128

Query: 128 SDQNKFNIPEDD---LIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
                 NIP++      I V P  +   D +L FG+YEVW+G+WK GL I+ AFVE+V
Sbjct: 129 GGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

The following BLAST results are available for this feature:

BLAST of Lsi02G010410.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA16	2.3e-32	41.30	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 S...	[more]

BLAST of Lsi02G010410.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIT6	1.5e-87	85.33	Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CAI0	1.5e-87	85.33	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE...	[more]
A0A0A0LYD1	1.4e-85	83.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1	[more]
A0A6J1GSR3	6.4e-78	77.90	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita moschata OX=3662 GN=LOC111457...	[more]
A0A6J1CMQ3	1.1e-77	76.40	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Lsi02G010410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459052.1	3.1e-87	85.33	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043222.1 pr...	[more]
XP_038896036.1	1.5e-86	86.19	protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]	[more]
XP_011660313.1	2.9e-85	83.70	protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66885.1 hypothetical prot...	[more]
XP_038895151.1	4.2e-84	84.32	protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]	[more]
XP_023519279.1	3.5e-78	78.89	protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi02G010410.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31200.1	1.6e-33	41.30	phloem protein 2-A9	[more]
AT1G10155.1	3.6e-33	39.33	phloem protein 2-A10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 26..172 e-value: 1.0E-22 score: 80.8
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 11..174
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 11..174

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi02G010410	Lsi02G010410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi02G010410.1.exon.3	Lsi02G010410.1.exon.3	exon
Lsi02G010410.1.exon.2	Lsi02G010410.1.exon.2	exon
Lsi02G010410.1.exon.1	Lsi02G010410.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi02G010410.1.five_prime_UTR.1	Lsi02G010410.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi02G010410.1.CDS.1	Lsi02G010410.1.CDS.1	CDS
Lsi02G010410.1.CDS.2	Lsi02G010410.1.CDS.2	CDS
Lsi02G010410.1.CDS.3	Lsi02G010410.1.CDS.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi02G010410.1	Lsi02G010410.1-protein	polypeptide