Lsi01G014940.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G014940.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	class I heat shock protein-like
Location	chr01: 13015288 .. 13015719 (-)
Sequence length	432
RNA-Seq Expression	Lsi01G014940.1
Synteny	Lsi01G014940.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

mRNA sequence

ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

Coding sequence (CDS)

ATGTCTCTGATTCCAAGTCTGTTTGGCACCAGGGGCGTCTTCGACCCCTTCTTGTCGGATCTTTGGGCACCGACCGCCGCCGGCGAAGTGTCGTCATTCGCCAACACGCAAGTCGATTGGAAGGAGACCCCAGAGGCCCATATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAGGTGAAAGTAGAGGTGGAGGACGGCGGCGTGCTCCAGATCAGCGGCGAGAGGGGCGTCGAGAAGGAGGAGAAGAACGAGAAGTGGCACCGGGTTGAGAGGGGGAAAGGGAAGTTCCTAAGGAGATTCAGGCTGCCGCAGAATGCTAAAGTAGATGAGGTGAAGGCGGCGATGGAGAATGGGGTTCTGACCGTCACTGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGATTAAATCGGTTGAAATCTCGGGCTGA

Protein sequence

MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG

Homology

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BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-53
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP--------------TAAGEVSSFANTQVDWKETP 60
           MSLIPS+FG R   VFDPF  DLW P              + A +V++F N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           P+NAK++EVKA MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

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BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 7.9e-52
Identity = 104/157 (66.24%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP------------TAAGEVSSFANTQVDWKETPEA 60
           MSLIPS+FG R   VFDPF  D++ P              A +V++F N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAK++E+KA+MENGVL+VTVPKVPEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

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BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-51
Identity = 106/157 (67.52%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-------TAAG-----EVSSFANTQVDWKETPEA 60
           MS+IPS FG R   VFDPF  D+W P       T++      E ++F NT +DWKETP+A
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGLKKEEVKVE+E+G VLQISGER  EKEEKN+KWHRVER  GKFLRRFRLP+
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAKVDEVKAAM NGV+TVTVPKV  KKP +K+++ISG
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

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BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-51
Identity = 104/154 (67.53%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 1   MSLIPSLFGTR---GVFDPFLSDLWAP--------TAAGEVSSFANTQVDWKETPEAHIF 60
           MSLIP +FG R    +FDPF  D++ P        T +GE S+FANT++DWKETPE H+F
Sbjct: 1   MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVF 60

Query: 61  KADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAK 120
           K DLPGLKKEEVKVEVE+  VLQISGER VEKE+KN+KWHR+ER  GKF+RRFRLP+NAK
Sbjct: 61  KVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAK 120

Query: 121 VDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           +D+VKA+MENGVLTVTVPK   KKP +KS+EISG
Sbjct: 121 MDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154

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BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-51
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----------TAAGEVSSFANTQVDWKETPEAH 60
           MSL+PS FG R   VFDPF  D+W P             A +V++F N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK++ WHRVER  GKF+RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           AKV+EVKA+MENGVL+VTVPKV E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

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BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL
Match: A0A6J1GDY5 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111453310 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.4e-69
Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGTR +FDPFLSD+WAPT A E SSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA+KSVEISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVEISG 143

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BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL
Match: A0A5A7TT84 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001480 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFG+R VFDPFLSD+WAPT AGEVSSFAN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA KS+EISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL
Match: A0A1S3BK89 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFG+R VFDPFLSD+WAPT AGEVSSFAN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA KS+EISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL
Match: A0A0A0L154 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 131/143 (91.61%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFGTR VFDPFLSD+WA T AGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVT+PKVPEKKPA KS+EI+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]

BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL
Match: A0A6J1ITR2 (18.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478336 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 131/143 (91.61%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGT  +FDPFLSD+WAPT A E SS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA+KSV ISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVAISG 143

[Close]

BLAST of Lsi01G014940.1 vs. NCBI nr
Match: XP_022950131.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGTR +FDPFLSD+WAPT A E SSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA+KSVEISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVEISG 143

[Close]

BLAST of Lsi01G014940.1 vs. NCBI nr
Match: KAG6603616.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGTR +FDPFLSD+WAPT A E SSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 128 MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 187

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV+EVKAAMENG
Sbjct: 188 VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 247

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA+KSVEISG
Sbjct: 248 VLTVTVPKVPEKKPAVKSVEISG 270

[Close]

BLAST of Lsi01G014940.1 vs. NCBI nr
Match: XP_038881342.1 (class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68
Identity = 135/143 (94.41%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFG RGVFDPFLSDLWAP + GEVSSFANTQ+DWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGNRGVFDPFLSDLWAPASVGEVSSFANTQIDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLP NAKVDEVKA MENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPHNAKVDEVKAGMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTV KVPEKKPAIKSVEISG
Sbjct: 121 VLTVTVTKVPEKKPAIKSVEISG 143

[Close]

BLAST of Lsi01G014940.1 vs. NCBI nr
Match: XP_008448675.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK23631.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68
Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFG+R VFDPFLSD+WAPT AGEVSSFAN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVTVPKVPEKKPA KS+EISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of Lsi01G014940.1 vs. NCBI nr
Match: XP_004147911.1 (17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical protein Csa_018077 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67
Identity = 131/143 (91.61%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MSLIPSLFGTRGVFDPFLSDLWAPTAAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSLFGTR VFDPFLSD+WA T AGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVDEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKVDEVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAIKSVEISG 144
           VLTVT+PKVPEKKPA KS+EI+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]

BLAST of Lsi01G014940.1 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 108/159 (67.92%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP--------------TAAGEVSSFANTQVDWKETP 60
           MSLIPS+FG R   VFDPF  DLW P              + A +V++F N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           P+NAK++EVKA MENGVLTV VPK PEKKP +KS++ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi01G014940.1 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 5.6e-53
Identity = 104/157 (66.24%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP------------TAAGEVSSFANTQVDWKETPEA 60
           MSLIPS+FG R   VFDPF  D++ P              A +V++F N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           NAK++E+KA+MENGVL+VTVPKVPEKKP +KS++ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi01G014940.1 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MSLIPSLFGTR--GVFDPFLSDLWAP-----------TAAGEVSSFANTQVDWKETPEAH 60
           MSL+PS FG R   VFDPF  D+W P             A +V++F N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK++ WHRVER  GKF+RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVDEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           AKV+EVKA+MENGVL+VTVPKV E KP +KSV+ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lsi01G014940.1 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 9.2e-48
Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 1   MSLIPSLFG----TRGVFDPFLSDLWAP--------TAAGEVSSFANTQVDWKETPEAHI 60
           MSLIPS FG    +  +FDPF  D+W P        + +GE S+  N +VDWKET EAH+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61  FKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNA 120
           FKADLPG+KKEEVKVE+ED  VL+ISGER VEKEEK + WHRVER  G+F R+F+LP+N 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 121 KVDEVKAAMENGVLTVTVPKVPE--KKPAIKSVEISG 144
           K+D+VKA+MENGVLTVTVPKV E  KK  +KS++ISG
Sbjct: 121 KMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of Lsi01G014940.1 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 9.2e-48
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 0


Query: 1   MSLIPSLFGTR---GVFDPFLSDLWAP-------TAAGEVSSFANTQVDWKETPEAHIFK 60
           MS+IPS F       +FDPF  D+W P       + + E S+  N +VDW+ETPEAH+FK
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFK 60

Query: 61  ADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV 120
           ADLPGLKKEEVKVE+E+  VL+ISGER VEKE+KN+ WHRVER  G+F RRFRLP+N K+
Sbjct: 61  ADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM 120

Query: 121 DEVKAAMENGVLTVTVPKVPEKKPAIKSVEISG 144
           D+VKAAMENGVLTVTVPK   KK  +KS++ISG
Sbjct: 121 DQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

The following BLAST results are available for this feature:

BLAST of Lsi01G014940.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	1.9e-53	67.92	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	7.9e-52	66.24	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27396	1.8e-51	67.52	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P30221	2.3e-51	67.53	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P19036	3.9e-51	66.03	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]

BLAST of Lsi01G014940.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDY5	7.4e-69	93.71	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5A7TT84	1.6e-68	93.01	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BK89	1.6e-68	93.01	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772...	[more]
A0A0A0L154	1.8e-67	91.61	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 S...	[more]
A0A6J1ITR2	1.2e-66	91.61	18.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of Lsi01G014940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950131.1	1.5e-68	93.71	18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18...	[more]
KAG6603616.1	1.5e-68	93.71	17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_038881342.1	2.6e-68	94.41	class I heat shock protein-like [Benincasa hispida]	[more]
XP_008448675.1	3.4e-68	93.01	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1...	[more]
XP_004147911.1	3.7e-67	91.61	17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical...	[more]

BLAST of Lsi01G014940.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.3e-54	67.92	heat shock protein 18.2	[more]
AT1G53540.1	5.6e-53	66.24	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	2.8e-52	66.03	heat shock protein 17.4	[more]
AT1G07400.1	9.2e-48	61.78	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	9.2e-48	62.09	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..143 e-value: 1.4E-45 score: 156.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 14..143
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 39..142 e-value: 3.1E-29 score: 101.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 29..143 score: 31.291426
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..143
None	No IPR available	PANTHER	PTHR11527:SF292	17.6 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..143
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 37..128 e-value: 1.18702E-46 score: 144.37

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G014940	Lsi01G014940	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G014940.1.exon.1	Lsi01G014940.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G014940.1.CDS.1	Lsi01G014940.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G014940.1	Lsi01G014940.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding