Lcy13g016180.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy13g016180.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cytochrome c oxidase subunit 3
Location	Chr13: 45036297 .. 45038307 (+)
Sequence length	660
RNA-Seq Expression	Lcy13g016180.1
Synteny	Lcy13g016180.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTTTGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGATGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTCGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCAGCATGGTACTGGCATTTTGTAGACGTGGTTCGATTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGAAAGAACGAAACAGTGGATTGAGGAATGAAAGCTCGAAGACAAAGAGAACCGGGCTTTTCCAAAGAATTACAGCAGCTTTCCCACTCCCTTTCATTATTATATACAAAAAAGTCTCTTCCACTTTCCTACCAAATCTCTCTTTATTCTGGCACATAAATGAAGGGATCGAAGAGATTATGGCAGATCATGTTCACCAAGAAATGACCCGAAATTGGATCTTGGTCTATTTGAGATTGTTCCTTTTAATCGTAATCAAAGATGTTTTCTTGTCTCTCATTTCTTTTCCGAATAAATCGAAGAACCTAATGGATCGAACTCATCCTTGGCTGCTATGAAACATATCGGCCTTGTGTTGCGGAAGGAACGTTCTGTTCTGTTTTGAGTTGAAGGCAAGAGCTCTTTCTTCAATAAAGGTTTGGAACTCGAATCTTTCCCCAAGGGGAAGAATATGGGCTTGTTGAAGCTATGAAGTAGAGTATTCCATTCCGTTTTTCAGCTGGATCCGGGCTTGGTTCGACCTGAAAAAACGTCGATTTAGTAGAGAGAGGGGCTAAGCAGCTCGACCGATAGGGAGAGGGGCTTTTTGCGAAACGAAAGGCTATCAACGTATACGTTGATAGATATAGTGAGTGTGTGTGCAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTCAGTAAAGTAGTTAACCAAACACAAGTAAGTAGTTCGTCAGTCCTTCCTCCGACGCCTCCCGTTCATTCTGCTGAATTCTTTCATGTTTTTTGTTTTGTTTCGTTCATAGGTCCCAAGCCCTTCTTAGAAAGCCCTCCTTAAGTAAAAAAAAAAGAATGCTGCTTGATTTGAACGAACATTGTAAGAACCTTTCTAACTGACACCCCAGTCATAATGCCACCCACGTCTTTTTTTTTTTGAACAAAGACCTCATTTTTTGTCTTTTTGATTTGAGTTAATAATAAATAACTGGCAGGTTTCATTAATGAAAAGAAAAGCGGAGGCCCGCCATCTGCTAGCATTGTGGTTTGGAATCGATTCTTTATCAATGGCCCACCCTTTCTTTGAACCTTGTCAATGATCTAACTTAAAGATATGAACTGAGTGCCATTTGATGAGTAACGGAGAACAAGGGAGAGGGATATGGAAAGGATGAAGTAATGAAAGAGGAAGTCATTGCTAGTAGTAACGACTTGTCACGATCCATTGGTTCATATAGAATCCATGTCCTAGGTGTATCAAAAAACATTCTTTTCGCTAAGCGTATATAATAAAATAGAGTGAAAGGGTCCACCCCGAAACCAAGGGGGTACTAACTAACAGCTGAGTCCTCTCCGAACCGCAGGAGATAGTTGCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGTGGGTTAG

mRNA sequence

ATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTTTGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGATGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTCGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCAGCATGGTACTGGCATTTTGTAGACGTGGTTCGATTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGAGATAGTTGCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGTGGGTTAG

Coding sequence (CDS)

ATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTTTGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGATGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTCGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCAGCATGGTACTGGCATTTTGTAGACGTGGTTCGATTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGAGATAGTTGCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGTGGGTTAG

Protein sequence

MVLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGDSCPSYGSPTSLASMGGSLRAGSDHLQYTALRRKGLVG

Homology

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot
Match: P14853 (Cytochrome c oxidase subunit 3 OS=Glycine max OX=3847 GN=COX3 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.2e-89
Identity = 160/165 (96.97%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWASSHSSLAPTVEIG IWPP GI VLDP EIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFWASSHSSLAPTVEIGGIWPPLGIWVLDPWEIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot
Match: Q03227 (Cytochrome c oxidase subunit 3 OS=Vicia faba OX=3906 GN=COX3 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.2e-89
Identity = 160/165 (96.97%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FF ASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLG +TKEHHVGFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 220 ICGIRQYLGQMTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot
Match: P08745 (Cytochrome c oxidase subunit 3 OS=Oenothera berteroana OX=3950 GN=COX3 PE=3 SV=2)

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-88
Identity = 162/180 (90.00%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +     FFWASSHSSLAPTVEIG IWPPKGIGVLDP EIPFLNTPILLSSG
Sbjct: 87  ILFIVS--EVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATVSLA+VFTGFQGMEYYQAP TISDSIYGSTF+LAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVSLAIVFTGFQGMEYYQAPPTISDSIYGSTFYLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLF IICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot
Match: P09138 (Cytochrome c oxidase subunit 3 OS=Zea mays OX=4577 GN=COX3 PE=2 SV=2)

HSP 1 Score: 321.6 bits (823), Expect = 6.8e-87
Identity = 160/180 (88.89%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   + SF LFFWASSHSSLAPTVEIG IWPPKGIGVLDP EIP LNTPIL SSG
Sbjct: 87  ILFIVS--EVMSFFLFFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPLLNTPILPSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATV LALV TGFQGMEYYQAP TISDSIYGSTF LAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVLLALVSTGFQGMEYYQAPSTISDSIYGSTFLLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLI+CGIRQYLGHLTK+HHVGFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot
Match: P92514 (Cytochrome c oxidase subunit 3 OS=Arabidopsis thaliana OX=3702 GN=COX3 PE=2 SV=2)

HSP 1 Score: 318.9 bits (816), Expect = 4.4e-86
Identity = 160/180 (88.89%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +  F  FFWA  HSSLAP VEIG IWPPKGI VLDP EIPFLNT ILLSSG
Sbjct: 87  ILFIVS--EVMFFFAFFWAFFHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTLILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL
Match: A0A7D6CA08 (Cytochrome c oxidase subunit 3 OS=Luffa acutangula OX=56866 GN=cox3 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.0e-89
Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +     FFWASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSG
Sbjct: 87  ILFIVS--EVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL
Match: A0A120IH48 (Cytochrome c oxidase subunit 3 OS=Chamaecrista fasciculata OX=53854 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +  F  FFWASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSG
Sbjct: 87  ILFIVS--EVMFFFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL
Match: W6JNI3 (Cytochrome c oxidase subunit 3 OS=Hevea brasiliensis OX=3981 GN=cox3 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWAS HSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFWASFHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL
Match: E9P2B2 (Cytochrome c oxidase subunit 3 OS=Ricinus communis OX=3988 GN=cox3 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.7e-88
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWAS HSSLAPTVEIG IWPPKGIGVLDP EIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFWASFHSSLAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL
Match: A0A3S5HWV6 (Cytochrome c oxidase subunit 3 OS=Acacia ligulata OX=138025 GN=cox3 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LF FVSIYWWGG
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFPFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. NCBI nr
Match: YP_009913616.1 (cytochrome c oxidase subunit 3 [Luffa acutangula] >QLJ93009.1 cytochrome c oxidase subunit 3 [Luffa acutangula])

HSP 1 Score: 338.6 bits (867), Expect = 4.1e-89
Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +     FFWASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSG
Sbjct: 87  ILFIVS--EVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. NCBI nr
Match: AMC32832.1 (cytochrome c oxidase subunit 3 [Chamaecrista fasciculata])

HSP 1 Score: 337.8 bits (865), Expect = 7.0e-89
Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +  F  FFWASSHSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSG
Sbjct: 87  ILFIVS--EVMFFFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. NCBI nr
Match: XP_021666219.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC110654503 [Hevea brasiliensis])

HSP 1 Score: 335.9 bits (860), Expect = 2.6e-88
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWAS HSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 148 FFWASFHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 207

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 208 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 267

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 268 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGG 312

[Close]

BLAST of Lcy13g016180.1 vs. NCBI nr
Match: BAO50912.1 (cytochrome c oxidase subunit 3 [Hevea brasiliensis] >BAO50915.1 cytochrome c oxidase subunit 3 [Hevea brasiliensis])

HSP 1 Score: 335.9 bits (860), Expect = 2.6e-88
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 17  FFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 76
           FFWAS HSSLAPTVEIG IWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE
Sbjct: 100 FFWASFHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKE 159

Query: 77  KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 136
           KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI
Sbjct: 160 KRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLI 219

Query: 137 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 220 ICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. NCBI nr
Match: XP_042453081.1 (cytochrome c oxidase subunit 3 [Zingiber officinale])

HSP 1 Score: 335.9 bits (860), Expect = 2.6e-88
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 14  FLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILA 73
           F  FFWASSHSSLAPTVEIG IWPPKGIGVLDP EIPFLNTPILLSSGAAVTWAHHAILA
Sbjct: 97  FFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILLSSGAAVTWAHHAILA 156

Query: 74  GKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTL 133
           GKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDS+YGSTFFLATGFHGFHVIIGTL
Sbjct: 157 GKEKRAVYALVATVFLALVFTGFQGMEYYQAPFTISDSVYGSTFFLATGFHGFHVIIGTL 216

Query: 134 FLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 182
           FLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 217 FLIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. TAIR 10
Match: AT2G07687.1 (Cytochrome c oxidase, subunit III )

HSP 1 Score: 324.7 bits (831), Expect = 5.7e-89
Identity = 162/180 (90.00%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +  F  FFWASSHSSLAP VEIG IWPPKGI VLDP EIPFLNTPIL SSG
Sbjct: 87  ILFIVS--EVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]

BLAST of Lcy13g016180.1 vs. TAIR 10
Match: ATMG00730.1 (cytochrome c oxidase subunit 3 )

HSP 1 Score: 324.7 bits (831), Expect = 5.7e-89
Identity = 162/180 (90.00%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 2   VLFCLSYRRLCSFLLFFWASSHSSLAPTVEIGCIWPPKGIGVLDPREIPFLNTPILLSSG 61
           +LF +S   +  F  FFWASSHSSLAP VEIG IWPPKGI VLDP EIPFLNTPIL SSG
Sbjct: 87  ILFIVS--EVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSG 146

Query: 62  AAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 121
           AAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
Sbjct: 147 AAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT 206

Query: 122 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGG 181
           GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 207 GFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

The following BLAST results are available for this feature:

BLAST of Lcy13g016180.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14853	4.2e-89	96.97	Cytochrome c oxidase subunit 3 OS=Glycine max OX=3847 GN=COX3 PE=2 SV=1	[more]
Q03227	4.2e-89	96.97	Cytochrome c oxidase subunit 3 OS=Vicia faba OX=3906 GN=COX3 PE=3 SV=1	[more]
P08745	1.2e-88	90.00	Cytochrome c oxidase subunit 3 OS=Oenothera berteroana OX=3950 GN=COX3 PE=3 SV=2	[more]
P09138	6.8e-87	88.89	Cytochrome c oxidase subunit 3 OS=Zea mays OX=4577 GN=COX3 PE=2 SV=2	[more]
P92514	4.4e-86	88.89	Cytochrome c oxidase subunit 3 OS=Arabidopsis thaliana OX=3702 GN=COX3 PE=2 SV=2	[more]

BLAST of Lcy13g016180.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6CA08	2.0e-89	92.78	Cytochrome c oxidase subunit 3 OS=Luffa acutangula OX=56866 GN=cox3 PE=3 SV=1	[more]
A0A120IH48	3.4e-89	92.78	Cytochrome c oxidase subunit 3 OS=Chamaecrista fasciculata OX=53854 PE=3 SV=1	[more]
W6JNI3	1.3e-88	98.18	Cytochrome c oxidase subunit 3 OS=Hevea brasiliensis OX=3981 GN=cox3 PE=3 SV=1	[more]
E9P2B2	1.7e-88	98.18	Cytochrome c oxidase subunit 3 OS=Ricinus communis OX=3988 GN=cox3 PE=3 SV=1	[more]
A0A3S5HWV6	2.2e-88	98.18	Cytochrome c oxidase subunit 3 OS=Acacia ligulata OX=138025 GN=cox3 PE=3 SV=1	[more]

BLAST of Lcy13g016180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913616.1	4.1e-89	92.78	cytochrome c oxidase subunit 3 [Luffa acutangula] >QLJ93009.1 cytochrome c oxida...	[more]
AMC32832.1	7.0e-89	92.78	cytochrome c oxidase subunit 3 [Chamaecrista fasciculata]	[more]
XP_021666219.1	2.6e-88	98.18	LOW QUALITY PROTEIN: uncharacterized protein LOC110654503 [Hevea brasiliensis]	[more]
BAO50912.1	2.6e-88	98.18	cytochrome c oxidase subunit 3 [Hevea brasiliensis] >BAO50915.1 cytochrome c oxi...	[more]
XP_042453081.1	2.6e-88	95.83	cytochrome c oxidase subunit 3 [Zingiber officinale]	[more]

BLAST of Lcy13g016180.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07687.1	5.7e-89	90.00	Cytochrome c oxidase, subunit III	[more]
ATMG00730.1	5.7e-89	90.00	cytochrome c oxidase subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000298	Cytochrome c oxidase subunit III-like	PFAM	PF00510	COX3	coord: 1..180 e-value: 1.3E-76 score: 257.9
IPR000298	Cytochrome c oxidase subunit III-like	PROSITE	PS50253	COX3	coord: 1..181 score: 34.553764
IPR013833	Cytochrome c oxidase, subunit III, 4-helical bundle	GENE3D	1.20.120.80		coord: 1..181 e-value: 6.2E-59 score: 200.8
None	No IPR available	PANTHER	PTHR11403:SF7	CYTOCHROME C OXIDASE SUBUNIT 3	coord: 10..180
IPR024791	Cytochrome c oxidase subunit III	PANTHER	PTHR11403	CYTOCHROME C OXIDASE SUBUNIT III	coord: 10..180
IPR033945	Cytochrome c oxidase subunit III domain	CDD	cd01665	Cyt_c_Oxidase_III	coord: 1..179 e-value: 3.37376E-96 score: 278.63
IPR035973	Cytochrome c oxidase subunit III-like superfamily	SUPERFAMILY	81452	Cytochrome c oxidase subunit III-like	coord: 11..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy13g016180	Lcy13g016180	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy13g016180.1.exon1	Lcy13g016180.1.exon1	exon
Lcy13g016180.1.exon2	Lcy13g016180.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy13g016180.1.cds1	Lcy13g016180.1.cds1	CDS
Lcy13g016180.1.cds2	Lcy13g016180.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy13g016180.1	Lcy13g016180.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019646	aerobic electron transport chain
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism