Lcy13g004630.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy13g004630.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CLAVATA3/ESR (CLE)-related protein 43
Location	Chr13: 3983219 .. 3989804 (-)
Sequence length	585
RNA-Seq Expression	Lcy13g004630.1
Synteny	Lcy13g004630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGGGGTCACGGTTCACTGGCCCAGCCGCCCCCTGCGTTCTACGGATTAGCGCCATCACGAACGCCATTGAAGGATCCAATCTTAATTGGACTCCGAAGCTCTCACCCCAAACCAAAGCAGACTCTGCAATTCCATGCTACAATTTCTCTATCCTCTTCGCTGTCTACACCATTCGCTTTTTCCGTTTCTTCGTTCAAGGTACAGTTCAAATTGAAAAGTTGCTAGGTGCTAGCAATGGCCACACTGCTTCACATTTCACACTCGCTTACTCGTAAATTACGTATACGTACTGGTTCGCCATTGCTGTCCAGAGATGGAGAAGCATTTTCACCACTCTTTTCTTCCTCTCAACTTTTGAACTAGAGTGATGTCAAAGGATTGAAAACCGTGTAAGTAGCACATTCTCCGTCTTATTTACTCCGACGAATTGTTCTTGATTCTCTGTTTTAGTAAGCATTGTTTGTCTGTGGATTTCTTGTTAAATTTACTCTAGTCTAATAAAATTAAACTCGTAGGTTTCCTCTTGATTTAACATACGTGCGAACAATCGGTTTCAAGTTTAAATTCGTGCAATGGTTCATTTAGTTGTCATCGTTTTCAATTTCGTAAATCTAGTGTTAGTCTTTTAGCTCATCTTATATTGTTTGTGATTGCATTAGCTTAGTAAACTTACTCTAGTTTAATGAATTACATTTTAAGCAACCTGTTTTGAGAGTATTCTTATTGTACCAAATTCTTGGTGTTTTGTGAGAGCAGGAGCTTTGGATAATGACTCGTGTCTAAATTTGATAGTAATCTATTACAATTCTGATCTAACTGAAGCATGTCAGCGAGAGGTTAACGAGGATATCTTGGTATACATCAATAGGTGCTGTAGAGATCACCTGACCTAGAAACCAAAACTAGCTCAATATTCTCGAACTTCTCTTAATGAATATTTAGATTAGCTGACTTGGTAAATGGGAGGAAGGGAGAAAACTGCAGTGGTAGAAATTCTCATTCTAGTAACTAGTTTTTCTGTAATATATGACCACCATTTAAATAGTAGAGACAACATTTGAGTAATGGAGACTCATTTATGTTCTCTCTAATATTTAAGTAAGTGGCATGTAGGTGTAGCAAACTAGGCCAACTCTCCACTACAATTAATTAATGAAATCTCACCGACACTTTAGTCTTTGTCGTTCAGGCACTTACTAACAAATATTTTCATAGCACTCTATTCTTTGAAGATCTCTATTTATTGTTGTTCGTAATTAGTAATGATCAAGCACCTTTTATCCTTGGGCAGAGAACATAAATCTGGTTTTTGACACTTGCATATTCATCAGCAACACTCACACACTCTGGGTTAATTTTTTTTTTTTTTTTCATGTGACAAGATCAGTTAATATTTAATTTACCTTGGCGAATTCTTTCATTTATTGACAATTTAGGCAGAACTTCTGAAACTGTTGGTCTTAGTTGAGTGATGTTTCAGGATTTTGAGGGCTGTTCTTTCAACTCATTGTGGGCTCTTGTTTCAGAAACAAAGTGAGACCGAGTTAGATCAATCCAAGTTTGGCGATTTTTTGGATGTTTAAAAGAGAGGAATAAGAGCATTTTCGTTGACAAGAGAATTTTGGTGGAGGAGGCGTGAAAGTTAGATCGCTTTTGACGTTTCTAGCTAGATTTCCGCATGGAAAGTTTCTAATGGTTATGCCTAATTGCGAGCTTTTGGTAGGTTCCTTCTCTATGCAAGGTTCTTATAGCCTTCTAGGCTTCCTTGATGATTTCCTCTTTAAAAATTTGTTTTGCCCTTCCCCAATCAGTAAAATTGTTTCTTATCAGAATAATCGGACACGAAGATCAGCTTTTTTAACCCTCAAAACCTATGTTAACTTTTACTACTGTCGTATCTGCCTCCGAGTAAATTGAAGTTCATAGATCAGAGAGAAAGGATTAGGAGAAAATTTGCACGAAAGAATACAAGACCTATTGGCATCATTTTCCAAAAGCTTAGAACCTACTAGTAAATTTACTTGATGAAAAGATTTCTTTAAGAATCCATTTTGTTCCACATACGAAGCACAAAAAACAAAACAAAACAAAAAGGAGAGAGAAAAAAACACTTATAACTGATGGGCTATTGGCTTTCATCTAGCCATATCCATGTTGACGTTGAATCGTTGATGGCTTCTCATGGAATTCGTTCTTTTCTCCTCATATTTCTTTCCGTAGGTATGAAGAATAGCATGTTAAATCCAACATACATGCTATTAATTTTCGCAATTCCAAGAAAAGATAATGCAGAGACCTGGTTTCTTTAAAATAGTTTGTGCTAAAATAAAGTGGGACCTACTCATTATGGATGTGAGTCTGAACTAGTTTTATTACATCATCGTCTTCTTTCTTAGGAGAATGAGAAAATTCTTTCCAAAGACTCATTCAATTAAAAGGAAGTTTGGAAAGAATAAGATCTCTCATTACTTAAAAATACAGAAAATTTTGGGATTTGATACCATCTTTAGTTAGGCGATGAGTTTGGCACCAAGGAATTCCACTTTTGTGAAAGGGAAGAGCACCTACTTAGTGGTGAGTCCATCTTGATTTTAGGTCTGGCTTTAATACGACACTAGGTTCTAATGAATATTTTCTTTGTATAATGATGAATATTTTCTTTGTATAATGAGTATACTTGTGGGCTAGAGACCCCCGGGACCCATGAATCCATTTATTTGGTCGATCCTTGTGGATCTAGGTTCTATATCGATAAGAAGGTAAAAATGTAAAATCTTTCTTACAAATTAATAGCCATATTACTCTGGCTTTTGATGGAGCGGAAGTGTCTCAATAAAATAATCAACCCTCATTGATATCAAAATGTTGAGGGTTCTACAGAAAATTCACAGTTAAAGTTAAAAATACACTTTTGCTAAGCAAAAGTGTTTCAATTGGCATTTTGTTGTTGCTTCTCTGTTCAGTCCGAGTGATATACTAGGAAGGCCCCCCTACTGCGTCTAATATGTGACCCAAATGCAATGGCTAGAGAGGTCGATGCCTGGACAGTATCATGTGATTAGAAGAGTGATATTAAAGGATAAATGTCCCCTCTTTTTGTCCTCTATTCCTGTGTGGATGTACTAGATAGTCCTTCCATCTTCCCCAAACTACTATTATCATCCCTAACGAGGGTTTAGAAACGACTCTCAATCTTGTAAATTTCGAAGTAATAAAAGCATATTCCATATTGAAATTTTTGGGGAGTGATGATAAATTCTTCTGTGTGATATGGCACCCTGGTGGTATACTAAAGTTCCGTTCAGTTTAACTGGCCGAAATGTTTATTTAATCAATTGCTTTCATAAATAGATGTGTCTACAAAATCACTCTGGGGTTGAAATAACTTCCAATATATCCTACTAAGTTTCAGTTTCACCAGCAATCAATAATCTATGCCTTTAAAACGGCCACAGTATCAATTTCACTTATTCGTATCTGATACAGGGCACCAAGTATCAACATGACACTTATTTTGCGTAAGATTCTGATGTTGCTGTCCGTAATGTAATGGGTGCTTTCTTAATTCTCATCTCAAGTGAATCACTATTTATGGATGCTACAAAATGCATATCTTTTGGAAGATCCTTTTCTCCTTGAAAAGATCATGTCTGATCTCTTCAAAAAAAAAAAAAAAAAAAAAGGATCATGTCTGGTCCGTAATTCATTTTATTTCATGCTGGTGACGTTATCAAGCTAACAATTCTGGAAATTAAAACCTCCCTAAGAATTGTTAGCTTCTTTCAGGTACAGATGCAATTAATAATGCGTATGTACTCAGTACCAGAGAGCGATATGCTCGGGAAACTTCTCCAGTGAAACGCTGCAGAAAGGTGTTTTTTGCAATTGCAATTGCAACTATGCTTCTGAAAAATCTATCGTCACACGTACTCCACGAAGGTTACAGTGGCAAAGTTATCTTCTAAGGCAAGTCGTACAGACTCAGTGGTCGGAATGGCAGCTATGCTTAAAATCCACCCCATCACCTCCACTTCTGGGTATATTAATAATATATCTTTATATTGTTACTTTAGTTGAATTTATGGGTATTGTGTCTCTAATGATATATGATACAGCGCTGTATTATGATCAGGCCGCGTGTAAATTGATGGTGTTCCTGAGCAAAAGCGCTTTTCAAGATGATTGCAGCTTTTTGGTAATCAAGCTAAATTCGGAAGGTTATAATATATTTACAAAATCTCTCATATTTACATTGCAATGTAACTCCAGTGGACTGTCATATACTGATTGCCAAAGGAGAGGCTACTTTGTTGTTGGTGGTTGGAGGGAATATGTTGATTAAGATTTAAGCAAAGAATATTTCAGTCAGTTCGCTACTTTTTGGAGTCAGAGGCAGCTTGTGGTTTGGTTCAATATAGAGAAAACCAAGCTTGTATACAATTCCATGTGAATAGGAAAAGGAAGAAAAGAATGTATTGGAACTTTTAGAAGCTGTCAAATCGGAAGAATTTGAATTCCAATATTTGACCAAGTCATTTGCTTATTCTTCCAATTTCTTTTTTCATTCTCTTTTTATTATTATGATCATTAGTGAGAGAGAATGGAAAAAGGGTTTGGACAGGCAGAAGAAGAAGGCAGAAATGCGAAGGCAAATGGGGGATTGATGAGGCCAAACGGCCAAAAGGAAAAAGCCATAGGTAATAAAAGACAGCCCAAAAGGATTAAAAGGTCATAGGACAGAAGAAGAGTACAAAGTCCAAATAGGAAGCAAAAGTTGCTCAACTTTAATGCCTGCATGGGGCTCAGAATTCAAGATAGGCTTTCTGAAATTGATAGAATGGGACCCTTTCCTTTTGGATGTTCTGCTCTGCGTAGGACATGCCTCATCACTCTTTATTCATCTCATGCCTACCCTGCTCTGCCAAAGAGTAGAAATGTTTTCATTTTCAATTCAACGGTGCCCATGTCCCTTTTTTTTTTTTTTCTTCTTTTTCTTTGGAGTCAGGAGTCCATGTCTTTACGTAACCCAATAAACAATTTAAATATAACCTGTCGTTTAAAAAGTAGATGGTAATTAAAACAACGCATGCGTAATTAATTACTTTAACTCTCTTCTTTATTCTATTATGCCAAATCTACACACCTTAATCGACACAACATTGAATTATACTAGTAGGGGGTGTGCGAGAGTTTTTCTTCAAAACCTATGAGTTACAATAATTACTCATTCAAAAGTTTCATGGGCTTTAACTGCATTTCAAAACACGTTTTTGAAAATTTGAATTATAAAAAAGATTTCTTTTAAAAGCAATACCCCACATTCCCAGTCCACACATATTGAGAAGAGGAAGATGTTGAATCAATCAATAAAAATGGCACTTTTTAAGTGGCCCCAATGGAGAAGAGGAAAATGTTGGATAACCCCTTTCTACAAAAGTAATTTAAAATATACTTTTTTCCAGATTTTCAGAAGCCCCTTTTGATTTATAGCCAAAATAACAAGAAAATTTTGAAAAATAACTTTACATACAAACTATCCTTTTAATTATAATCTCATATTGATATTATCAAAGAGTACTGAAAAGCTTCAGTATTATAATATTATATAGCCTATAAATTAAAATGTTTGGTAGAAATGAGACCAATTGGGAGCTCCCAAAGAGAACTCACATGACTGATGTATCATCAGAAATCATAGAGATGCCAATGCATTCGTCAAGAACAGAGAGCTCTCTCTCGTATTGTCTCCTAATTACTCGAGACGTCCAATGGCAAAACCGTACGTGGCCTCAATGTCTCACGTTATGGGAATCTTAATCATAAAAAAAAAATGTCACCGACATAGTTTGGATTTTGAAATATGGGGAGGCAAAACCATGCTAATATAACTACGTTTTTTGGTTATTGTTAATGTATAGACTCATGAAATTAACTAATTTAATGTGGAAACAGAGTCAAACCTAACTTCCATTATCATATTATATGAAGGTGGACCATTTCAGCCTGCTATTCCCTCATCACGTGGGCCACTCTCTCTCTCTCTCTCTCTTCTCTCTGAGTCCCATTATAGCCGTCTTTTCTTTGCTCTTATATCTCACAGCTAAGCCTCAAATCCATCTCACAGAAAAATTTAAAGAGAGAGAAACAGAAAGACCAAACCCATTTGGGTATGACATTTATACATGTCGAGCCAGAAAGAGGAGGGATTTGAGAGCCATTGAAGTCAAGTTTCATCCAATTTCATTCTTGGTTTTTTCTTCCGGCCGCCGGCCAGCTAGCGATGTGTTCCAGAAGAATCGCCACCTCCCCATCTTTTGCCATACTGATTTTGATCCTATGGGTCTCGCAGATTTGGGTTTGTTGTCACTGCCAAGCCAGAGCTTCACGGATTTTCCCTCCGCCGCAGCCGCACGCGCCGGACAAAACGCTCACCGGCGACGAAAAAGACAACGGCAACGGCAGAAATGAACTTCTCGAAAAGTACTTCAAAGGCAGAGTCTTTGATCGCCAGCGCCACGATGAAGGATTCGAAGATAGCAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCATAATTAG

mRNA sequence

ATGGCCTGGGGTCACGGTTCACTGGCCCAGCCGCCCCCTGCGTTCTACGGATTAGCGCCATCACGAACGCCATTGAAGGATCCAATCTTAATTGGACTCCGAAGCTCTCACCCCAAACCAAAGCAGACTCTGCAATTCCATGCTACAATTTCTCTATCCTCTTCGCTGTCTACACCATTCGCTTTTTCCGTTTCTTCGTTCAAGTTAGGCGATGAGTTTGGCACCAAGGAATTCCACTTTTGTGAAAGGGAAGAGCACCTACTTAGTGGTACAGATGCAATTAATAATGCGTATGTACTCAGTACCAGAGAGCGATATGCTCGGGAAACTTCTCCAGTGAAACGCTGCAGAAAGATTTGGGTTTGTTGTCACTGCCAAGCCAGAGCTTCACGGATTTTCCCTCCGCCGCAGCCGCACGCGCCGGACAAAACGCTCACCGGCGACGAAAAAGACAACGGCAACGGCAGAAATGAACTTCTCGAAAAGTACTTCAAAGGCAGAGTCTTTGATCGCCAGCGCCACGATGAAGGATTCGAAGATAGCAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCATAATTAG

Coding sequence (CDS)

ATGGCCTGGGGTCACGGTTCACTGGCCCAGCCGCCCCCTGCGTTCTACGGATTAGCGCCATCACGAACGCCATTGAAGGATCCAATCTTAATTGGACTCCGAAGCTCTCACCCCAAACCAAAGCAGACTCTGCAATTCCATGCTACAATTTCTCTATCCTCTTCGCTGTCTACACCATTCGCTTTTTCCGTTTCTTCGTTCAAGTTAGGCGATGAGTTTGGCACCAAGGAATTCCACTTTTGTGAAAGGGAAGAGCACCTACTTAGTGGTACAGATGCAATTAATAATGCGTATGTACTCAGTACCAGAGAGCGATATGCTCGGGAAACTTCTCCAGTGAAACGCTGCAGAAAGATTTGGGTTTGTTGTCACTGCCAAGCCAGAGCTTCACGGATTTTCCCTCCGCCGCAGCCGCACGCGCCGGACAAAACGCTCACCGGCGACGAAAAAGACAACGGCAACGGCAGAAATGAACTTCTCGAAAAGTACTTCAAAGGCAGAGTCTTTGATCGCCAGCGCCACGATGAAGGATTCGAAGATAGCAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCATAATTAG

Protein sequence

MAWGHGSLAQPPPAFYGLAPSRTPLKDPILIGLRSSHPKPKQTLQFHATISLSSSLSTPFAFSVSSFKLGDEFGTKEFHFCEREEHLLSGTDAINNAYVLSTRERYARETSPVKRCRKIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEGFEDSKRKIPSCPDPLHN

Homology

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy Swiss-Prot
Match: Q6IWB1 (CLAVATA3/ESR (CLE)-related protein 43 OS=Arabidopsis thaliana OX=3702 GN=CLE43 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 0


Query: 145 LTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEGFEDSKRKIPSCPDPLHN 195
           +T   K+       L ++YFKGR F     +  FEDS R+IPS PD LHN
Sbjct: 47  MTSKNKNKNEDVQRLFQRYFKGRSFGLNNTNSRFEDSNRRIPSSPDRLHN 96

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL
Match: A0A0A0KR66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIF----PPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQR 177
           +IWVCCHCQARASRIF    PPP PH  DK+L+G+EKD  N +N+LL+KYF GR FDR R
Sbjct: 29  QIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKD--NAKNDLLQKYFNGRAFDRHR 88

Query: 178 HDEGFEDSKRKIPSCPDPLHN 195
           HDEGFEDSKRKIPSCPDPLHN
Sbjct: 89  HDEGFEDSKRKIPSCPDPLHN 107

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL
Match: A0A6J1DAV9 (uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018633 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-15
Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEG 177
           +IWVCCHCQARASRI PPP        LTGD K + +G+NEL++KY +GR  DR    EG
Sbjct: 27  QIWVCCHCQARASRILPPP--------LTGDAKHDASGKNELVQKYLRGRASDRH---EG 86

Query: 178 FEDSKRKIPSCPD 191
           FEDSKR++PSC D
Sbjct: 87  FEDSKRRVPSCSD 88

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL
Match: A0A061E6F8 (Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.3e-11
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEG 177
           +IWVCC C+A A RI P    +   K        +  G+ +L +KYF GR F   + D G
Sbjct: 26  QIWVCCDCRAGAIRILP---GNGMRKMTESQGMKDNKGKGDLFQKYFNGRSFSFNKTDRG 85

Query: 178 FEDSKRKIPSCPDPLHN 195
           FE+SKR++PSCPDPLHN
Sbjct: 86  FEESKRRVPSCPDPLHN 99

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL
Match: A0A5D2R859 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G175300v1 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-09
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEG 177
           +IW+C  C+A A R+FP            GDE      R EL + YF G  F  +  D+G
Sbjct: 26  QIWICSDCRAGAIRVFP------------GDEMRKMIERKELFQTYFNGTYFSFKGGDKG 85

Query: 178 FEDSKRKIPSCPDPLHN 195
           FEDSKR++PSCPDPLHN
Sbjct: 86  FEDSKRRVPSCPDPLHN 90

[Close]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL
Match: A0A5J5WIB5 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G159200v1 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-09
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEG 177
           +IW+C  C+A A R+FP            GDE      R EL + YF G  F  +  D+G
Sbjct: 26  QIWICSDCRAGAIRVFP------------GDEMRKMIERKELFQTYFNGTYFSFKGGDKG 85

Query: 178 FEDSKRKIPSCPDPLHN 195
           FEDSKR++PSCPDPLHN
Sbjct: 86  FEDSKRRVPSCPDPLHN 90

[Close]

BLAST of Lcy13g004630.1 vs. NCBI nr
Match: KGN52083.1 (hypothetical protein Csa_008231 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-27
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIF----PPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQR 177
           +IWVCCHCQARASRIF    PPP PH  DK+L+G+EKD  N +N+LL+KYF GR FDR R
Sbjct: 29  QIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKD--NAKNDLLQKYFNGRAFDRHR 88

Query: 178 HDEGFEDSKRKIPSCPDPLHN 195
           HDEGFEDSKRKIPSCPDPLHN
Sbjct: 89  HDEGFEDSKRKIPSCPDPLHN 107

[Close]

BLAST of Lcy13g004630.1 vs. NCBI nr
Match: KAG7032076.1 (CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-26
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEK--DNGNGRNELLEKYFKGRVFDRQRHD 177
           +IWVC HCQARASRIFPPP PH  D TLTGD+K   N N   ELL KYFKG+ FDR R D
Sbjct: 25  QIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRD 84

Query: 178 EGFEDSKRKIPSCPDPLHN 195
           EGFEDSKR+IPSCPDPLHN
Sbjct: 85  EGFEDSKRRIPSCPDPLHN 103

[Close]

BLAST of Lcy13g004630.1 vs. NCBI nr
Match: KAG6601288.1 (CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-26
Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEK--DNGNGRNELLEKYFKGRVFDRQRHD 177
           +IWVC HCQARASRIFPPP PH  D TLTGD+K   N N   ELL KYFKG+ FDR R D
Sbjct: 36  QIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRD 95

Query: 178 EGFEDSKRKIPSCPDPLHN 195
           EGFEDSKR+IPSCPDPLHN
Sbjct: 96  EGFEDSKRRIPSCPDPLHN 114

[Close]

BLAST of Lcy13g004630.1 vs. NCBI nr
Match: KAG6573960.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 53/79 (67.09%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 118 KIWV-CCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVF-DRQRHD 177
           +IWV CC  QARASRIFPPP P  P    T D+ D+ N R ELL+KYFK R F D  RH 
Sbjct: 23  QIWVFCCFSQARASRIFPPPPPPPPPPHTT-DKTDHANRRYELLQKYFKDRAFLDPHRHH 82

Query: 178 EGFEDSKRKIPSCPDPLHN 195
           EGF DSKRKIPSCPDPLHN
Sbjct: 83  EGFVDSKRKIPSCPDPLHN 100

[Close]

BLAST of Lcy13g004630.1 vs. NCBI nr
Match: XP_022150497.1 (uncharacterized protein LOC111018633 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-15
Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 118 KIWVCCHCQARASRIFPPPQPHAPDKTLTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEG 177
           +IWVCCHCQARASRI PPP        LTGD K + +G+NEL++KY +GR  DR    EG
Sbjct: 27  QIWVCCHCQARASRILPPP--------LTGDAKHDASGKNELVQKYLRGRASDRH---EG 86

Query: 178 FEDSKRKIPSCPD 191
           FEDSKR++PSC D
Sbjct: 87  FEDSKRRVPSCSD 88

[Close]

BLAST of Lcy13g004630.1 vs. TAIR 10
Match: AT1G25425.1 (CLAVATA3/ESR-RELATED 43 )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 0


Query: 145 LTGDEKDNGNGRNELLEKYFKGRVFDRQRHDEGFEDSKRKIPSCPDPLHN 195
           +T   K+       L ++YFKGR F     +  FEDS R+IPS PD LHN
Sbjct: 47  MTSKNKNKNEDVQRLFQRYFKGRSFGLNNTNSRFEDSNRRIPSSPDRLHN 96

The following BLAST results are available for this feature:

BLAST of Lcy13g004630.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IWB1	2.8e-04	44.00	CLAVATA3/ESR (CLE)-related protein 43 OS=Arabidopsis thaliana OX=3702 GN=CLE43 P...	[more]

BLAST of Lcy13g004630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR66	1.1e-27	75.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1	[more]
A0A6J1DAV9	1.3e-15	60.27	uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A061E6F8	3.3e-11	46.75	Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 ...	[more]
A0A5D2R859	1.0e-09	46.75	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G175300v1 P...	[more]
A0A5J5WIB5	1.0e-09	46.75	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G159200v1 PE...	[more]

BLAST of Lcy13g004630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52083.1	2.3e-27	75.31	hypothetical protein Csa_008231 [Cucumis sativus]	[more]
KAG7032076.1	2.5e-26	74.68	CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6601288.1	2.5e-26	74.68	CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG6573960.1	1.3e-17	67.09	CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022150497.1	2.6e-15	60.27	uncharacterized protein LOC111018633 [Momordica charantia]	[more]

BLAST of Lcy13g004630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25425.1	2.0e-05	44.00	CLAVATA3/ESR-RELATED 43	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..157
None	No IPR available	PANTHER	PTHR37184:SF2	CLAVATA3/ESR (CLE)-RELATED PROTEIN 27	coord: 118..194
IPR040274	CLAVATA3/ESR (CLE)-related protein 27/43	PANTHER	PTHR37184	CLAVATA3/ESR (CLE)-RELATED PROTEIN 27	coord: 118..194

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy13g004630	Lcy13g004630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy13g004630.1.exon4	Lcy13g004630.1.exon4	exon
Lcy13g004630.1.exon3	Lcy13g004630.1.exon3	exon
Lcy13g004630.1.exon2	Lcy13g004630.1.exon2	exon
Lcy13g004630.1.exon1	Lcy13g004630.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy13g004630.1.cds4	Lcy13g004630.1.cds4	CDS
Lcy13g004630.1.cds3	Lcy13g004630.1.cds3	CDS
Lcy13g004630.1.cds2	Lcy13g004630.1.cds2	CDS
Lcy13g004630.1.cds1	Lcy13g004630.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy13g004630.1	Lcy13g004630.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane