Lcy12g010820.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy12g010820.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L8
Location	Chr12: 38160500 .. 38162772 (-)
Sequence length	1172
RNA-Seq Expression	Lcy12g010820.1
Synteny	Lcy12g010820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCCACCTCTCTCCTTCCCCTTCCCCCAAATCCCCAAAACCCTAATTCCGATCCTCCGATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTTGGAGAGCGAAATGGGTATCTCAAGGGTGTCGTCAGCGAGATCATCCACGATCCGGGCAGGGGTGCGCCGTTGGCCCGTGTGACCTTCCGCCACCCGTTCCGCTACAAGCACCAGAAGGAACTGTTCATCGCCGCCGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGGAAGAAGGCTAACCTTGTCGTCGGTAATGTGCTCCCCATCAGAGCCATTCCCGAAGGTGCTGTGGTTTGTAATGTCGAGCACCATGTGGGTGACCGAGGTGTGTTCGCTAGGTGCTCTGGTGATTATGCTATTGTTATCAGTCACAACCCGGATAATGATACCAGCAGGTATATTTGGATTTCTGTAATTTGTTTTTGTTTTTCAGAAGCGAAGCATGTTTGTTGAAAAATTATGGTTTTTTTTTGCGTCTTTGGTTGATTGCAATCATGTATGTGGTGCTTGTGATGTATTTTGTTGAATGAAGCTTGAACTGAATCGAACAAGTGGGTTTGACTTGAATGTGCCTTTTGTGGTCTGAGATTGCAGATTTTCGATCCTCTGATCTGGGTGATAGTTTACTTTTCTTCTTCATGTTGATTCATGTTGATTCATGTTGTAATATTATTTTTTCTTCATTACTATGAAAAGGCCTACTCTTTCCATTTAGTTTTTCTTAACTTGAAAGTTTCATTTGTGTTCAAGTCCACAAGAAGTAATTTGATTGATATGTGGGTATAGTCTTATTGACACCTTGAAGCAATCTGTGTAAAAAGGATGATTGGAAAGGAAGATGAGAAATTTTAAAGGAATGGGAGTAGAAAGTTTTGTACGACTAGATACATTTAGCTTCTCTGAGTACTTAATCTAATTCTTCTAATTGTTTCTTGTTATCAGTTATTCCTAAATGGAGTTTTCCCCTCTTTCTAACTCCTTAACAATGTCATGTGGTCTTCTTTTCTTTCTATAAGTTCGTTTGATTGATGATAATGTTGTGCTTCTTATAAAAGGAAATTGTTTATCTGTGCCAAGGTAATTGTTAAATGTGTTGTTGGAGTGATGCCTATGGTTAGTAGCTTTACAACATGGAGTTCCTCTTTTCTCATGAACATTTTTATCATAGGAAAACTTGTACTCGTCCAAAATAAAAACTCGCCATATTTATGTTCAATTGCCGAGAGATTAGTTAGTTCTGATTATTGTCTATTCATTTCTCTCAAGAAGGCACATTTGGAGTGCCCTCTTTGGAGTGTGAGCATGTGAAGAATAAGTAGTAGATTCATATTATGAGTCGTGGCATACTTGCTGATATGTTGATTTATCATCTGTGTCACGAAGAAAGTGAAGAAGTTATGAATGCTTGCTAAATTTTGTTCCTTTAGCTTGAGATTTTCCAATTTGATCGATTCAATTCCTACACCACCTTCATCCCAAAATCCTCTCTTTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGTGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTTAAGCGCAACTGCTGGCCCAAGGTTCGTGGTGTTGCCATGAATCCAGTTGAACATCCCCACGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACCGGTCGGCTCCGTGGACAGGCTGCTGCCACTGCTGCCAAGGCCGACAAAGGTGCTTAGAGCAATTCGATCTGTTAAACGTTTATTTTACCTAATCCTTAGCCCCTTCCATTATGTTTGATTGGATTTGCATTATGTTGAAGACCATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAAGATCCTTTTTGAACATAATCCTCTCTCTCCCTTGTTTCTGGTTGCTACAATGAATTTGATGGCATGAACACCAAGCAGTATCTGTCAAAATGATCTATTTAGCTTTCTGATGACAGGTTCAGGGATAACTATTTCTAGACAACTTATTAAATCCAATTTACAATGATATCTCTATAGACAATTTCTTAATTCAAAGTTGTTTCTTA

mRNA sequence

GCGCCACCTCTCTCCTTCCCCTTCCCCCAAATCCCCAAAACCCTAATTCCGATCCTCCGATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTTGGAGAGCGAAATGGGTATCTCAAGGGTGTCGTCAGCGAGATCATCCACGATCCGGGCAGGGGTGCGCCGTTGGCCCGTGTGACCTTCCGCCACCCGTTCCGCTACAAGCACCAGAAGGAACTGTTCATCGCCGCCGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGGAAGAAGGCTAACCTTGTCGTCGGTAATGTGCTCCCCATCAGAGCCATTCCCGAAGGTGCTGTGGTTTGTAATGTCGAGCACCATGTGGGTGACCGAGGTGTGTTCGCTAGGTGCTCTGGTGATTATGCTATTGTTATCAGTCACAACCCGGATAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGTGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTTAAGCGCAACTGCTGGCCCAAGGTTCGTGGTGTTGCCATGAATCCAGTTGAACATCCCCACGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACCGGTCGGCTCCGTGGACAGGCTGCTGCCACTGCTGCCAAGGCCGACAAAGGTGCTTAGAGCAATTCGATCTGTTAAACGTTTATTTTACCTAATCCTTAGCCCCTTCCATTATGTTTGATTGGATTTGCATTATGTTGAAGACCATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAAGATCCTTTTTGAACATAATCCTCTCTCTCCCTTGTTTCTGGTTGCTACAATGAATTTGATGGCATGAACACCAAGCAGTATCTGTCAAAATGATCTATTTAGCTTTCTGATGACAGGTTCAGGGATAACTATTTCTAGACAACTTATTAAATCCAATTTACAATGATATCTCTATAGACAATTTCTTAATTCAAAGTTGTTTCTTA

Coding sequence (CDS)

ATGGGTCGTGTGATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCTCACACCCACCACCGCAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTTGGAGAGCGAAATGGGTATCTCAAGGGTGTCGTCAGCGAGATCATCCACGATCCGGGCAGGGGTGCGCCGTTGGCCCGTGTGACCTTCCGCCACCCGTTCCGCTACAAGCACCAGAAGGAACTGTTCATCGCCGCCGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGGAAGAAGGCTAACCTTGTCGTCGGTAATGTGCTCCCCATCAGAGCCATTCCCGAAGGTGCTGTGGTTTGTAATGTCGAGCACCATGTGGGTGACCGAGGTGTGTTCGCTAGGTGCTCTGGTGATTATGCTATTGTTATCAGTCACAACCCGGATAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCTAGTGGGTGCCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGTGTTAAGCGCAACTGCTGGCCCAAGGTTCGTGGTGTTGCCATGAATCCAGTTGAACATCCCCACGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTCCGCCGTGATGCCCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACCGGTCGGCTCCGTGGACAGGCTGCTGCCACTGCTGCCAAGGCCGACAAAGGTGCTTAG

Protein sequence

MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKGA

Homology

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.6e-143
Identity = 241/259 (93.05%), Postives = 254/259 (98.07%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG ARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQA ATAAKADK
Sbjct: 241 RRTGRLRGQARATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 499.2 bits (1284), Expect = 2.8e-140
Identity = 237/258 (91.86%), Postives = 252/258 (97.67%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-139
Identity = 236/259 (91.12%), Postives = 250/259 (96.53%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVF+SHTHHRKG ARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFR+PFRY HQKELF+AAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 495.7 bits (1275), Expect = 3.1e-139
Identity = 237/258 (91.86%), Postives = 252/258 (97.67%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 449.5 bits (1155), Expect = 2.6e-125
Identity = 215/259 (83.01%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL
Match: A0A6J1CFM0 (60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.5e-148
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKGA 262
           RRTGRLRGQAAATAAKADKGA
Sbjct: 241 RRTGRLRGQAAATAAKADKGA 261

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL
Match: A0A1S3BYI5 (60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.2e-147
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL
Match: A0A0A0L7L1 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403970 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.5e-147
Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL
Match: A0A6J1J2H3 (60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.2e-146
Identity = 256/259 (98.84%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATA+KADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL
Match: A0A6J1FKG6 (60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.2e-146
Identity = 256/259 (98.84%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATA+KADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. NCBI nr
Match: XP_022139448.1 (60S ribosomal protein L8-like [Momordica charantia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.3e-147
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADKGA 262
           RRTGRLRGQAAATAAKADKGA
Sbjct: 241 RRTGRLRGQAAATAAKADKGA 261

[Close]

BLAST of Lcy12g010820.1 vs. NCBI nr
Match: XP_008454581.1 (PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal protein L8 [Benincasa hispida])

HSP 1 Score: 530.4 bits (1365), Expect = 8.7e-147
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. NCBI nr
Match: XP_004151970.1 (60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_011442 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.1e-146
Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATAAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. NCBI nr
Match: KAG7015230.1 (60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.9 bits (1361), Expect = 2.5e-146
Identity = 256/259 (98.84%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATA+KADK
Sbjct: 291 RRTGRLRGQAAATASKADK 309

[Close]

BLAST of Lcy12g010820.1 vs. NCBI nr
Match: XP_022940519.1 (60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal protein L8 [Cucurbita maxima] >XP_023521974.1 60S ribosomal protein L8 [Cucurbita pepo subsp. pepo] >KAG6607833.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.9 bits (1361), Expect = 2.5e-146
Identity = 256/259 (98.84%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKADK 260
           RRTGRLRGQAAATA+KADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]

BLAST of Lcy12g010820.1 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 499.2 bits (1284), Expect = 2.0e-141
Identity = 237/258 (91.86%), Postives = 252/258 (97.67%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           V FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]

BLAST of Lcy12g010820.1 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 495.7 bits (1275), Expect = 2.2e-140
Identity = 237/258 (91.86%), Postives = 252/258 (97.67%), Query Frame = 0


Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120
           VTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATAAKAD 259
           RRTGRLRGQAAA+AAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]

BLAST of Lcy12g010820.1 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-126
Identity = 215/259 (83.01%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH 120
           RV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]

BLAST of Lcy12g010820.1 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 22  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAA 81
           HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +  
Sbjct: 51  HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 110

Query: 82  EGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISH 141
            G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G  AR +G  A +I+ 
Sbjct: 111 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA- 170

Query: 142 NPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW--- 201
             +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG+          CW   
Sbjct: 171 -KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGK 230

Query: 202 -PKVRGVAMNPVEHPHGGG 215
            P VRGV MNPV+HPHGGG
Sbjct: 231 RPVVRGVVMNPVDHPHGGG 233

[Close]

BLAST of Lcy12g010820.1 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 22  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAA 81
           HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +  
Sbjct: 51  HRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYG-----DGEKRYILHP 110

Query: 82  EGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISH 141
            G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G  AR +G  A +I+ 
Sbjct: 111 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA- 170

Query: 142 NPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW--- 201
             +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG+          CW   
Sbjct: 171 -KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS---------KCWLGK 230

Query: 202 -PKVRGVAMNPVEHPHGGG 215
            P VRGV MNPV+HPHGGG
Sbjct: 231 RPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:

BLAST of Lcy12g010820.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29766	3.6e-143	93.05	60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1	[more]
Q42064	2.8e-140	91.86	60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2	[more]
P25998	1.4e-139	91.12	60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1	[more]
P46286	3.1e-139	91.86	60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2	[more]
Q4PSL7	2.6e-125	83.01	60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3	[more]

BLAST of Lcy12g010820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFM0	6.5e-148	99.62	60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=...	[more]
A0A1S3BYI5	4.2e-147	99.61	60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1	[more]
A0A0A0L7L1	5.5e-147	99.23	Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403...	[more]
A0A6J1J2H3	1.2e-146	98.84	60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1	[more]
A0A6J1FKG6	1.2e-146	98.84	60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1	[more]

BLAST of Lcy12g010820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139448.1	1.3e-147	99.62	60S ribosomal protein L8-like [Momordica charantia]	[more]
XP_008454581.1	8.7e-147	99.61	PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal...	[more]
XP_004151970.1	1.1e-146	99.23	60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_...	[more]
KAG7015230.1	2.5e-146	98.84	60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940519.1	2.5e-146	98.84	60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal prot...	[more]

BLAST of Lcy12g010820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36130.1	2.0e-141	91.86	Ribosomal protein L2 family	[more]
AT2G18020.1	2.2e-140	91.86	Ribosomal protein L2 family	[more]
AT3G51190.1	1.8e-126	83.01	Ribosomal protein L2 family	[more]
ATCG00830.1	1.4e-22	31.66	ribosomal protein L2	[more]
ATCG01310.1	1.4e-22	31.66	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 96..231 e-value: 4.2E-68 score: 242.2
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 98..224 e-value: 8.8E-45 score: 151.9
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 11..90 e-value: 6.9E-34 score: 128.6
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 1..255 e-value: 2.2E-70 score: 234.9
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 1..259
None	No IPR available	GENE3D	2.40.50.140		coord: 1..86 e-value: 1.1E-40 score: 139.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR13691:SF48	60S RIBOSOMAL PROTEIN L8	coord: 1..259
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 90..169 e-value: 1.8E-25 score: 90.6
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 170..247 e-value: 1.9E-43 score: 148.7
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 13..90 e-value: 4.4E-19 score: 68.2
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 197..208
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..97
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 99..246

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy12g010820	Lcy12g010820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010820.1.exon2	Lcy12g010820.1.exon2	exon
Lcy12g010820.1.exon1	Lcy12g010820.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010820.1.utr3p1	Lcy12g010820.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010820.1.cds2	Lcy12g010820.1.cds2	CDS
Lcy12g010820.1.cds1	Lcy12g010820.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010820.1.utr5p1	Lcy12g010820.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy12g010820.1	Lcy12g010820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0002181	cytoplasmic translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding