Lcy12g010640.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy12g010640.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Trafficking protein particle complex subunit
Location	Chr12: 37905280 .. 37911365 (+)
Sequence length	1184
RNA-Seq Expression	Lcy12g010640.1
Synteny	Lcy12g010640.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAACAAAAAAACTAAATTTATGAATTAAAATTAAAAAAAAAAAAATTTGATATTTGTTTCTCTACTCCCTTGTGTCTCCGAATAGCACAGTTTTCAGCTCGCGCCGGAACCGCCCTCGCCGTCGGCCACAGTCTTCGCTTTCCGACTCAGTCCCCGTCCTCCGATCGCCGGAACTGTAAGTTTCCGTCTCTGCACTCAAATTCATCTTCCTCCATCAGGGTCAAGGTCAAATCAATTTACTGTAAAAATTTAGTGAAACCCCCAATTTTGATTTCGACCCATAAACGCGCTGCAAGGCCCAAAACTTCACTCATGAGCCACGAAGGCGATTTGGGGTCGTTCAGCCCATAATCCACCAGTCTAAGTGTCTAATACTGTTCTTCACTTGTGTAGCGGCAAGCAACCGGCACAGCGTCTGCTAAAACTTTCCTTTGAGATCAGTTCACGATTCAGATCAATCATGCCTCCCGCTGTTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGGTAAGCTTCTCAACTTCTAGTCTCTCTGTAATTTTCGCTGTTTCTGCTGTTTGGTTTCTGAGGAATTTTAAGATAATGTGTGGGAAGAGATGAAAATTTGATCAGATGTATCCGAAATGGTAAGTTTGTTTTTGATCAAGATGTTCTTTTAATGGTCGTCGATGGGGATGTACATTTTTTAGGTCTTGATTTCATTTCTGTTTTTGGGTCATCTTCTATTGATAAGAAGCTAAAGTTGAATTGATGTAGAATGCGGAGCTGTTTACCTTGACTTATGGAGCAACTGTTCGTCAATTGCTCACAGATCTGGAGGAGGTTGAGGAGGTTAACAAACAGCTCGATCAGATGTAATTTTACTCCACTTGATCCAGTTTCTTTTCAATAACTTTGAATTCTGCATTTTTCCAGAGTTGACTTGTGTTTTTTGTGTGAATGATAGATGAGTCTGAATTAGCTGTTTGCTTTTGTCTTTGCTTTGTGATTTTTTTGGTTATTCATTGGCTCTCATCTTTGCATAAAGGAATTAAAGAATGCGTAGAACAAAGAAATCCATACCTTTGTGATATACAAAGTGTTCTAACATAAACTGAAATGAATTACATTACGCAAAATTCTTTGCTTTCCTTCCATAAAAGTCTTGCAGAAGCTTAATTCATCTCATTGTTAAATAATGTGCATGAATTTTAGTTTGAGAGTTTAAAATAATGTGCATGAGAACTACTATGGATTGACATAGTTGTGTTGGGACATGTGAAAAGAAATAAAGGGACTTTGGGAGAATGGTTCAAACTCTAGTGGCTACCTCCATAAGATAAAATCCTACATGTTTTCTTACTAACCGAATGTTGTAGTGTCAAACAATTATCTATGGAAAAAAATACAGTACATGAGAATGAATGGTATCTCCTGTCTGGTCGGGTGTTTTTTTTAATCTATTTTTTTGTATGTCTTTTCTTGTTCTCTGTACTTTCATCTTCTGCAAGAAAGTCGGTTTTTCATTAAAAAGAAATAGTGTGCATGGCGGGTACATACTAAGCATATTACTTTTTCAATACTTTCAACGTTTATTATTGATAAATAATGAAAAACTCTTTTGTGCATAATTTAATCTCCTTGAGGTAAGACACATTAGATTCAGTGAGATGACTGTTTCTTCAATTGATTTTCAGGGGTTATAATATTGGAATCCGGCTGATTGATGAGTTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTAGGTTGTAGTTGAATACATATGCCAAAGTATTTTTTTTTTTTTTTATATCCGTGAGTGTCCGGGCCAGCTTACGCGCACCTCGACTAATCTCACGGGACAACTGCCTGACCCTACTACATTTGGTTGCCAAGGAAACTCGTAGGATATTAAATATCCTAGGTAGGTGGCCACCATGGATTTATGCCAAAGTATTTTATTCTTTCTGAAAGCCGTCATAAGGCTGTTGAAGTAGCTTTCCCTGTCATCTCCCAATCACACATTGATTGTCACATATTCATATTAACATCTAAATCCTACTCGGTTTAGGAAACCTCTACCATTGTCTCATTAAGTTGGTCCTATCCAAGCCTTTTGGTTTGCCTTGTCTGTCTGAACACTGCTACTTTTGGCGCTAGACAAATTTTTTACCTGCAATTTGGGGTAGCTTTCAAGGACACAGTGTATATATTCTGATGCAGCAGGCTTTTGTTAGTTAGCTAGAATGGATGGATTTCATGGTCATGAGACTCATGACTTTACTATGAAACATGATTTCTCTTATATGCGGGGTTTTGATAAGGGTCCCCTTTTTTTTTTCTTTTTTTTTTCCAATTATTATTATTATTATTATTATTATTAAAATAATAACACCAGCTTTCCTTGAGAAAAAAAATGAAAGAATACAAGGGCATACAAAAAACCAACCCACAAAAAGACCCCTTTAAAGGAAAGGTTGTCAATCCAAAATAATACAACCTAAAGAGTAATTACAAAAAGCCTTAGAAACCGAGGCCCAAAGATAAATATAGAATTTAGTGAGAGCACACACATCAGAAGGACTCCTCTCAAGACCACGAAACACCCTGTTATTTCTCTCACTTCAAAGACCCCATAAAACAGCACACACCCTAGCTAACCATAAAAACCTTCCCTTATTGCAGAACGACGGATGGAGGAGGAACTCCTGGATCATCTCCCTGTAATCTCTGAAGTGTCTCTCCTGTGTCCCGAATGCGTTGTGAAACAAACCCCACATCAAACAAGCAAACTCGCAGTTCCATAAAATATGGTCCAAATCTTCCTTTGTCTTCCAACATAAAATACAACAAAACGAACCAACCAATGAAGTCATCTTCCTCGAGAGCTTATCAATCGTATTAACTCTTCCGTGGATGACTTGCCAGATAAAGAACCTTATCTTCCTCGGGATTTTTACTCTCCACAGAATAGAAAAAACCGACTCGCTAGGGGAAGAGAGGTTGAGAAGGGACCGACAAGAGAAACCCTCAATTGGACTAAGACTCCAACAACGAACATCCCTTCTATCCACCCTAAACTGACAATCCCCTATCAAAGATAAGAGATTAGTAACCTCCGTCGTTTTCCTATTGGTCAAAGATCGACGGAAACCCAACGAGAAGAACATTGAGCTCCCACTATGATTAAGAACATCGGCAATCGATCGGTTTTTCATCGAGGACAAGCGATAAAGATTAGGAAATTTAGAGCAAAGGGAACTATCCCCCACCCACTTGTCCTTCCAAAAATAAATATTATTACCATCCCTTACTTGAAATTGAAGTAGACCCAAAAAAGAAGGGAGCTTGAAAGCAATCTCTCTCCACGGATTCCTAGACATACCCTTGGCCCCTCCCGACAACCATTCATGGGGTGAGTGCCATATTTACTCACAATAATACGGTGCCATAAGGATGTAGACTCGAGGGGAACCGCCACAACCACTTAGCTAACAAGGCTCTGATTGAGCACTCAGTGCAAATCCATCAAAGGCTATGAAACATGATTTCTCTTATATGCGGGGTTTTGATAAGAATGTTAGACACTCGGTGCATTTTACCTACGAGAGGAGAAAGGTAGCAAAAGGTAATGTGTAGTTAGTTGTTAGGAGTGGGAGTGACAGTGAGCATGTCTTTTGGGCAAGTGTGGTCCTTACTTTGTAATAGGAGACAAAAATAGAAGTTTCTGTTAGGAACTTAGGCGTCTGTCTGGGGGAGGAGGGTATACATGTTAGATAGTAGTATTGCCCATGATTGGGTATTCGGGTTTATCTGGTATTTTGGTCTAGAATGTACTCTAGGAAATGAGAGTTCCAGGCCTTTTGAAGGGTGGGGATATTAGCTTATTTTCTTGAAGTCCATGTTGGGCACCTATCTAGGGTATTAAAATTTTGCGAGGTTTCTAGCAACCAATTATTGTTGGGACAAGCGGTTGATTCATGAAATTAGTTGGTTGCATGTAAGCCAGCTGGAACAATTTTATTTACATACACGCACACAAACCCATACTTGTTTCTTTATGTGCATGAGTCAATAGGTTATCTGAGACCTATCAGGCTTCAGAGCCCTTTCTCTTCTTTATGTGCATGGTTAAAAACTTAAAACTCTCGAAACAGCCTTGGATTCAATACATGTTAATAGTTTTTTTTATGCTGCACGTTTTCTTTGGATGCCAACCGTCACCATGCCCCTTGTCCAAAGAAAACATGCCATATAAGACATTGGTCAAAGCCATTGATGTTTTGAGAAATTTAACGAAACCACAATAACCAAATTGAAACATTTAAAATCGTCCAGGCAAACTAAATTGAAGCCACGCACAAATGACTACTCTCCTGTTCATTTGGAATGTTCTTTTTTTCTTTTTTAATAGGTCGGTTTAAAAATGTTCTTGGGGGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTACTGCAACATCTTAAGTGGAGTCATTAGAGGAGCACTTGAGATGGTGAGTTCTCTGCATTTTTTTTCTTAATCTTACTCAATATCATCATCCACCATTATGGCTATTATAGATTTTTCTTTTTCTCAATTTGTTTCTTTCATTTCTTCTTTGCATGTTATTCCTTTGAGAAAATGTTTTCCCCTGTGCTGCAAAATCATGATCAGAAAAAACTTTTGTGTTCTAAGGTCTTTTATCTTCAGCCCAAACTCTGCTTTGTGAGGAAACGCTGGTTTTATCTCTTTCTTTCTTTCTTTTTTTATTTTAAAAAGAAAATTAGCCTTGTGTCTTCATTAAACATCAACATTGAATCTGAAAATAAAGAAGATTTATTGAAGAAATCTTCTCAGAACTTGGTTTAAATGAATTTGTGTTTTAAAATCATTTTCAAGACAGACAGACCTGCTAAATGCCGTTCCAGTAGATTTATGAAAGCTCTTGCTTTCTAAAACATAAAATTGAAAATGGACACCATGATTTATTGTTCTTTCACATGATTGTGAAAATACATTATATGTGTTTTTTTAATATATCTTAAACTTTAAACTAAAAAAGAAAAAAGAGTGAAAAAAACATTCCCTTCTTAAATCTAAATTGAAAAATTACTACCGAACTAACTGATGATGACTCAAAATTCAGCAAATAGAAAAACTAGTTCGAACTTAACGAGGAAAATATCCTAAATTATCAACGAAATCAAACCAAGTAAAACAGTACCCAAATCTTCCTAAAACATCTAACACAGCTAAAACAACCAATATCCACAGGTCTAGCTTCAAGAAAGCTAATTCGATGATTAATTGAGATGATTAATTTCACTACTTATTCAAGTTTATAGTCTAATTCGATGAAATTGAAAGATTGATGTTAAAATTGACTGGTGAAGAATGAAAAATTATCTTAAATCTTATAAATTTGGAGGTATCAGTTCTGTTATTTTCTGATTGTGGTGTGTTGTTGGGGTCAGGTGTCAATGAAAACAGAAGTAACATGGTTACGCGACATGCTGAGAGGGGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAGTACCCATACAAAGATGACGAGTAATATATTTATCTCCCAAAAAGAACACTTTCTATTTCATGTCATTTGTCTCTTTTTTGCTCTGTTCATTTGGTTGATGAAAGATAGTTACATTTTCTAATTCCTCGAACCATCTAACATCTTAATCGAAGTTATATTATATATAATCTTTTTCTGTTGTGATCAATGAAAGCTAATGTAAATAGTAAAGACCTTGGAGAAAATGGGTTCAAGCCATTGGAAGAGGTATCTGTGATCTGATATATCCGAGTTTCTTTAGCAACCTAATGTAGCAGGGTTTGAAGGTTTTCTTGTGAGAATAGTTTGTGAGAATAGTTTGAGTTGCATGCAAGCTCTCTGAACCCTCGTCTTTCTGATTCCTCAAACTAACTAACATCTAA

mRNA sequence

AAGAAAACAAAAAAACTAAATTTATGAATTAAAATTAAAAAAAAAAAAATTTGATATTTGTTTCTCTACTCCCTTGTGTCTCCGAATAGCACAGTTTTCAGCTCGCGCCGGAACCGCCCTCGCCGTCGGCCACAGTCTTCGCTTTCCGACTCAGTCCCCGTCCTCCGATCGCCGGAACTCGGCAAGCAACCGGCACAGCGTCTGCTAAAACTTTCCTTTGAGATCAGTTCACGATTCAGATCAATCATGCCTCCCGCTGTTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGCTGTTTACCTTGACTTATGGAGCAACTGTTCGTCAATTGCTCACAGATCTGGAGGAGGTTGAGGAGGTTAACAAACAGCTCGATCAGATGGGTTATAATATTGGAATCCGGCTGATTGATGAGTTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGTTTAAAAATGTTCTTGGGGGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTACTGCAACATCTTAAGTGGAGTCATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGTTACGCGACATGCTGAGAGGGGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAGTACCCATACAAAGATGACGAGTAATATATTTATCTCCCAAAAAGAACACTTTCTATTTCATGTCATTTGTCTCTTTTTTGCTCTGTTCATTTGGTTGATGAAAGATAGTTACATTTTCTAATTCCTCGAACCATCTAACATCTTAATCGAAGTTATATTATATATAATCTTTTTCTGTTGTGATCAATGAAAGCTAATGTAAATAGTAAAGACCTTGGAGAAAATGGGTTCAAGCCATTGGAAGAGGTATCTGTGATCTGATATATCCGAGTTTCTTTAGCAACCTAATGTAGCAGGGTTTGAAGGTTTTCTTGTGAGAATAGTTTGTGAGAATAGTTTGAGTTGCATGCAAGCTCTCTGAACCCTCGTCTTTCTGATTCCTCAAACTAACTAACATCTAA

Coding sequence (CDS)

ATGCCTCCCGCTGTTCCTCGATCTGGTGATGCAATCTTCGCTAGCGTTGAGCGAGTGAATGCGGAGCTGTTTACCTTGACTTATGGAGCAACTGTTCGTCAATTGCTCACAGATCTGGAGGAGGTTGAGGAGGTTAACAAACAGCTCGATCAGATGGGTTATAATATTGGAATCCGGCTGATTGATGAGTTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTCGGTTTAAAAATGTTCTTGGGGGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTTGTTGAGCTTCCTGATACTTGCCAAGGTCTTCATTACTGCAACATCTTAAGTGGAGTCATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGTTACGCGACATGCTGAGAGGGGACGACACATTCGAATTACAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAGTACCCATACAAAGATGACGAGTAA

Protein sequence

MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYPYKDDE

Homology

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BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot
Match: Q5ZI57 (Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPPC3 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-51
Identity = 92/165 (55.76%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAK+  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  +V +++D L+GD   E+++K ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot
Match: Q86K94 (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=trappc3 PE=3 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-50
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 9   GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS 68
           G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS
Sbjct: 9   GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKS 68

Query: 69  NISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQ 128
            I RC DF ETA+VIAKVG KMFLGVNA V +WDA      + +EDNPL+DFVELPD  +
Sbjct: 69  GIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYK 128

Query: 129 -GLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYP 182
             L+Y NIL GV+RGALEMV MK + T+++  L  D T E++V L + + +  P
Sbjct: 129 HKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot
Match: O55013 (Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trappc3 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-50
Identity = 91/165 (55.15%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot
Match: Q5U1Z2 (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-50
Identity = 91/165 (55.15%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot
Match: O43617 (Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC3 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-49
Identity = 90/165 (54.55%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL
Match: A0A6J1CFG3 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111010320 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETAEVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL
Match: A0A6J1FT71 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111446643 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL
Match: A0A6J1J2K9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111480683 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL
Match: A0A5A7TX50 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00240 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.9e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP A PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL
Match: A0A0A0LAM3 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3G419290 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.9e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP A PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. NCBI nr
Match: XP_022139368.1 (trafficking protein particle complex subunit 3 [Momordica charantia])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETA+VIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETAEVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. NCBI nr
Match: XP_038896395.1 (trafficking protein particle complex subunit 3 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. NCBI nr
Match: XP_022941300.1 (trafficking protein particle complex subunit 3-like [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 4.8e-99
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. NCBI nr
Match: XP_022981618.1 (trafficking protein particle complex subunit 3-like [Cucurbita maxima])

HSP 1 Score: 370.9 bits (951), Expect = 6.3e-99
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPPA PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDMFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. NCBI nr
Match: XP_008454543.1 (PREDICTED: trafficking protein particle complex subunit 3 [Cucumis melo] >XP_011651467.1 trafficking protein particle complex subunit 3 [Cucumis sativus] >KAA0046487.1 trafficking protein particle complex subunit 3 [Cucumis melo var. makuwa] >KGN57989.1 hypothetical protein Csa_009665 [Cucumis sativus] >TYJ97725.1 trafficking protein particle complex subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP A PRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. TAIR 10
Match: AT5G54750.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-92
Identity = 161/186 (86.56%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M P  PRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+VT+WD++GTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFELQVKLLKQVPEEY 180
           VELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD +ELQVKLLKQV EEY
Sbjct: 121 VELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYELQVKLLKQVAEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Lcy12g010640.1 vs. TAIR 10
Match: AT5G54750.2 (Transport protein particle (TRAPP) component )

HSP 1 Score: 327.4 bits (838), Expect = 7.4e-90
Identity = 161/199 (80.90%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MPPAVPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------- 60
           M P  PRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM        
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMYSSSTIYV 60

Query: 61  -----GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTC 120
                GYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+VT+WD++GTC
Sbjct: 61  DSLPWGYNIGIRLIDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTC 120

Query: 121 CSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDTFE 180
           CSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD +E
Sbjct: 121 CSIILEDNPLVDFVELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYE 180

Query: 181 LQVKLLKQVPEEYPYKDDE 187
           LQVKLLKQV EEYPYKDDE
Sbjct: 181 LQVKLLKQVAEEYPYKDDE 199

The following BLAST results are available for this feature:

BLAST of Lcy12g010640.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZI57	6.6e-51	55.76	Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPP...	[more]
Q86K94	2.5e-50	58.62	Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44...	[more]
O55013	5.6e-50	55.15	Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trapp...	[more]
Q5U1Z2	5.6e-50	55.15	Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=...	[more]
O43617	1.6e-49	54.55	Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]

BLAST of Lcy12g010640.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFG3	1.0e-99	98.92	Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1FT71	2.3e-99	98.39	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J2K9	3.0e-99	97.85	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7TX50	8.9e-99	98.39	Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LAM3	8.9e-99	98.39	Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]

BLAST of Lcy12g010640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139368.1	2.2e-99	98.92	trafficking protein particle complex subunit 3 [Momordica charantia]	[more]
XP_038896395.1	2.2e-99	98.92	trafficking protein particle complex subunit 3 [Benincasa hispida]	[more]
XP_022941300.1	4.8e-99	98.39	trafficking protein particle complex subunit 3-like [Cucurbita moschata]	[more]
XP_022981618.1	6.3e-99	97.85	trafficking protein particle complex subunit 3-like [Cucurbita maxima]	[more]
XP_008454543.1	1.8e-98	98.39	PREDICTED: trafficking protein particle complex subunit 3 [Cucumis melo] >XP_011...	[more]

BLAST of Lcy12g010640.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54750.1	1.2e-92	86.56	Transport protein particle (TRAPP) component	[more]
AT5G54750.2	7.4e-90	80.90	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 3..185 e-value: 2.1E-90 score: 303.1
None	No IPR available	PANTHER	PTHR13048:SF5	PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED	coord: 1..186
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 24..171 e-value: 3.0E-36 score: 124.4
IPR016721	Bet3 family	PIRSF	PIRSF018293	TRAPP_1_Bet3	coord: 4..185 e-value: 5.7E-80 score: 264.8
IPR016721	Bet3 family	PANTHER	PTHR13048	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3	coord: 1..186
IPR016721	Bet3 family	CDD	cd14942	TRAPPC3_bet3	coord: 20..174 e-value: 1.01162E-103 score: 292.877
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 18..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy12g010640	Lcy12g010640	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010640.1.utr5p1	Lcy12g010640.1.utr5p1	five_prime_UTR
Lcy12g010640.1.utr5p2	Lcy12g010640.1.utr5p2	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010640.1.exon1	Lcy12g010640.1.exon1	exon
Lcy12g010640.1.exon2	Lcy12g010640.1.exon2	exon
Lcy12g010640.1.exon3	Lcy12g010640.1.exon3	exon
Lcy12g010640.1.exon4	Lcy12g010640.1.exon4	exon
Lcy12g010640.1.exon5	Lcy12g010640.1.exon5	exon
Lcy12g010640.1.exon6	Lcy12g010640.1.exon6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010640.1.cds1	Lcy12g010640.1.cds1	CDS
Lcy12g010640.1.cds2	Lcy12g010640.1.cds2	CDS
Lcy12g010640.1.cds3	Lcy12g010640.1.cds3	CDS
Lcy12g010640.1.cds4	Lcy12g010640.1.cds4	CDS
Lcy12g010640.1.cds5	Lcy12g010640.1.cds5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy12g010640.1.utr3p1	Lcy12g010640.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy12g010640.1	Lcy12g010640.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
cellular_component	GO:0030008	TRAPP complex
cellular_component	GO:0033106	cis-Golgi network membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum