Lcy11g017630.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy11g017630.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein cornichon homolog 4-like
Location	Chr11: 43594045 .. 43596309 (-)
Sequence length	369
RNA-Seq Expression	Lcy11g017630.1
Synteny	Lcy11g017630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGGTAAATTCGAAACCCTAACTCCTATGTTTATGTCGCATTATCTTCAGTTCGAGTTGGGAAAGTAGAATCAATTTGAGTCAAAGACGGTTTAGATCAAAATTTCTACATTTCCAACCATTTCTGAATGTTAATTTGAAGTATATGAGCACTTCGATACGCGTTTTGTTCAGCTTGGAGAGATTAGGGTTTAGTTCAGTTATATTCACATATTCTTCTTCGCTTGTCAATTTGGAAGTACTTTTTAAAGAAACCGTAAATTTCGTAGTGCACCTTGGATTGGATTTGTATTGAGTGCTCCAGTAGTGGCCGGTGATCCTTTTTTTTTTTTGGTTATTATTATTATTTTTCTTTGGATTCCGCATCGAATTATCAATTGCATGTCATGCTCTCTAGCTTTCTTGTTTTAATAATTTGCACTTTTGATTGCTTTCCCCTAATTTCTTGAAAAGATTCTGAGATCAGGGTTTTGCTGGCGGTAAATTGTTTTAAGTTTATTTATGAATACCTATCCTTTTGATCTCATTTGTTATGAGTAAAGTATAACTAAAGTTAAAATTTAAGAATATATAATCTGCTTCCTCTGGGCTGCTTTTGATTCTTGGCATATAGAATTGAAAGATTATGGATGCAATGAGTCACTATAACATGTTGACTGATTCTTAGTTTGAATATTTATTATGGCCCTGAAATTTCTAATGTTGATCTTCAGAGTATCTATTGGTAGAAGCTCAATTTTCAAAGAGGCTAGAAATGACTAATGAGCTTCTACTGAAACATATTCAAAATTTTTAAACCACAGTTTAGGAGTTGTTCAAATCAAGTTTTCCTTTTGTATGAACATATCACTTGCCTCTCTTTGAACTTTTTAAGTATGAAAGATCAAAATTCAAGTTCTTGTTTATTAAATTTATTATTATCTTTATTTTGTGTGTAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGATTTGTGGGCCCTACATATATTATAATGTGAAACTGTAAGTGTTTTCATCCCTCACCTTTGATTGAACTTATTATCTTAATCAAATAACATCTGTTACAATTTTTGTGCACAAAGCTACAAAGATGCCAAGGGATAACCATACTTGCATGATTTTAATGTATTATACTTTTTAACCAAAGAAACACATGATTCGGACAGTTTGAATATAAAAGAAATTTGCTTCTGATTTTGACCATTTAGAAACAACAGAGCCTCCCATTGATTTGACCCTGTTATCTGTTAAGTAATACTTGATGTTGCATTTGATGATTATTCTTAAAGCGATCTACCTCGTAAGGATGGGCTTTCTGTCACTGTCAGGGCATAGCTTAGGTCGGGTTGGTGTATGGTTGTAAGCTACGGCTGCATACAACTGTAGTTTGGATGTGATAGGAGACGCTATTTGGAGAATATATATTGATTCTAATTAAGTTTCTAGTACATATTATATTATCGGAGAAAGGAATCTTAACTGCCTTTGATTTGTTGTATAAGGTATAGTGATGGAGCTTGCTTTGTTTCCATCTCAGAAAATATATGTGTTAGTGTAGAGTAGTCGCGGAACTTCCTTGGTTGAAGAACTAGTTTACCATGCATTGCAGCCATCAGTTTCTGTATTTGGAAGTATTCTCGATTCTCGAGGAGGACTAGAATCAAGGAACACCAAAATTAAAGTTGTTTGATGTTGGACTATGATACTGTATGATTGAGTGGTTAAGGCATCGTTCAAAATAAATGAGGCAGAATTCTGCTCTGGCTCAATGTTGAGGTGTATCTTATACCAGGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCTGAATGGTTAGGTCATAGGTGGTCGTGGCCCTATTTGTTACATTTTTACAGCTCCACAGGATATTGATAGAAACCAAAGAACTGAAATTTTATTAAAAGGTAAACGGGTTATAATGTTCAAGGTACCTGGAACATTCCTCTTGAGTATTCCCAAGACCAAACCAGCTAAACTATTCCCTACCTTCATCTCTGCTCACTCCCTACAACCGTAA

mRNA sequence

ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGCTCCACAGGATATTGATAGAAACCAAAGAACTGAAATTTTATTAAAAGGTAAACGGGTTATAATGTTCAAGGTACCTGGAACATTCCTCTTGAGTATTCCCAAGACCAAACCAGCTAAACTATTCCCTACCTTCATCTCTGCTCACTCCCTACAACCGTAA

Coding sequence (CDS)

ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAATCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGCTCCACAGGATATTGATAGAAACCAAAGAACTGAAATTTTATTAAAAGGTAAACGGGTTATAATGTTCAAGGTACCTGGAACATTCCTCTTGAGTATTCCCAAGACCAAACCAGCTAAACTATTCCCTACCTTCATCTCTGCTCACTCCCTACAACCGTAA

Protein sequence

MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWAPQDIDRNQRTEILLKGKRVIMFKVPGTFLLSIPKTKPAKLFPTFISAHSLQP

Homology

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-25
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC
Sbjct: 1  MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61 LFYLLTGHW 70
          +FYLLTGHW
Sbjct: 61 VFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC
Sbjct: 1  MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61 LFYLLTGHW 70
          +FYL+TGHW
Sbjct: 61 VFYLVTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1  MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61 LFYLLTGHW 70
          L+Y+LTGHW
Sbjct: 61 LYYILTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 22 VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHW 70
          ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW
Sbjct: 14 IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHW 61

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-16
Identity = 37/67 (55.22%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 3  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLF 62
          DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL 
Sbjct: 4  DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63 YLLTGHW 70
          +LLT HW
Sbjct: 64 FLLTWHW 70

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          M DLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEF++MGVLC
Sbjct: 1  MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 62/69 (89.86%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFI++GVLC
Sbjct: 1  MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFIAIGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL
Match: A0A6J1E6H8 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.9e-27
Identity = 61/69 (88.41%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEF+++GVLC
Sbjct: 1  MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAIGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. NCBI nr
Match: KAG7028361.1 (Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-28
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-28
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-28
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVI+PEF+S+GVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVILPEFVSVGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLC
Sbjct: 1  MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61 LFYLLTGHW 70
          LFYLLTGHW
Sbjct: 61 LFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC
Sbjct: 1  MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61 LFYLLTGHW 70
          +FYLLTGHW
Sbjct: 61 VFYLLTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC
Sbjct: 1  MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61 LFYLLTGHW 70
          +FYL+TGHW
Sbjct: 61 VFYLVTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 97.4 bits (241), Expect = 8.2e-21
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLC 60
          MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LC
Sbjct: 1  MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61 LFYLLTGHW 70
          L+Y+LTGHW
Sbjct: 61 LYYILTGHW 69

[Close]

BLAST of Lcy11g017630.1 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 22 VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHW 70
          ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW
Sbjct: 14 IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHW 61

[Close]

BLAST of Lcy11g017630.1 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 37/67 (55.22%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 3  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLF 62
          DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL 
Sbjct: 4  DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63 YLLTGHW 70
          +LLT HW
Sbjct: 64 FLLTWHW 70

The following BLAST results are available for this feature:

BLAST of Lcy11g017630.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	3.1e-25	76.81	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.8e-20	66.67	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	1.2e-19	62.32	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q3EDD7	1.4e-17	79.17	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9C7D7	2.0e-16	55.22	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Lcy11g017630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	4.1e-28	95.65	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1FRW5	1.2e-27	94.20	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	2.0e-27	94.20	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A6J1HL36	4.5e-27	89.86	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]
A0A6J1E6H8	5.9e-27	88.41	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 P...	[more]

BLAST of Lcy11g017630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028361.1	8.5e-28	95.65	Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005595.1	8.5e-28	95.65	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	8.5e-28	95.65	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038876883.1	1.4e-27	94.20	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_022943501.1	2.5e-27	94.20	protein cornichon homolog 4-like [Cucurbita moschata]	[more]

BLAST of Lcy11g017630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	2.2e-26	76.81	Cornichon family protein	[more]
AT1G62880.1	1.3e-21	66.67	Cornichon family protein	[more]
AT4G12090.1	8.2e-21	62.32	Cornichon family protein	[more]
AT1G12340.1	1.0e-18	79.17	Cornichon family protein	[more]
AT3G12180.1	1.4e-17	55.22	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..116 e-value: 7.2E-16 score: 68.7
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..70 e-value: 1.1E-21 score: 77.3
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR12290:SF27	CORNICHON FAMILY PROTEIN	coord: 1..70

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy11g017630	Lcy11g017630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g017630.1.exon3	Lcy11g017630.1.exon3	exon
Lcy11g017630.1.exon2	Lcy11g017630.1.exon2	exon
Lcy11g017630.1.exon1	Lcy11g017630.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g017630.1.cds3	Lcy11g017630.1.cds3	CDS
Lcy11g017630.1.cds2	Lcy11g017630.1.cds2	CDS
Lcy11g017630.1.cds1	Lcy11g017630.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy11g017630.1	Lcy11g017630.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane