Lcy11g014740.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy11g014740.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	60S ribosomal protein L11
Location	Chr11: 31234262 .. 31238041 (+)
Sequence length	189
RNA-Seq Expression	Lcy11g014740.1
Synteny	Lcy11g014740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGAAGAAGAAGTTTTCGAACCCCATGAGGGATATTAAGGTGCATAAACTCGTTCTCAATATCTCAGTCGTTGAGAGCGCAAATCGACTTACCAGAGCTACTAAGGTACTAATTTGTTCCGTGTGGCCAGAGCCCTGTGGTCTCTGAAGGTACATTTTTTGTATGCTTTTGGGAATCAAAGATGCTCTGATACCAAATGATAAAGGAACTATCTCAATTACGTTTGAGAACTCCCTTTATTTCAGGTGAACCCCCACAACAATAATAAGAATAACCCCCTTAACGAAATGATAGACAACCCCAAGAAAGTTAAACAGATTTTGCTTGGAAGGATGATCAAAGATCAAGAAGAAAGGAGAACTCGTTCCTAACTTCAAGATTTCGAACTCTTCACAATCTAATTGATCAGACTACATTGAAAGTCCTAGGCATGCATTCTAAACACAAGAACACAAAGAAAGCATAAAAGCTTGAGAAAGACTAAACTCAATCTGAAATTTCATTCAAATTCAACTTCAACTTGTGTTCAAATGACAAATTACATCTCTATTTATACTAATTGAAAAGACACCATGAAAGGACACAACCTTTCACCTATGTAGCCTAGATTCAACCGCCAACCCTTAAAATCCATACATGAACCATCATAAATACAAATACATGAATTAAATAGGTACATAATGCATTAAATATGATGGATGAATCTGGATTTTAGATTCATTATGCCTCTTGGTTGAAAGGATGTCTTTGTTATGCTTGAAAGGATGCAACTTTTCATCATAATAATTGGATTGAGCTGGTTGATCACTTATTTCCTTATCACTAAGTATGTGTCTTATTGCTTATATGACTGTAGATTTATGGCAAATATTCATTTATTAAGAATCTATTTTGCTCAGGTGCTTGAGAAACTGATCAGCCAGAGCCCTGTGGTCTCTGAAGGTACATTTTTTTCTCATCCCGTACTCATTTGACTTAGATTCTGGAATGGTACGAATGAATATAGGAAAATCCATATTCGAGAAATTTAGAATCTTTAGTTGAAATTGAAACAGGGAAAAATGCAGTTTAGATTCCACTCATAGAAGCCGTTTGGATGAGTTCATATGTTGAGTTTATGAGTTTACATTTTCAGAATTGAACTAAAGTTATTTTTGAAAGATTAGCTTGATATTGGATCTGATATCCTATGTAATTGTTTTGTGGGTTTTCTTTTGTTGTTATTGTGGTCACTGGAGGCTATGAGAGAGAGGTAAATGAGATATTCATAAATTAAATGCATCTAATGAGTTCAAAGGATTGCTTTTGAGAGTATGAAAGATACATGATTACAGAGCCCGGTAAAAATTAGTAAACTTTTTAACAATAATTTTTTTGTATAGTCTTTTGATTCTTTTAATTAGTTTTTTCATGAGAAGTTGCCCGGAGAAAACCTTTATCCTTTGCAGGTACTCAGTTCTTTCGACCCTAGAAAGTCCCTACATTCTGATGTGTATAGTTTGTTCCTAATGAGAAGTAATTATGTAATATTAGAATTCATTTTTTCAGTTATCTTTTCTTGTTCATTTTTGTACGATTATGTTTGTTCCTAATGAGAAGTAAGTGTATAATGTGTATAGTTTCTTTTACTTGAACAAGAAAAGGAAATTATTGTTTTCCATTTCTTATCTTTCCCTTTTTTTTTTCTGTAGGTTGTTGAATTCGGCAGATTAGTTAGTTCATTAAAACTTGATGAACCTGAAGATGTAATTGTATCTGCTTGTCAATAACTGATTGCCATCTTCCATCAAAGACTTGAGTAGAAAATTGTTTATGTTACACAACATTGTCTACTCCCATTAACAGAGTTGCTTGGAAGTTCCAAAAACTTGTGTATGGTTTTTATATTTACCTCATTTATGTGGTTGATTTTTTGTTGGCTTAATGTCACTTTATAGAACTTGTCTATTTCCCATTATTGCAGATTATATGTTCGGTGCTCCAGCTTATCAATCAGATACTTAAGGATAACTAACGTTGACTTCCAAGAAAACGCCTGTCTTGTTGGTCTGGTAAGTCAAATAATGTTTCCATCCAGTAGTGTTCATCAAATAGTAGCATTGATTGAAGCACTGCATTTGGTACATCATCACAAAACTAATTTCTTCACTTGATTTAAAATTCTTTTACCATTTATGTTCCTGTATGCAACTTTACATATTACCATTTTGAACTTGAATACTTGAGATAGCTTGAGTACTGGGGTAAGGTATTTCAATCTGTGTGGGCTTAAATATTCAGTGAAGAATCAAACTCTAATTCTTGCATTAGAAATATGTGGCTGGTTATCAAATGGAGGTTGTTAGTTTTGTTTATTGTACTCATTGTTTCTATCATATATCCCAGTTTTTTAATTAAAAAATTAGTAACTTTTCATATTTTTTCTCCAAGATGCATCTTACGATGTGATCTATTATAACCAAATGTATCTTTTAGCCTCCCAAGTTGTTTAAGATTCTACTCTTCCCCTTTTGATTTATCTTTTGGAGAGCTAGAGAATGACACTACAAGAAAAATGTCTTTTTTATAGCATATGAGTATAGCATTTTTTAATATAGCCTATGAAACGAAAATAAAAGAAAAAAAGAAAAAATCGTAAAAATAATTTTGGGTCGCGCGTGCAACATTGAGGGGGAAAATTTTTGAAATAAGCGTACATCCCTCTTCCACCCCTCGCTTTCTCCCTCTCTTTTATTTTATTCTCTATCTTTTCCCTGATCTTACTGTCATTTCCCTCTCTTTTCCCTCAAATTTTCTTTTTCCTCAATCTCTCTTCATTTCTGAAGCCCTAATTTGCGAGAGAGAGCTTTTTCAACATGACATCGCAAAGAGTTCATGACAATAGTTGTTTTTCCACTACATTTGAGACTTCGAGAACCCAAAGTTCTCAACGGATACTTAAGATGACAACCCACTAAACCCATTTCTTCAAATCGGTTTGTCTCTATATTTATTCTCACTTCCTTCATATCTCCTTTGGTTACCTCTTAAATTTGTGATTCCAAGCTTTTGTGTGCAGTTTTGCTCTTCGCCTAGAGGTTTGACTTCAAGCTTCTGTTAACGGAGATGGTTGAAGGTTTCTAGATCTTGAGAAATATGAGGTAATAAGTAAATCTTTTGAAATGGTGCTTTTATTCTCAAGGATTTCTTTCATCAGTTTTCACTCATTTCTTTCCTCAAACCTTTGAACAAAACCCATAAGCAAACAACCTCGTCCCCCAATTTTTTGCTCTTCATTGCAAACTAATGAAAGAACATTCCTGCTCACTAATAGGTCGGTTTGAACAAGCCTTAGTCTAATCAATCATGTTTAGAACATAAGTTTCCTATTTAAAATTTCATTTGTTAATAAAATATACCTTTGAGTTTGTTTGTTTAGAACATAGGCAATGTAAATGCATATATACAGAGAGACTTTTGTATCTATGGTTTTTGTTGAATATACAATCTTGTAGTTATATGCTCCTCATTGTGACCCTCCAAAACTTACATATTTATATATATTTGTGGGATTTGAAAATAAAGAATATTCTTTTTGTCTAGCTTAGTTTGACATTACATTTTTTAAGTCTTCTTTAAATTGAAGCTTTGTGCGATTAAGTTATGGCTTTTAGTTCTTGAACTAGTATTTTCTATCTTTCCAGTAGTGGCAACAAAATTTTATCTACATAACTTTTTTACTTCCTAATGTTATGTACAGGACAACCCATGTATAGTGTTATGGTGGAGGATTAG

mRNA sequence

ATGGCTTCGAAGAAGAAGTTTTCGAACCCCATGAGGGATATTAAGGTGCATAAACTCGTTCTCAATATCTCAGTCGTTGAGAGCGCAAATCGACTTACCAGAGCTACTAAGGTGCTTGAGAAACTGATCAGCCAGAGCCCTGTGGTCTCTGAAGGACAACCCATGTATAGTGTTATGGTGGAGGATTAG

Coding sequence (CDS)

ATGGCTTCGAAGAAGAAGTTTTCGAACCCCATGAGGGATATTAAGGTGCATAAACTCGTTCTCAATATCTCAGTCGTTGAGAGCGCAAATCGACTTACCAGAGCTACTAAGGTGCTTGAGAAACTGATCAGCCAGAGCCCTGTGGTCTCTGAAGGACAACCCATGTATAGTGTTATGGTGGAGGATTAG

Protein sequence

MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSVMVED

Homology

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-12
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-12
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMR+IKV KLVLNISV ES +RLTRA+KVLE+L  QSPV S+ +
Sbjct: 1  MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMR+IKV KLVLNISV ES +RLTRA+KVLE+L  QSPV S+ +
Sbjct: 1  MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-11
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMR+IKV KLVLNISV ES +RLTRA KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL
Match: A0A4D8YFH5 (Large subunit ribosomal protein L11e OS=Salvia splendens OX=180675 GN=RP-L11e PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSVM 60
          MAS+KK SNPMR+IKV KLVLNISV ES +RLTRA KVLE+L  QSPV S+G+  Y+V+
Sbjct: 1  MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKGKFPYAVV 59

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL
Match: A0A087GLU1 (Ribosomal_L5 domain-containing protein OS=Arabis alpina OX=50452 GN=AALP_AA6G032600 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSV 59
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G+  + V
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGKVFFYV 58

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL
Match: A0A3P5Z4G3 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA06T27503Z PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSVMV 60
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G  M  V +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMFMLLVFI 60

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL
Match: A0A0D3CUN5 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-10
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G+
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGE 53

[Close]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL
Match: A0A3P6A1H7 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA03T14233Z PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-10
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 2  ASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEG--QPMYSV 59
          AS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G  +P Y+V
Sbjct: 3  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMSEPRYTV 61

[Close]

BLAST of Lcy11g014740.1 vs. NCBI nr
Match: VDC68963.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSVMV 60
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G  M  V +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMFMLLVFI 60

[Close]

BLAST of Lcy11g014740.1 vs. NCBI nr
Match: KFK30843.1 (hypothetical protein AALP_AA6G032600 [Arabis alpina])

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQPMYSV 59
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G+  + V
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGKVFFYV 58

[Close]

BLAST of Lcy11g014740.1 vs. NCBI nr
Match: VDC83015.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 73.9 bits (180), Expect = 5.3e-10
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 2  ASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEG--QPMYSV 59
          AS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G  +P Y+V
Sbjct: 3  ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGMSEPRYTV 61

[Close]

BLAST of Lcy11g014740.1 vs. NCBI nr
Match: AAB82139.1 (ribosomal protein [Oryza sativa Indica Group])

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-10
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+LI QSPV S+ +
Sbjct: 1  MASEKKQSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLIGQSPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. NCBI nr
Match: EFH52734.1 (60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-10
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+G+
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKGR 53

[Close]

BLAST of Lcy11g014740.1 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 71.2 bits (173), Expect = 3.2e-13
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 71.2 bits (173), Expect = 3.2e-13
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 71.2 bits (173), Expect = 3.2e-13
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 71.2 bits (173), Expect = 3.2e-13
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1  MASKKKFSNPMRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MAS+KK SNPMRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 53

[Close]

BLAST of Lcy11g014740.1 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-08
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 11 MRDIKVHKLVLNISVVESANRLTRATKVLEKLISQSPVVSEGQ 54
          MRDIKV KLVLNISV ES +RLTRA+KVLE+L  Q+PV S+ +
Sbjct: 1  MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKAR 43

The following BLAST results are available for this feature:

BLAST of Lcy11g014740.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	4.5e-12	71.70	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	4.5e-12	71.70	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
A2YDY2	1.3e-11	71.70	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	1.3e-11	71.70	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]
P46287	1.7e-11	69.81	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]

BLAST of Lcy11g014740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D8YFH5	1.2e-10	69.49	Large subunit ribosomal protein L11e OS=Salvia splendens OX=180675 GN=RP-L11e PE...	[more]
A0A087GLU1	1.5e-10	68.97	Ribosomal_L5 domain-containing protein OS=Arabis alpina OX=50452 GN=AALP_AA6G032...	[more]
A0A3P5Z4G3	1.5e-10	68.33	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA06T27503Z PE=3 SV=...	[more]
A0A0D3CUN5	2.6e-10	73.58	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1	[more]
A0A3P6A1H7	2.6e-10	69.49	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA03T14233Z PE=3 SV=...	[more]

BLAST of Lcy11g014740.1 vs. NCBI nr


Match Name	E-value	Identity	Description
VDC68963.1	3.1e-10	68.33	unnamed protein product [Brassica rapa]	[more]
KFK30843.1	3.1e-10	68.97	hypothetical protein AALP_AA6G032600 [Arabis alpina]	[more]
VDC83015.1	5.3e-10	69.49	unnamed protein product [Brassica rapa]	[more]
AAB82139.1	6.9e-10	75.47	ribosomal protein [Oryza sativa Indica Group]	[more]
EFH52734.1	6.9e-10	73.58	60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]	[more]

BLAST of Lcy11g014740.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	3.2e-13	71.70	ribosomal protein large subunit 16A	[more]
AT3G58700.1	3.2e-13	71.70	Ribosomal L5P family protein	[more]
AT4G18730.1	3.2e-13	71.70	ribosomal protein L16B	[more]
AT5G45775.2	3.2e-13	71.70	Ribosomal L5P family protein	[more]
AT5G45775.1	1.4e-08	69.77	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 9..50 e-value: 4.9E-9 score: 36.4
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 1..55 e-value: 2.8E-10 score: 42.0
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 3..50
None	No IPR available	PANTHER	PTHR11994:SF29	60S RIBOSOMAL PROTEIN L11	coord: 1..52
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 1..52

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy11g014740	Lcy11g014740	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g014740.1.exon1	Lcy11g014740.1.exon1	exon
Lcy11g014740.1.exon2	Lcy11g014740.1.exon2	exon
Lcy11g014740.1.exon3	Lcy11g014740.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy11g014740.1.cds1	Lcy11g014740.1.cds1	CDS
Lcy11g014740.1.cds2	Lcy11g014740.1.cds2	CDS
Lcy11g014740.1.cds3	Lcy11g014740.1.cds3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy11g014740.1	Lcy11g014740.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding