Lcy10g005320.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy10g005320.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	pathogenesis-related protein 1-like
Location	Chr10: 15052735 .. 15053404 (-)
Sequence length	670
RNA-Seq Expression	Lcy10g005320.1
Synteny	Lcy10g005320.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTTAAACCAAGATGGCGGATCTCGTCAAGGTCACCCTCTCTCTCCTTTGTATCTTGAGTAGTTCATTCATGTTCTCCTCTTCTGTTGCCCAAGACTTGCCTCAGGACTACGTCGATGCCCACAACACGGCTCGTGCCCAAGTCGGTGTCGAACCGATCCAGTGGGATGACAGTGTGGCAAACTATGCTCAACAGTATCTCAGCCAACACATCGGGGACTGCCAGATGGTGCACTCGAACGGGCCTTATGGCGAGAATCTTGCGTGGAGCTCGGTCGACTTGTCGGGCACTGATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGATTATGCGTCGAACTCGTGTGTTGGCAACGAGTGCCGCCACTACACACAGGTGGTGTGGAAGAACTCCGTGAGAGTTGGATGTGCAAAAGTGAGATGCAACAATGGCGCTACTCTCATCAGTTGCAACTATGACCCTGCAGGCAATTATGTAAACCAACGACCATACTGAACCATGCCTTCAACTAAAAAACTAAACACTTCTCAGTGAGAGTGTGACTTTAATATTAAGTGGAATGTTTCAAAAAAAGGGTAGTATATCCCTTTTATCTATATATATCTCTCATTTAGTTGGATTGTTGTTTCTCTCTATTATTTGCTATCTTTTGGAGTTTCAT

mRNA sequence

CTTTCTTAAACCAAGATGGCGGATCTCGTCAAGGTCACCCTCTCTCTCCTTTGTATCTTGAGTAGTTCATTCATGTTCTCCTCTTCTGTTGCCCAAGACTTGCCTCAGGACTACGTCGATGCCCACAACACGGCTCGTGCCCAAGTCGGTGTCGAACCGATCCAGTGGGATGACAGTGTGGCAAACTATGCTCAACAGTATCTCAGCCAACACATCGGGGACTGCCAGATGGTGCACTCGAACGGGCCTTATGGCGAGAATCTTGCGTGGAGCTCGGTCGACTTGTCGGGCACTGATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGATTATGCGTCGAACTCGTGTGTTGGCAACGAGTGCCGCCACTACACACAGGTGGTGTGGAAGAACTCCGTGAGAGTTGGATGTGCAAAAGTGAGATGCAACAATGGCGCTACTCTCATCAGTTGCAACTATGACCCTGCAGGCAATTATGTAAACCAACGACCATACTGAACCATGCCTTCAACTAAAAAACTAAACACTTCTCAGTGAGAGTGTGACTTTAATATTAAGTGGAATGTTTCAAAAAAAGGGTAGTATATCCCTTTTATCTATATATATCTCTCATTTAGTTGGATTGTTGTTTCTCTCTATTATTTGCTATCTTTTGGAGTTTCAT

Coding sequence (CDS)

ATGGCGGATCTCGTCAAGGTCACCCTCTCTCTCCTTTGTATCTTGAGTAGTTCATTCATGTTCTCCTCTTCTGTTGCCCAAGACTTGCCTCAGGACTACGTCGATGCCCACAACACGGCTCGTGCCCAAGTCGGTGTCGAACCGATCCAGTGGGATGACAGTGTGGCAAACTATGCTCAACAGTATCTCAGCCAACACATCGGGGACTGCCAGATGGTGCACTCGAACGGGCCTTATGGCGAGAATCTTGCGTGGAGCTCGGTCGACTTGTCGGGCACTGATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGATTATGCGTCGAACTCGTGTGTTGGCAACGAGTGCCGCCACTACACACAGGTGGTGTGGAAGAACTCCGTGAGAGTTGGATGTGCAAAAGTGAGATGCAACAATGGCGCTACTCTCATCAGTTGCAACTATGACCCTGCAGGCAATTATGTAAACCAACGACCATACTGA

Protein sequence

MADLVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY

Homology

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-52
Identity = 92/156 (58.97%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 7   VTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQH 66
           +T  + C ++ + +  SS AQ+ PQDY++ HN AR QVGV P+ WD+ +A YAQ Y +Q 
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 67  IGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVW 126
           IGDC M+HS+GPYGENLA +   L+   AV+MWVDEK+FYDY SNSCVG  C HYTQVVW
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

Query: 127 KNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           +NSVR+GCA+VR NNG   I+CNYDP GN++ QRP+
Sbjct: 124 RNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-52
Identity = 92/139 (66.19%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 24  SVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENL 83
           S AQD PQDY+  HN AR  VGV P+QWD+ VA YA+ Y  Q  G+C+++HS GPYGENL
Sbjct: 24  SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENL 83

Query: 84  AWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVWKNSVRVGCAKVRCNNGA 143
           AW S DLSG  AV MWV EK  Y+YA+N+C G  C HYTQVVW+ SVR+GCAKVRCNNG 
Sbjct: 84  AWGSGDLSGVSAVNMWVSEKANYNYAANTCNG-VCGHYTQVVWRKSVRLGCAKVRCNNGG 143

Query: 144 TLISCNYDPAGNYVNQRPY 163
           T+ISCNYDP GNYVN++PY
Sbjct: 144 TIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 26  AQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENLAW 85
           AQD  QDYV+AHN AR+Q+GV P+QWD+ +A YA+ Y +Q  GDC++VHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 86  SSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVWKNSVRVGCAKVRCNNGATL 145
           S  DLSG  AV +WV+EK  Y+Y +N+C G  C HYTQVVW+NSVR+GCAKVRCNNG T+
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSVRLGCAKVRCNNGGTI 145

Query: 146 ISCNYDPAGNYVNQRPY 163
           ISCNYDP GNY NQ+PY
Sbjct: 146 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.3e-50
Identity = 96/157 (61.15%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 8   TLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHI 67
           TL L  I+S      SS AQ+  QDY+DAHNTARA VGVEP+ WD+ VA YAQ Y+SQ  
Sbjct: 17  TLLLFLIIS-----HSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLA 76

Query: 68  GDCQMVHSNGPYGENLAWSSVD-LSGTDAVQMWVDEKQFYDYASNSCV-GNECRHYTQVV 127
            DC +VHS+G YGENLA  S D ++   AV+MWVDEKQ+YD+ SN+C  G  C HYTQVV
Sbjct: 77  ADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVV 136

Query: 128 WKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           W+NSVRVGCA+V+CNNG  ++SCNYDP GN + Q PY
Sbjct: 137 WRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-49
Identity = 95/157 (60.51%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 8   TLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHI 67
           TL L  I+S      S  AQ+  QDY+DAHNTARA VGVEP+ WDD VA YAQ Y SQ  
Sbjct: 17  TLLLFLIIS-----HSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLA 76

Query: 68  GDCQMVHSNGPYGENLAWSSVD-LSGTDAVQMWVDEKQFYDYASNSCV-GNECRHYTQVV 127
            DC +VHS+G YGENLAW S D L+   AV+MWV+EKQ+Y + SN+C  G  C HYTQVV
Sbjct: 77  ADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVV 136

Query: 128 WKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           W+NSVRVGCA+V+CNNG  ++SCNYDP GN + + PY
Sbjct: 137 WRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL
Match: A0A5D3C4Q0 (Basic form of pathogenesis-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001410 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.6e-72
Identity = 130/164 (79.27%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MADLVK-VTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYA 60
           MADL+K ++LSLL  L+SS +F+SS+AQD PQD+VDAHN ARAQVGV P+ WD++VANYA
Sbjct: 1   MADLLKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYA 60

Query: 61  QQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECR 120
           QQY +QHI DCQMVHSNGPYGENLAWSS DLSGT+AVQMWV+EKQFYDYASNSCVG+ECR
Sbjct: 61  QQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECR 120

Query: 121 HYTQVVWKNSVRVGCAKVRC-NNGATLISCNYDPAGNYVNQRPY 163
           HYTQVVWKNSV++GCAKV C NNG T I+CNYDP+GNYVNQRPY
Sbjct: 121 HYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL
Match: A0A1S3BZL6 (basic form of pathogenesis-related protein 1 OS=Cucumis melo OX=3656 GN=LOC103495331 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.6e-72
Identity = 130/164 (79.27%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MADLVK-VTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYA 60
           MADL+K ++LSLL  L+SS +F+SS+AQD PQD+VDAHN ARAQVGV P+ WD++VANYA
Sbjct: 1   MADLLKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYA 60

Query: 61  QQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECR 120
           QQY +QHI DCQMVHSNGPYGENLAWSS DLSGT+AVQMWV+EKQFYDYASNSCVG+ECR
Sbjct: 61  QQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECR 120

Query: 121 HYTQVVWKNSVRVGCAKVRC-NNGATLISCNYDPAGNYVNQRPY 163
           HYTQVVWKNSV++GCAKV C NNG T I+CNYDP+GNYVNQRPY
Sbjct: 121 HYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL
Match: A0A0A0K7P0 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070254 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.7e-69
Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MADLVK-VTLSLLCIL-SSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANY 60
           MA L+K ++LSLL  L SS+ +F+SS+AQDLPQ++VDAHN ARAQVGV P+ WD++VANY
Sbjct: 1   MALLMKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANY 60

Query: 61  AQQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNEC 120
           AQQY +QHI DCQMVHSNGPYGENLAWSS DLSGT+AVQMWV+EKQFYDYASNSCV +EC
Sbjct: 61  AQQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSEC 120

Query: 121 RHYTQVVWKNSVRVGCAKVRC-NNGATLISCNYDPAGNYVNQRPY 163
           RHYTQVVWKNSV++GCAKV C NNG T I+CNYDP+GNYVNQRPY
Sbjct: 121 RHYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL
Match: A0A6J1GMZ5 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455433 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.6e-65
Identity = 119/159 (74.84%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 4   LVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYL 63
           L+ ++LSLLC+LS+S MF  S+AQD+ QD+VDAHN ARAQVGV PIQWD++VANYA+QY 
Sbjct: 3   LINLSLSLLCVLSTSIMF-PSMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQYA 62

Query: 64  SQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQ 123
           +Q   DCQMVHSNGPYGENLA SS DLS TDAVQMWV+EKQFYDY SNSC+GNECRHYTQ
Sbjct: 63  NQRANDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHYTQ 122

Query: 124 VVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           VVW  SVR+GCAKVRCN+G T I+CNYDP GNY  Q PY
Sbjct: 123 VVWSKSVRIGCAKVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL
Match: A0A2N9H5X4 (SCP domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19954 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.2e-60
Identity = 108/159 (67.92%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 4   LVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYL 63
           ++K++L+++C++S + M   S+AQ+ PQDY++AHN ARA+VGV P++WD  VA+YAQ Y+
Sbjct: 3   MLKISLAIVCVISLANMVHVSLAQNSPQDYLNAHNAARARVGVGPMRWDAKVASYAQNYV 62

Query: 64  SQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQ 123
           ++  G C++VHS GPYGENLAW S DLSGT AV MWV EK  YDY SNSCVG ECRHYTQ
Sbjct: 63  NKLKGSCKLVHSGGPYGENLAWGSNDLSGTAAVNMWVAEKTKYDYNSNSCVGGECRHYTQ 122

Query: 124 VVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           VVW NSVR+GCAKVRCNNGAT+ISCNYDP GNYVNQRPY
Sbjct: 123 VVWSNSVRLGCAKVRCNNGATIISCNYDPPGNYVNQRPY 161

[Close]

BLAST of Lcy10g005320.1 vs. NCBI nr
Match: XP_008455066.1 (PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo] >KAA0031385.1 basic form of pathogenesis-related protein 1 [Cucumis melo var. makuwa] >TYK06837.1 basic form of pathogenesis-related protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 7.5e-72
Identity = 130/164 (79.27%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MADLVK-VTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYA 60
           MADL+K ++LSLL  L+SS +F+SS+AQD PQD+VDAHN ARAQVGV P+ WD++VANYA
Sbjct: 1   MADLLKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYA 60

Query: 61  QQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECR 120
           QQY +QHI DCQMVHSNGPYGENLAWSS DLSGT+AVQMWV+EKQFYDYASNSCVG+ECR
Sbjct: 61  QQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECR 120

Query: 121 HYTQVVWKNSVRVGCAKVRC-NNGATLISCNYDPAGNYVNQRPY 163
           HYTQVVWKNSV++GCAKV C NNG T I+CNYDP+GNYVNQRPY
Sbjct: 121 HYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Lcy10g005320.1 vs. NCBI nr
Match: XP_004136924.2 (pathogenesis-related protein 1 [Cucumis sativus] >KGN43831.1 hypothetical protein Csa_017210 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.7e-69
Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MADLVK-VTLSLLCIL-SSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANY 60
           MA L+K ++LSLL  L SS+ +F+SS+AQDLPQ++VDAHN ARAQVGV P+ WD++VANY
Sbjct: 1   MALLMKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANY 60

Query: 61  AQQYLSQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNEC 120
           AQQY +QHI DCQMVHSNGPYGENLAWSS DLSGT+AVQMWV+EKQFYDYASNSCV +EC
Sbjct: 61  AQQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSEC 120

Query: 121 RHYTQVVWKNSVRVGCAKVRC-NNGATLISCNYDPAGNYVNQRPY 163
           RHYTQVVWKNSV++GCAKV C NNG T I+CNYDP+GNYVNQRPY
Sbjct: 121 RHYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Lcy10g005320.1 vs. NCBI nr
Match: XP_022952869.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 119/159 (74.84%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 4   LVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYL 63
           L+ ++LSLLC+LS+S MF  S+AQD+ QD+VDAHN ARAQVGV PIQWD++VANYA+QY 
Sbjct: 3   LINLSLSLLCVLSTSIMF-PSMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQYA 62

Query: 64  SQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQ 123
           +Q   DCQMVHSNGPYGENLA SS DLS TDAVQMWV+EKQFYDY SNSC+GNECRHYTQ
Sbjct: 63  NQRANDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHYTQ 122

Query: 124 VVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           VVW  SVR+GCAKVRCN+G T I+CNYDP GNY  Q PY
Sbjct: 123 VVWSKSVRIGCAKVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Lcy10g005320.1 vs. NCBI nr
Match: XP_023554792.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554793.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554797.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 3.7e-63
Identity = 117/159 (73.58%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 4   LVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYL 63
           L  +++SLLC+LS+S MF  S+AQD+ QD+VDAHN ARAQVGV PIQWD++VANYA+QY 
Sbjct: 3   LTNLSISLLCVLSTSIMF-PSMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQYA 62

Query: 64  SQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQ 123
           +Q   DCQMVHSNGPYGENLA SS DLS TDAVQMWV+EKQFYDY SNSC+GNECRHYTQ
Sbjct: 63  NQRAKDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHYTQ 122

Query: 124 VVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           VVW  SVR+GCA VRCN+G T I+CNYDP GNY  Q PY
Sbjct: 123 VVWSKSVRIGCATVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Lcy10g005320.1 vs. NCBI nr
Match: KAB1208616.1 (Pathogenesis-related protein 1 [Morella rubra])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 105/157 (66.88%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 6   KVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQ 65
           K+ L+++C+L  + +  S+ AQD P DY+ AHNTARA+VGV P+ WDD+VA+YAQ Y +Q
Sbjct: 5   KLPLAVVCLLGLTIILPSN-AQDTPDDYLSAHNTARAEVGVGPMTWDDNVASYAQNYANQ 64

Query: 66  HIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVV 125
            IGDC +VHS GPYGEN+AWSS D+SGTDAV MWV+EK  YDY SNSC G EC HYTQV+
Sbjct: 65  RIGDCNLVHSGGPYGENIAWSSGDMSGTDAVNMWVNEKSNYDYNSNSCTGGECGHYTQVI 124

Query: 126 WKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           WKNSVR+GCAKVRCN+G T I CNYDP GNY  QRPY
Sbjct: 125 WKNSVRLGCAKVRCNSGGTFIGCNYDPPGNYDGQRPY 160

[Close]

BLAST of Lcy10g005320.1 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-53
Identity = 92/139 (66.19%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 24  SVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENL 83
           S AQD PQDY+  HN AR  VGV P+QWD+ VA YA+ Y  Q  G+C+++HS GPYGENL
Sbjct: 24  SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENL 83

Query: 84  AWSSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVWKNSVRVGCAKVRCNNGA 143
           AW S DLSG  AV MWV EK  Y+YA+N+C G  C HYTQVVW+ SVR+GCAKVRCNNG 
Sbjct: 84  AWGSGDLSGVSAVNMWVSEKANYNYAANTCNG-VCGHYTQVVWRKSVRLGCAKVRCNNGG 143

Query: 144 TLISCNYDPAGNYVNQRPY 163
           T+ISCNYDP GNYVN++PY
Sbjct: 144 TIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Lcy10g005320.1 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-52
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 26  AQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENLAW 85
           AQD  QDYV+AHN AR+Q+GV P+QWD+ +A YA+ Y +Q  GDC++VHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 86  SSVDLSGTDAVQMWVDEKQFYDYASNSCVGNECRHYTQVVWKNSVRVGCAKVRCNNGATL 145
           S  DLSG  AV +WV+EK  Y+Y +N+C G  C HYTQVVW+NSVR+GCAKVRCNNG T+
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSVRLGCAKVRCNNGGTI 145

Query: 146 ISCNYDPAGNYVNQRPY 163
           ISCNYDP GNY NQ+PY
Sbjct: 146 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Lcy10g005320.1 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 87/162 (53.70%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 4   LVKVTLSLLCILSSSFMFSSSVAQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYL 63
           L+K  +  L  ++   +F  S+A+DL Q +++AHN AR +VG++P+ WDD VA YA  Y 
Sbjct: 3   LLKTNILFLLAIA---LFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYA 62

Query: 64  SQHIGDCQMVHSNGPYGENLAWSSVDLSGTDAVQMWVDEKQFYDYASNSC---VGNECRH 123
           +Q I DC +VHSNGP+GEN+A SS ++S  DA +MW++EKQ+YDY SN+C    G  C H
Sbjct: 63  NQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLH 122

Query: 124 YTQVVWKNSVRVGCAKVRCNNGATLISCNYDPAGNYVNQRPY 163
           YTQVVWKN+VR+GCAKV CN+G T I+CNYDP GNY+ ++P+
Sbjct: 123 YTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Lcy10g005320.1 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-49
Identity = 85/138 (61.59%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 26  AQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVHSNGPYGENLAW 85
           AQD PQD++  HN ARA+VGV P++WD+ VA YA+ Y +Q  GDC M HS+G YGEN+AW
Sbjct: 26  AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 86  SSVDLSGTDAVQMWVDEKQFYDYASNSCV-GNECRHYTQVVWKNSVRVGCAKVRCNNGAT 145
           SS  ++G  AV MWVDE+  YDY SN+C    +C HYTQVVW+NS R+GCAKVRCNNG T
Sbjct: 86  SSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQT 145

Query: 146 LISCNYDPAGNYVNQRPY 163
            I+CNYDP GN+V + PY
Sbjct: 146 FITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Lcy10g005320.1 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-44
Identity = 81/140 (57.86%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 26  AQDLPQDYVDAHNTARAQVGVEPIQWDDSVANYAQQYLSQHIGDCQMVH--SNGPYGENL 85
           AQD PQDY+D HN AR QVGV P++W      YA  Y  Q  GDC + H  SNG YGENL
Sbjct: 27  AQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGDCSLTHSNSNGLYGENL 86

Query: 86  AWSSVDLSGTDAVQMWVDEKQFYDYASNSCV-GNECRHYTQVVWKNSVRVGCAKVRCNNG 145
           AWS   LSG +AV++WV+EK  Y YASN+C  G +C HYTQVVW+ S  VGCAKV+C+NG
Sbjct: 87  AWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGCAKVKCDNG 146

Query: 146 ATLISCNYDPAGNYVNQRPY 163
            T ++CNY P GNY  + PY
Sbjct: 147 GTFVTCNYYPPGNYRGRWPY 166

The following BLAST results are available for this feature:

BLAST of Lcy10g005320.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.4e-52	58.97	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	4.0e-52	66.19	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q9ZNS4	3.4e-51	66.42	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
P07053	8.3e-50	61.15	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09042	2.4e-49	60.51	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of Lcy10g005320.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4Q0	3.6e-72	79.27	Basic form of pathogenesis-related protein 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BZL6	3.6e-72	79.27	basic form of pathogenesis-related protein 1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0K7P0	3.7e-69	77.58	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070254 PE=4 SV...	[more]
A0A6J1GMZ5	5.6e-65	74.84	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145543...	[more]
A0A2N9H5X4	3.2e-60	67.92	SCP domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19954 PE=4...	[more]

BLAST of Lcy10g005320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455066.1	7.5e-72	79.27	PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo] >KAA00313...	[more]
XP_004136924.2	7.7e-69	77.58	pathogenesis-related protein 1 [Cucumis sativus] >KGN43831.1 hypothetical protei...	[more]
XP_022952869.1	1.2e-64	74.84	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023554792.1	3.7e-63	73.58	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554793.1...	[more]
KAB1208616.1	1.6e-58	66.88	Pathogenesis-related protein 1 [Morella rubra]	[more]

BLAST of Lcy10g005320.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14610.1	2.8e-53	66.19	pathogenesis-related gene 1	[more]
AT2G14580.1	2.4e-52	66.42	basic pathogenesis-related protein 1	[more]
AT3G19690.1	1.3e-50	53.70	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	1.9e-49	61.59	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT5G26130.1	4.1e-44	57.86	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 118..134 score: 58.82 coord: 145..158 score: 52.03 coord: 95..108 score: 45.19 coord: 49..67 score: 32.02
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 21..162
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..158 e-value: 5.3E-59 score: 212.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 34..150 e-value: 1.0E-18 score: 68.4
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 22..162 e-value: 3.0E-45 score: 156.1
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 18..162
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 21..162
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 30..162 e-value: 1.52049E-81 score: 235.221
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy10g005320	Lcy10g005320	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005320.1.exon1	Lcy10g005320.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005320.1.utr3p1	Lcy10g005320.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005320.1.cds1	Lcy10g005320.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005320.1.utr5p1	Lcy10g005320.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy10g005320.1	Lcy10g005320.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005615	extracellular space