Lcy10g005010.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy10g005010.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein FAR1-RELATED SEQUENCE 2-like
Location	Chr10: 13458971 .. 13464299 (+)
Sequence length	579
RNA-Seq Expression	Lcy10g005010.1
Synteny	Lcy10g005010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTCGACAGTAAAATAACAGGCAAAATCACAGAATGCGCTAGGAATCCCACAGCTTACAGGGCCGAGACGCAAGCGATTGAAGGGAGAGCATATTGGGATTGGGAAAGGGAAAAAGAAATGAGGGAGAGGTTGATTTGCAGTGTAGATAATGCGGGTGTAGATGAAGAAGGTGTAGAAGGAACCTTTTGGGTTGTGCTGTGTGCGATGTTGTCCTTGTGGCTGTGAGATGTGAGGGTTTTGTTTGGTTTTTAATGGGGAAGTTTTGTTTTGTGGCAGAACGCGGTAAGGACTTTGGGGATTCGAAAAAGGTGAAGTGGTGGAGCCGGGGAGAGAAAGAGGAGGAAGTGAAAAGAGAATGGAGAGAATGGAAATGGAGAAGGGAAAGGGGAATAAATATATTTATATATATTTCATAATTAATGAGTTCTGGAGGATGAGAGAAGAGAACGATGTGGGAGTGGGACCGTTAGAGAAGAGAAAAAGAAGATTAAAATAAAGAAATAAAAATAAAAATAATATAATATTTTTTATTTAATTTGATAATATTTTATTTAAAAATAAATTTTAAAATAAAAATAATAGGACCCCGTTAGATTGAACAACAAAATGGATGGCAGGGACCAAATTGCTCCTTATCTCAAACCTTAGGGACTAAATTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCTATAATTTTTGAATTAATTTCAAAATTTAATTCTTGAGAGAAAATATTTGAAAGAGCTCAAATAAATTTAATATGAGTTGGATTCATATTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATTATTTATTAAAATTAGAGACATTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTAGATTCATATTAATTTTAATTTTAATAAAATCCTTAAGATTAAATATATGATATTTAATTGGGAAATTAATTAATTATAGAATTATTTAATTATTTATTAAAATTAGAGACATTATTGCCAACAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGATTAATTCACAAGCAGTTGGTGAATTTAATCTGAGTCGTCAACAAGAGTAAGTAATTTGTTACTTTATAAATTAGATTTAGATCTAATATTTTTGTATGTTTAGCCTTAATATATATTTAGAACAGTTCTAATATTATTGCCAATATATTAGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCGCGCTTTCACTTTACGGAATTACAGAATTCCAATCCTTCAGATGTAACGAGACAAGACCGAGAAAAAAGACAACATGCTCGGACTAGGGATGGTGTTGAGACGCTGCCCCTAGCGTCTCAATGCCAACGCAATTTTGAAGCAGAATAAAAAGTCCATGGCGTCAAGATGCCGAGCCTGACGTCTCAACGCCGCGACGTTTTCTATAAATATTAGGCTTCATTTTAGTCTGCCATTAGGTTAGAATTTTGGTCTCTTTTCGATTTGTTTCGTCTTCTTTACTTCTCAGCTGTATAAACATTGTTAGGTCATATCTTATACAATTCCTTGTATTTGTTTATGGTTTTACCTTGTTTGTGAGTAGCTAAATGTCTTTTTTATCGTTGGATTGAGATTATGTCTGGATTGTTATTAAACTTGGTTGAGTTTTCTGGTATTTCAATTCTGTTCTTGCTGTATTTTTATTGAGTTTTGCATGTTACCCCGTTTAAGCCAATACATGAGACTAGTTTCTTAGGCTTGACGACCCTAGGAGATTACTACTTGTGTATTCTATCAGTTATTTTTAGATAGCCATTAGGCTGAGGCAAGACAATTTCTACGGAGTGGCGACCCTTGATAGGCCTAGGATGCATGCTAAAGGTGGTATGAATTAGATTTAAATTAAGTTTAAGTTTATTTAATACAATTTCGAACCCACGATCCTAAAACGACTAGTTTAAGTAGGTAATTGCGAGATTGCTTATTCTAGATTAGTTAGATATAACTTAGTGGTCATTGCGAGGTCTTAGATGGTTGCTACTTTATGTATGAGGGGTGACGATCGATAATGATAAAATTGATTAATCTTGTTAATTGCAGAATTCTGGGTTAACGAGTTAATTAAACATAGGTTAGTGTAGGGGGTCCTCTGAGTAACCAAGAAGCTAACCAGACTAATAAAAATTGGCATAAAATAATTTTTAGAGAAAACTCGGAAGCCAAGTGAAATAGCATTCAGGCATAAGAAATCCTAATCCAACGATTCCTTTTTATGATATTGGTTTTTGCTCTATTTTTCCATCGCATGCTTTATTCTGTTCTCTTTACTTTCAACATTTATTTTGTTTGTCCTACTTTTCCAAAAAAAAAAAAACCCTGTTACATAAGCACAAAATTCTGCATTTGCTAGATCCCCTTCCCTGTGTTCGACCCCGACCACTATTTCTACAAAATAGTTTGTGTTGTGGACTATAAATTTATTTGACAACTCGAGTCTCGACAACTCGGACCTTGCCATTAATCAACATTCGTTAACTCTGGGTCACTCCACTAAAGACCCACAACTGCACTTTTCTCACTGTAGAATATTTCTATGTCCACGGATATCGACCAAGACAGTAAGTCAATCCTTGATGAGTGTTCGTAACTCTAGCTGGGTCAAATTATCGTTTTACCCCTGGGTTACCTCTGGGTCCTTAAGTACCACTGATCCCTCTAATGAACAACCTGTTTAGGGTCCAACCACTAAACAGAAATTCCTCTTGGGCCAGGAGAGGACAACACTTTTGTTCAAGCCTCGGAAATTAGTCCTTAAGGGAACACACATCTACTTACCCTAATTGGGGAAAGAGTGGATTCCATCTTGTATTATTATGATCCCAGCCCCCACTCGATCTTGCCCCTGAAATGGTAGGATTATTGAGTCACGAACAGGCCACTCTCTCACCCATACAAATCTAAGGACAATCCCTCCTGAAAAGGAGTTCATAACAGACTTACGATTGAGATTGAGTTACCTAGGTCATCCTATTGAAATAGAAACCTAAACTAGTTAACGGTGTTACATCTAGTGGTTACTATTTCACGGTTCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTTCATGTCTCCTACATGGATGCCTTGGATTAATGCATCTGTATCGAATACACAGTGTGCCGTATCACATAGTGTCACAAGGATAAGGTACCCAACCTTATCCCTATACTATAGACCATTTAGGTTGTTACTTGAACACCGATCCCCGTATGTCCCCACATACTAGTCCAAGTTTTATTTAAACAACCTTGGATCTTAGTTTATTGGACTTAGGGTTTATTAATGCAAACTCGATTATTCAATAACCAAATTACTGAATCACTCAAATATCGCTTTATTGAGAACGATTAATTTGTTTCATTTACTATCTACGAGTTTTAGGGCATAAAACCCATAAAACCCAACACTCACAACATTCTATCCCTTGAGTTCTTTTTTTTTCCCCATTTCTTTTTATTTATAAAAAAGTCAAGAAAAATTTAATGCGTCTTCTATGCCTTAGCAAAGAGATGCAACATCCTGTTGAGCATGGCGACATTAAGAACTTGCACCTCAAATAATTTATATCCCTTCTCTTTGTTTTTTTAGTTGCTTGATTTTTAATTTTTATTTATGTTTGTTTGCTTTCTTTTTGTTTTGTACGAGTCTATGGCCTAAGCCTGTGGAAAAGCATTTTTTTAGGCGTTGTGGATCATTCCCTCCCAACCATTATGTCAAAATTCAGGGGAGGTTTTTTGTTCCCTTTATTTTGTCCCTCTTGTTTTTTATGTTTTAATACATTGGGGGCAATGTAAGATTTAGGTTGGGGGTGGAGTTAGTGCTTTGTATGCTAGGTTATGGTTGAGTCTTGATGCACCTGAGCAATAGACTATTATATTTTGCATGCCATATTTGTTGCTTTGTTTATGATTGAGGCCATGCATCTGAACATTGGACCTATTTTTGAACAATTGTTTTTTTATTTTTTTTTAATTGGAGCTTTCATGTTGAGATTGTTTGTTTGCTTTTGGATTGATGTTGATATTTTAAGGATTAGCATGCATTAATACATATTTTGTTTTTAGGTGAATTCAAGCATGTCTAGCATCTTTAGAGCCTCAATTAAAATTTTGGGAAATTGGACTGAATGGCCAAATCGAGGGTGCAATTTTGAAACATGGCAAAAAAAAAAAAAAACTAGAATATGGCTACACGTGATGTTTGCGTGATTCTTGAATGGCATCCACACTTGCATTATACCCATTTTGCCCTTGTTGTAAGATTTTTGGGATATCATCCATCCGTAAACTGCCCCTAAACAATCGTAACACCCACCCGCAAGAACCCCCTAACAACTATACCTGGTTTACCCACAACAAATTGAATCTCCTCTTCTTCTTCTTCTTTTTTTTTTTAAATAATAAATTCAAACTATATCTCTTCAAGTCCTATACTTGCGTGGAGTGTATAGATCTCCAACAAACAAAATCTCTTTAAGATAAACAAATATTTTTTTTATCAGCTGCAAATTTGAATTAATTGAACTGATCATCAACATTGATCGATGCAATCATCAACATATTCCAGGTACACTGTGTAATCCAAGTTATTCCTTTTGATATTTTCACGTCTGCCACATATGTCTCTATCAAACATTACGGTACTGTTCAATGGAATGTGGGATGAAAACAACCACCACCATGATTTCATGTCTACTAATGTGTCAATCTCGATGGAATGCATAATAGGAATATTTACTGAATGCATTTGAAGCAAGATTTTTTCGTCTGGTAACCAAGTGATCACACGTTTAACCATGTATAGGAATGAGATCAATAAATCAAACATAATCAGGATCACTGATGACAGAGATGTTGTATGGTTCATGTCAAACATCATTGATGGGATGCCTAGTGATATTTGTGTTGTTGTCGACCATTGCGAAACCAATGATTTGGCTTCAAATACAGTGTATTTGCAGCTCAATAACAACAAATCATCCTTGCAGCCAAAAAGTAGTGGAAAAAATTATAAGATTATTGACTACATTGATGTTGATTCGCTGGCATCTTCAATACCACTGAGTGAAGATTCAGTTTTTCAAAGCAAGGACCAGTTGAAGAAAGAAATATACTTACTTGCTTTAAAGATTCGGTTTTCAGCTACGTACCATTAA

mRNA sequence

ATGACAGTCGACAGTAAAATAACAGGCAAAATCACAGAATGCGCTAGGAATCCCACAGCTTACAGGGCCGAGACGCAAGCGATTGAAGGGAGAGCATATTGGGATTGGGAAAGGGAAAAAGAAATGAGGGAGAGGTTGATTTGCAGTGTAGATAATGCGGGTGTAGATGAAGAAGGTGTAGAAGGAACCTTTTGGGTTGTGCTGTGTGCGATGTTGTCCTTGTGGCTGAATGAGATCAATAAATCAAACATAATCAGGATCACTGATGACAGAGATGTTGTATGGTTCATGTCAAACATCATTGATGGGATGCCTAGTGATATTTGTGTTGTTGTCGACCATTGCGAAACCAATGATTTGGCTTCAAATACAGTGTATTTGCAGCTCAATAACAACAAATCATCCTTGCAGCCAAAAAGTAGTGGAAAAAATTATAAGATTATTGACTACATTGATGTTGATTCGCTGGCATCTTCAATACCACTGAGTGAAGATTCAGTTTTTCAAAGCAAGGACCAGTTGAAGAAAGAAATATACTTACTTGCTTTAAAGATTCGGTTTTCAGCTACGTACCATTAA

Coding sequence (CDS)

ATGACAGTCGACAGTAAAATAACAGGCAAAATCACAGAATGCGCTAGGAATCCCACAGCTTACAGGGCCGAGACGCAAGCGATTGAAGGGAGAGCATATTGGGATTGGGAAAGGGAAAAAGAAATGAGGGAGAGGTTGATTTGCAGTGTAGATAATGCGGGTGTAGATGAAGAAGGTGTAGAAGGAACCTTTTGGGTTGTGCTGTGTGCGATGTTGTCCTTGTGGCTGAATGAGATCAATAAATCAAACATAATCAGGATCACTGATGACAGAGATGTTGTATGGTTCATGTCAAACATCATTGATGGGATGCCTAGTGATATTTGTGTTGTTGTCGACCATTGCGAAACCAATGATTTGGCTTCAAATACAGTGTATTTGCAGCTCAATAACAACAAATCATCCTTGCAGCCAAAAAGTAGTGGAAAAAATTATAAGATTATTGACTACATTGATGTTGATTCGCTGGCATCTTCAATACCACTGAGTGAAGATTCAGTTTTTCAAAGCAAGGACCAGTTGAAGAAAGAAATATACTTACTTGCTTTAAAGATTCGGTTTTCAGCTACGTACCATTAA

Protein sequence

MTVDSKITGKITECARNPTAYRAETQAIEGRAYWDWEREKEMRERLICSVDNAGVDEEGVEGTFWVVLCAMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLNNNKSSLQPKSSGKNYKIIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRFSATYH

Homology

[Close]

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL
Match: A0A5A7VGR4 (Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00860 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-04
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 66  VVLCAMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTV 125
           V +C  L+L+  + N S +IRI DD+DV W M  +     +D+ +VVD     D+  NT 
Sbjct: 53  VSICT-LTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLIVVDTAPATDI-GNTP 112

Query: 126 YLQLNNNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLAL 185
           Y+      SS  P++     K  IID    +S  + I +   S+F+ K  LKK IY+LAL
Sbjct: 113 YM------SSKLPRTEDSRTKNVIIDLNAFESPNTVIHIRVGSMFRQKTVLKKAIYMLAL 168

Query: 186 KIRF 188
              F
Sbjct: 173 NSSF 168

[Close]

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL
Match: A0A5D3BUN6 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00540 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-04
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 70  AMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYL-- 129
           + L ++ N  N SN+IRI DD+DV W M            +V+     NDL S T+YL  
Sbjct: 16  SQLIVYWNGCNNSNLIRIVDDKDVSWLM------------LVMSKFSDNDLLSLTLYLLV 75

Query: 130 QLNNN---KSSLQPKSSGKNYK-IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLAL 188
            L N     S L       N + IID    +S  ++IP+   S+F++K  LKK IY+L +
Sbjct: 76  MLQNTPYLSSELSKAQDSSNERGIIDLDAFESAYTAIPIRVGSMFRNKSVLKKAIYMLVV 127

[Close]

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL
Match: A0A5A7SJA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001550 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 71  MLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLN 130
           ML+L+  + N S +IRI DD+DV W M  +     +D+ VV+D     D+  NT Y+   
Sbjct: 17  MLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDI-GNTPYM--- 76

Query: 131 NNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRF 188
              SS  P++     +  IID    +S  + I +   S+F+ K  LKK IY+LAL   F
Sbjct: 77  ---SSELPRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSF 128

[Close]

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL
Match: A0A5D3DFW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00040 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 71  MLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLN 130
           ML+L+  + N S +IRI DD+DV W M  +     +D+ VV+D     D+  NT Y+   
Sbjct: 17  MLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDI-GNTPYM--- 76

Query: 131 NNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRF 188
              SS  P++     +  IID    +S  + I +   S+F+ K  LKK IY+LAL   F
Sbjct: 77  ---SSELPRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSF 128

[Close]

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-04
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 72  LSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLNN 131
           L+L+  + N S +IRI DD+DV W M  +     +D+ VV+D     D+  NT Y+    
Sbjct: 51  LTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDI-GNTPYM---- 110

Query: 132 NKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRF 188
             SS  P++     +  IID    +S  + I +   S+F+ K  LKK IY+LAL   F
Sbjct: 111 --SSELPRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSF 161

[Close]

BLAST of Lcy10g005010.1 vs. NCBI nr
Match: XP_038887125.1 (uncharacterized protein LOC120077310 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-08
Identity = 44/126 (34.92%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 66  VVLCAMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCET-NDLASNT 125
           + +  ++  W+   N SN+I I +D+ ++W M  + D    D+CVVVDH  +    + NT
Sbjct: 53  LTISRLIMYWIGSSN-SNLISIVEDKYILWLMLMLPDSPEIDLCVVVDHVSSVAQNSQNT 112

Query: 126 VYLQLNNNKSSLQPKSSGKNYKIIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALK 185
           +YL   +       K    N +I+D  D D   S IP+     F SK  LKK IY LALK
Sbjct: 113 LYLNNESTNIDQSFKHPAGNNEIVDSQDFDVFQSGIPIRVGLPFSSKSVLKKAIYFLALK 172

Query: 186 IRFSAT 191
             F  T
Sbjct: 173 NSFELT 177

[Close]

BLAST of Lcy10g005010.1 vs. NCBI nr
Match: TYK02522.1 (uncharacterized protein E5676_scaffold784G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-04
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 70  AMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYL-- 129
           + L ++ N  N SN+IRI DD+DV W M            +V+     NDL S T+YL  
Sbjct: 16  SQLIVYWNGCNNSNLIRIVDDKDVSWLM------------LVMSKFSDNDLLSLTLYLLV 75

Query: 130 QLNNN---KSSLQPKSSGKNYK-IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLAL 188
            L N     S L       N + IID    +S  ++IP+   S+F++K  LKK IY+L +
Sbjct: 76  MLQNTPYLSSELSKAQDSSNERGIIDLDAFESAYTAIPIRVGSMFRNKSVLKKAIYMLVV 127

[Close]

BLAST of Lcy10g005010.1 vs. NCBI nr
Match: KAA0067552.1 (protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYJ97202.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-04
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 66  VVLCAMLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTV 125
           V +C  L+L+  + N S +IRI DD+DV W M  +     +D+ +VVD     D+  NT 
Sbjct: 53  VSICT-LTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLIVVDTAPATDI-GNTP 112

Query: 126 YLQLNNNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLAL 185
           Y+      SS  P++     K  IID    +S  + I +   S+F+ K  LKK IY+LAL
Sbjct: 113 YM------SSKLPRTEDSRTKNVIIDLNAFESPNTVIHIRVGSMFRQKTVLKKAIYMLAL 168

Query: 186 KIRF 188
              F
Sbjct: 173 NSSF 168

[Close]

BLAST of Lcy10g005010.1 vs. NCBI nr
Match: TYK22587.1 (uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-04
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 71  MLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLN 130
           ML+L+  + N S +IRI DD+DV W M  +     +D+ VV+D     D+  NT Y+   
Sbjct: 17  MLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDI-GNTPYM--- 76

Query: 131 NNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRF 188
              SS  P++     +  IID    +S  + I +   S+F+ K  LKK IY+LAL   F
Sbjct: 77  ---SSELPRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSF 128

[Close]

BLAST of Lcy10g005010.1 vs. NCBI nr
Match: KAA0025876.1 (uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-04
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 71  MLSLWLNEINKSNIIRITDDRDVVWFMSNIIDGMPSDICVVVDHCETNDLASNTVYLQLN 130
           ML+L+  + N S +IRI DD+DV W M  +     +D+ VV+D     D+  NT Y+   
Sbjct: 17  MLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDI-GNTPYM--- 76

Query: 131 NNKSSLQPKSSGKNYK--IIDYIDVDSLASSIPLSEDSVFQSKDQLKKEIYLLALKIRF 188
              SS  P++     +  IID    +S  + I +   S+F+ K  LKK IY+LAL   F
Sbjct: 77  ---SSELPRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSF 128

The following BLAST results are available for this feature:

BLAST of Lcy10g005010.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy10g005010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGR4	1.3e-04	35.48	Protein FAR1-RELATED SEQUENCE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BUN6	1.3e-04	34.68	DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7SJA0	1.7e-04	35.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DFW1	1.7e-04	35.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C300	6.5e-04	34.75	uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=...	[more]

BLAST of Lcy10g005010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887125.1	1.1e-08	34.92	uncharacterized protein LOC120077310 [Benincasa hispida]	[more]
TYK02522.1	2.7e-04	34.68	uncharacterized protein E5676_scaffold784G00540 [Cucumis melo var. makuwa]	[more]
KAA0067552.1	2.7e-04	35.48	protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa] >TYJ97202.1 prot...	[more]
TYK22587.1	3.5e-04	35.29	uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]	[more]
KAA0025876.1	3.5e-04	35.29	uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy10g005010.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy10g005010	Lcy10g005010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005010.1.exon1	Lcy10g005010.1.exon1	exon
Lcy10g005010.1.exon2	Lcy10g005010.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy10g005010.1.cds1	Lcy10g005010.1.cds1	CDS
Lcy10g005010.1.cds2	Lcy10g005010.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy10g005010.1	Lcy10g005010.1-protein	polypeptide