Lcy08g014600.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy08g014600.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr08: 44709991 .. 44713416 (-)
Sequence length	279
RNA-Seq Expression	Lcy08g014600.1
Synteny	Lcy08g014600.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCTTCAGTGCAGGCTAGAAAGGCTTTCTTCTTGACTGCAAACTTGCTCGTCCTCAACCCAGGTATTTCTGCTCAATCCATTATTTTCATCACATTTGCTTTATCACTGTGGCATGTTGATAAATTTTTCTCACTAAATCCTCAATTTGAAAGAGTGACATAGAGTTAAAATGATCTTGAAAAGGGTCCCTTTGTAGATGTGAGAAGGATCAATTTTTTGAATAGTTGGGGATTAATACTAGTTTATTGAGTTATGCATGTTGCTATCATGATGGTAGGAGTTGTTTGGCAGCCTGTGCTGCAGAATAAATTTTACTGTGATCACTGATCATGTTGCTTGTTATTGTTAAAGTTGTACTTCATGAGCCTGTACTTTTTGGAAGAATATCAGGCTGAAAAATAGGAAATTTGGGCTAATAAAGTGGGACCTAATAAGATAAATAATTTCTTAAAAATTGTTAACCAAATATGTTTTCATTTACTTTTTGTGCTCAAATCAAATAAGAAACAATTTGGCCTATTGATGGTTCATGTTTGTTAGAATGTCTTTATCTTTTTAATTTTAATTTATTCAAAATTAGAATTTGAGACTCTTCATCAAAGAAGTCTAAGTAGGTACCTCATCTTTTAGGAAGAAAACATAAAGAAAGAAAGGTCAGGTAAAGGTAGAAATACAGGGATTTAAATCATGTAAGGTTTGTTTGATAGCATTTTTTCTATTTCTTGCTTTTAGTTTTTATTTTTGAAATTTAAGTACGTGTGGTTTGTGACATATTTTCTCATTTCTTAATTTTTTTTTTTAAATTTCTGTTTTATTTTTTTTAATAGTTCTCAAAATTTTGTTATATTTATTATTTATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTGTAGATGTTATCAAAATTATGTTTATTTGAATTGTCTTCGCTAAAAATGACGAATGAAGAATAAAAATACCTTATTTATTTATTTATTTTGAAGAACTAGCTTTCATTGAGAAAGAATGAAAGAATACAAGGGCATACAAAAAACGAGTCCACAAAAAAGGGGGTCCAATTAAAGGAAGGGACCCCAATCAAGTAAAATCATGCCTAACGAATAATTACAAAAGAGTTTCGACACTGAAACTCAAAGGGAAACATGGAATCTAGCAAGGGACCATGCATCTCTCGTGTCTCTTTCCAACCCCCTAAACACTCTGTTATTTTCTTTTCCCCCACAAAGTACATATCAAGGCACACAACCCAGCTTGTCACAAAAATCTCCCATTCTCACGAAAGGGCGAATGAAGGAGGAACTCCTCAATCATCTCCCTAACATCCATATAATTCCGCGTCTGCACCCCAAAAGCATCATAGAACAAATCCCACACCACACGCACATAGTCACAAGTCCAAAGAATATGATCCAGATCTTCCTCCACCTTCTTGCAAAGAATGCAACAAAACAGGCCCACCAACGAGGGCATCGAGAGCCTATCGAAAGTATTAACTCCATTTAATATCCTATGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGGAAACCGCCTGTGAGATTAGTCGTGGTGGGCGTAAGCTAGCCCAAACACTTACGAATATAAAAAAAAATAGAAGATAACTTGCCAAATAAAGTATTAAATACATTTTGATCTTTTTAGTGTAAACAAGAGAATGAAAAATAAAAATAATAACCAAGCATTTTTTTTTTCATTTTAAATCAAAACTAAATAAATGTTAAATTCAAATTTAATTTGAAGTTGAATGAGCTTTTATTATTATTTTTTTTTAAGAAAACATCTTAGTTGTGTCAATTAGGGTTTTCTTTTTCCCTCTTTTCTTGATTGAACTAATAAGTAATATTTTAGTATATCGTGGAACAAGAGAGTTGATTAATTCGATAAAATAAGGATGAATGAAAAAATATGATTTATTATGCATTATGTTTCCTTGCTCCATCAAATTTTAGTATCATATTGTGTCAAATCATAATTGGTTGGTCCAATCAACATGTGCTACACAATATTTAAGTAATAACATTAAAGGTAGAGATTTATTAGAAACCAAATAAAAAATTAATGGATGCAATAACTCTTTTAAGCTTAGAGACTATGCAGAAAGTCTGGAAAGGTTGGAAACTAAATTTATTATTTAATCTGAAATTTTTTAAAAAAATGAAACGAGAAGAAGAAATAAAAAGACGACTCTAAAATAATTGAATTTTACTCATCGAATCATGGGGAGCGAATGAATGGTAGTCATCTAAAATTCTAAGTGGGACCAAATTGCATGTTCATTTTGGCGAGAAGCAAAGCCCAATCATGGCTCTGCCGACTCTATTTGTTTGTCAAGAATCTATTCATTTTCCAAGTCAAATTTGTATTGGATTATTATTATTAGAAAGAAAATCTAGGATCTTAGATTCCAAAATTAAATACCATTCAAAATATTTTAAGAATTTTAATATTGTAATTCTTCCAAACTCTTCTCTGTTTAGTTTCATATTTGGAAGGAAGATTGAATATTTTACAATCTCTAGTCCACTTACTAATTGAGTGCATGTTTAGGAGTGATTTGGAAATGACTAAAATCACTTTTGTCAAGTTCAAAATCACTATGAAACACACATTTAATTATTCAAAATCAATTTCATGTTTGATTTTACACTCTTAAATGTGATTTTCATATCATCAAAATTGATTCTGAATTATTAAAAGCATGTTTCAGAGTGATTTTGAATATGAAAAAAGTGATTTTAACCATTTAAAAGTTACTCTCAAACATGCACTGTTTTTTTTTTTTTTTTTGTCTGTTTGCTTGTTATTTGACTGATCGTTTGGAAATTATTATTTTCACCCATGGTTCACTTCTTTACCTCTATAGTTGGATAGTGAAACTCTTTATTCAGTAATTTTTTTACTTATAATCTAAGACAAGCTTTTTTTGGTATTAGTGTTCAACTTGGAACAAATGTCTATAGTTGCTAGTGTTCATGGCTACACATATTTCAAGAAGGCAATTGAGTTGGCTGGTTCTTTGGCTTATAGGAGTCCAAGTATTGTCTCTCTTAAAGGTGATATCTTCTAGATTTCTGCAAATCTTTTATTTAGATGATATTTGTAGCATGATTTCTTTTAGGTCTCGTCGATCTTTTAGTAGTTTTTAGTGTAATTTTATACCTATCATTACTAATATTTTTGGATGGGATAACCACTTTGATTTCTAGTAGTCCAGATGTTGTCTCTGCAATTTGTGAATCTTTTATTTTTCGATGACATTTGTAGAATAATTTTTTTCAGGTTCTATTGATCTATGTAGTACTTTACTATATGGATCTTCGCAGATATTTTGAGATGAGATAG

mRNA sequence

ATGGTGCCTTCAGTGCAGGCTAGAAAGGCTTTCTTCTTGACTGCAAACTTGCTCGTCCTCAACCCAGTGTTCAACTTGGAACAAATGTCTATAGTTGCTAGTGTTCATGGCTACACATATTTCAAGAAGGCAATTGAGTTGGCTGGTTCTTTGGCTTATAGGAGTCCAAGTATTGTCTCTCTTAAAGGTCTCGTCGATCTTTTAGTAGTTTTTAGTGTTCTATTGATCTATGTAGTACTTTACTATATGGATCTTCGCAGATATTTTGAGATGAGATAG

Coding sequence (CDS)

ATGGTGCCTTCAGTGCAGGCTAGAAAGGCTTTCTTCTTGACTGCAAACTTGCTCGTCCTCAACCCAGTGTTCAACTTGGAACAAATGTCTATAGTTGCTAGTGTTCATGGCTACACATATTTCAAGAAGGCAATTGAGTTGGCTGGTTCTTTGGCTTATAGGAGTCCAAGTATTGTCTCTCTTAAAGGTCTCGTCGATCTTTTAGTAGTTTTTAGTGTTCTATTGATCTATGTAGTACTTTACTATATGGATCTTCGCAGATATTTTGAGATGAGATAG

Protein sequence

MVPSVQARKAFFLTANLLVLNPVFNLEQMSIVASVHGYTYFKKAIELAGSLAYRSPSIVSLKGLVDLLVVFSVLLIYVVLYYMDLRRYFEMR

Homology

The following BLAST results are available for this feature:

BLAST of Lcy08g014600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g014600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g014600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g014600.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy08g014600	Lcy08g014600	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy08g014600.1.exon4	Lcy08g014600.1.exon4	exon
Lcy08g014600.1.exon3	Lcy08g014600.1.exon3	exon
Lcy08g014600.1.exon2	Lcy08g014600.1.exon2	exon
Lcy08g014600.1.exon1	Lcy08g014600.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy08g014600.1.cds4	Lcy08g014600.1.cds4	CDS
Lcy08g014600.1.cds3	Lcy08g014600.1.cds3	CDS
Lcy08g014600.1.cds2	Lcy08g014600.1.cds2	CDS
Lcy08g014600.1.cds1	Lcy08g014600.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy08g014600.1	Lcy08g014600.1-protein	polypeptide