Lcy08g014550.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy08g014550.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr08: 44679011 .. 44679871 (-)
Sequence length	861
RNA-Seq Expression	Lcy08g014550.1
Synteny	Lcy08g014550.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAACGTAGCCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATGGACGTGATGTTGAAGCTTTGGAACTCTTCCAACAGATGGAAGAACATGGTTTTGAACCAGATGAGGTGACTGTGGTCACGATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGATGTTGGACAAAGGATCCATTCTCATGCAAGCTCCAAAGGAAAGTTGGTAGATATCACGACGGTTGGGAATTCGCTAGTCGATTTTTACTGTAAATGTGGGAAGATCGAAGGGGCTTACAACATTTTTCAGAAAATGACTTGCAAAAGTGTTGTTTCTTGGAATACAATGATCTTGGGCTTTGCTTTAAATGGGCAGGGAGAGCTCGCTATTGACCTTCTCATGGAGATGGGAAGAGAGGACGTGAAGCCTAATGATGCAACATTTGTAGCCGTCTTGACTGCTTGTGTCCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTCAGAAGTACGAAATCCAGCCGAAACTCGAACATTTTGGCTGTATGGTTGATCTTTTGGGACGTGGTGGATGTGTGGAGGAGGCTCATAACTTGATTAAAAGCATGCCAATGCAGCCAAATGCCAATTTATGGGGTGCTTTGCTTGGTGCTTGTCGAACTCATGGTAACTTGAAACTTGCAGAATTAGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTGTTGCTGTCAAATATATTGGCAGAAGAAGGGAAGTGGGAAGATGTTGAGAATGTCAGACATTGGATGAGAGAAATGAGAGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAA

mRNA sequence

ATGACTGAACGTAGCCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATGGACGTGATGTTGAAGCTTTGGAACTCTTCCAACAGATGGAAGAACATGGTTTTGAACCAGATGAGGTGACTGTGGTCACGATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGATGTTGGACAAAGGATCCATTCTCATGCAAGCTCCAAAGGAAAGTTGGTAGATATCACGACGGTTGGGAATTCGCTAGTCGATTTTTACTGTAAATGTGGGAAGATCGAAGGGGCTTACAACATTTTTCAGAAAATGACTTGCAAAAGTGTTGTTTCTTGGAATACAATGATCTTGGGCTTTGCTTTAAATGGGCAGGGAGAGCTCGCTATTGACCTTCTCATGGAGATGGGAAGAGAGGACGTGAAGCCTAATGATGCAACATTTGTAGCCGTCTTGACTGCTTGTGTCCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTCAGAAGTACGAAATCCAGCCGAAACTCGAACATTTTGGCTGTATGGTTGATCTTTTGGGACGTGGTGGATGTGTGGAGGAGGCTCATAACTTGATTAAAAGCATGCCAATGCAGCCAAATGCCAATTTATGGGGTGCTTTGCTTGGTGCTTGTCGAACTCATGGTAACTTGAAACTTGCAGAATTAGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTGTTGCTGTCAAATATATTGGCAGAAGAAGGGAAGTGGGAAGATGTTGAGAATGTCAGACATTGGATGAGAGAAATGAGAGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAA

Coding sequence (CDS)

ATGACTGAACGTAGCCTTGTTTCTTGGAACACTATTATTTCCTGTTTAGCTCAAAATGGACGTGATGTTGAAGCTTTGGAACTCTTCCAACAGATGGAAGAACATGGTTTTGAACCAGATGAGGTGACTGTGGTCACGATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGATGTTGGACAAAGGATCCATTCTCATGCAAGCTCCAAAGGAAAGTTGGTAGATATCACGACGGTTGGGAATTCGCTAGTCGATTTTTACTGTAAATGTGGGAAGATCGAAGGGGCTTACAACATTTTTCAGAAAATGACTTGCAAAAGTGTTGTTTCTTGGAATACAATGATCTTGGGCTTTGCTTTAAATGGGCAGGGAGAGCTCGCTATTGACCTTCTCATGGAGATGGGAAGAGAGGACGTGAAGCCTAATGATGCAACATTTGTAGCCGTCTTGACTGCTTGTGTCCATTCGGGATTGTTAGAGAAGGGTCGAGAGCTATTTTCTTCAATGGCTCAGAAGTACGAAATCCAGCCGAAACTCGAACATTTTGGCTGTATGGTTGATCTTTTGGGACGTGGTGGATGTGTGGAGGAGGCTCATAACTTGATTAAAAGCATGCCAATGCAGCCAAATGCCAATTTATGGGGTGCTTTGCTTGGTGCTTGTCGAACTCATGGTAACTTGAAACTTGCAGAATTAGCAGTGAAAGAGCTCATCAGTCTTGAACCATGGAACTCTGGTAATTATGTGTTGCTGTCAAATATATTGGCAGAAGAAGGGAAGTGGGAAGATGTTGAGAATGTCAGACATTGGATGAGAGAAATGAGAGTCAAGAAAGCACCTGGGCAGAGTGCAAGTGGGTAA

Protein sequence

MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFALNGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISLEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG

Homology

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot
Match: O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.5e-89
Identity = 156/284 (54.93%), Postives = 212/284 (74.65%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERS+VSWN++IS L++ GRD EALELF +M + GF+PDE TVVT+LP+ + LG LD G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           + IHS A S G   D  TVGN+LVDFYCK G +E A  IF+KM  ++VVSWNT+I G A+
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313

Query: 121 NGQGELAIDLLMEMGRE-DVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKL 180
           NG+GE  IDL   M  E  V PN+ATF+ VL  C ++G +E+G ELF  M ++++++ + 
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373

Query: 181 EHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELIS 240
           EH+G MVDL+ R G + EA   +K+MP+  NA +WG+LL ACR+HG++KLAE+A  EL+ 
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433

Query: 241 LEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           +EP NSGNYVLLSN+ AEEG+W+DVE VR  M++ R++K+ GQS
Sbjct: 434 IEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-74
Identity = 136/283 (48.06%), Postives = 190/283 (67.14%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M +R  VSW  +I+  +Q+G   EAL LF QME  G   +  +  + L  C+ + AL++G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           +++H     KG       VGN+L+  YCKCG IE A ++F++M  K +VSWNTMI G++ 
Sbjct: 429 KQLHGRL-VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 488

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           +G GE+A+     M RE +KP+DAT VAVL+AC H+GL++KGR+ F +M Q Y + P  +
Sbjct: 489 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 548

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           H+ CMVDLLGR G +E+AHNL+K+MP +P+A +WG LLGA R HGN +LAE A  ++ ++
Sbjct: 549 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 608

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           EP NSG YVLLSN+ A  G+W DV  +R  MR+  VKK PG S
Sbjct: 609 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.5e-73
Identity = 128/283 (45.23%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M ++++VSW  +IS     G  VEA++ F++M+  G EPDE++++++LP C++LG+L++G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           + IH +A  +G L   T V N+L++ Y KCG I  A  +F +M  K V+SW+TMI G+A 
Sbjct: 261 KWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 320

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           +G    AI+   EM R  VKPN  TF+ +L+AC H G+ ++G   F  M Q Y+I+PK+E
Sbjct: 321 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 380

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           H+GC++D+L R G +E A  + K+MPM+P++ +WG+LL +CRT GNL +A +A+  L+ L
Sbjct: 381 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 440

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           EP + GNYVLL+NI A+ GKWEDV  +R  +R   +KK PG S
Sbjct: 441 EPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-72
Identity = 129/284 (45.42%), Postives = 192/284 (67.61%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M E+ LV+WN++I+  A+NG+  EAL L+ +M   G +PD  T+V++L  C+++GAL +G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           +R+H +    G   ++ +  N L+D Y +CG++E A  +F +M  K+ VSW ++I+G A+
Sbjct: 242 KRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 301

Query: 121 NGQGELAIDLLMEM-GREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKL 180
           NG G+ AI+L   M   E + P + TFV +L AC H G++++G E F  M ++Y+I+P++
Sbjct: 302 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 361

Query: 181 EHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELIS 240
           EHFGCMVDLL R G V++A+  IKSMPMQPN  +W  LLGAC  HG+  LAE A  +++ 
Sbjct: 362 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 421

Query: 241 LEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           LEP +SG+YVLLSN+ A E +W DV+ +R  M    VKK PG S
Sbjct: 422 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.7e-72
Identity = 129/283 (45.58%), Postives = 180/283 (63.60%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M ++SLVSWN +I    +N   VEA+EL+ +ME  GFEPD V++ ++LP C    AL +G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           ++IH +   K KL+    + N+L+D Y KCG +E A ++F+ M  + VVSW  MI  +  
Sbjct: 329 KKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 388

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           +G+G  A+ L  ++    + P+   FV  L AC H+GLLE+GR  F  M   Y+I P+LE
Sbjct: 389 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 448

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           H  CMVDLLGR G V+EA+  I+ M M+PN  +WGALLGACR H +  +  LA  +L  L
Sbjct: 449 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQL 508

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
            P  SG YVLLSNI A+ G+WE+V N+R+ M+   +KK PG S
Sbjct: 509 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL
Match: A0A5A7U1F2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001240 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149
Identity = 257/286 (89.86%), Postives = 270/286 (94.41%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERSLVSWNTIISCLAQN RDVEALELFQQMEEHGF+PDEVTVVTMLPVCSRLGAL+VG
Sbjct: 199 MSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIHS+ SSKG LV  T VGNSL+DFYCKCG IE AYNIFQKMTCKSVVSWNT+ILGFAL
Sbjct: 259 QRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GE AIDL MEM +EDVKPNDATFVAVLTACVHSGLLEKGRELFSSMA+ YEIQPKLE
Sbjct: 319 NGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAE+AVKELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WE+VENVR WMRE  VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL
Match: A0A1S3BXN7 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN=LOC103494345 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149
Identity = 257/286 (89.86%), Postives = 270/286 (94.41%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERSLVSWNTIISCLAQN RDVEALELFQQMEEHGF+PDEVTVVTMLPVCSRLGAL+VG
Sbjct: 199 MSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIHS+ SSKG LV  T VGNSL+DFYCKCG IE AYNIFQKMTCKSVVSWNT+ILGFAL
Sbjct: 259 QRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GE AIDL MEM +EDVKPNDATFVAVLTACVHSGLLEKGRELFSSMA+ YEIQPKLE
Sbjct: 319 NGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAE+AVKELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WE+VENVR WMRE  VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL
Match: A0A0A0LJW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.2e-148
Identity = 256/286 (89.51%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERSLVSWNTIISCLAQN RDVEALELFQQMEEHGF+PDEVTVVTMLPVCSRLGAL+VG
Sbjct: 199 MSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIHS+ASSKG LV ITTVGNSL+DFYCKCG IE AYNIFQKMTCKSVVSWNT+ILGFAL
Sbjct: 259 QRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GE AIDL MEM +E +KPNDATFVAVLTACVHSGLLEKGRELFSSMA+ YEIQPKLE
Sbjct: 319 NGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAH LIKSMPMQPNA LWGA+LGACRTHGNLKLAE+AVKELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WE+VENVR WMRE  VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL
Match: A0A6J1DUP9 (pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=3673 GN=LOC111023267 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.0e-141
Identity = 247/286 (86.36%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M++RS+VSWNTIISCLAQ+GRDVEALELFQQMEE GF PDEVTVVT+LPVCSRLGA  VG
Sbjct: 199 MSDRSIVSWNTIISCLAQSGRDVEALELFQQMEEQGFAPDEVTVVTILPVCSRLGAPVVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIH++ASSKG LVDIT VGNSL+DFYCKCG  EGAYNIF KMTCKSVVSWNTMILGFAL
Sbjct: 259 QRIHAYASSKGNLVDITFVGNSLLDFYCKCGNTEGAYNIFNKMTCKSVVSWNTMILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GELA DL MEMGR+DVKPNDATFVA+LTACVHSGLLEKGRE+FSSM  KY+I PKLE
Sbjct: 319 NGKGELATDLFMEMGRKDVKPNDATFVALLTACVHSGLLEKGREIFSSMMHKYKIVPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGR G VEEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAELAVKELISL
Sbjct: 379 HFGCMVDLLGRSGLVEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAELAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LA EG+WEDVENVR WMR   V KAPGQSA+G
Sbjct: 439 EPWNSGNYVLLSNMLAAEGRWEDVENVRGWMRGKSVTKAPGQSANG 484

[Close]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL
Match: A0A6J1FGY4 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3662 GN=LOC111443903 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.5e-139
Identity = 243/286 (84.97%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M +RSLVSWNT ISCLAQ+GRDVEALELFQQ+EEHGFEPDEVTVVTMLPVCSRLGALDVG
Sbjct: 199 MNDRSLVSWNTTISCLAQSGRDVEALELFQQIEEHGFEPDEVTVVTMLPVCSRLGALDVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           Q IHS+A+SK  L++ T VGNSL+DFYCK G  E AYNIFQKMTCK+VVSWNTMILGFAL
Sbjct: 259 QMIHSYATSKADLMNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKNVVSWNTMILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GELAIDL MEMGR DVKPNDAT VA+LTACVHSGLLEKGRE+FSSMA+KYEI+PKLE
Sbjct: 319 NGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKGREVFSSMAEKYEIEPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAH+LI+SMPMQPNA LWGALLGACRTHGNLKLAE+A  ELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAANELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EP NSGNYVLLSNILAEEG+W+DVENVR  MR   VKKAPG+SASG
Sbjct: 439 EPSNSGNYVLLSNILAEEGRWKDVENVRCSMRGKNVKKAPGRSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. NCBI nr
Match: XP_008453700.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] >KAA0048057.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96479.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148
Identity = 257/286 (89.86%), Postives = 270/286 (94.41%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERSLVSWNTIISCLAQN RDVEALELFQQMEEHGF+PDEVTVVTMLPVCSRLGAL+VG
Sbjct: 199 MSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIHS+ SSKG LV  T VGNSL+DFYCKCG IE AYNIFQKMTCKSVVSWNT+ILGFAL
Sbjct: 259 QRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GE AIDL MEM +EDVKPNDATFVAVLTACVHSGLLEKGRELFSSMA+ YEIQPKLE
Sbjct: 319 NGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAE+AVKELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WE+VENVR WMRE  VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. NCBI nr
Match: XP_004144815.1 (pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 8.6e-148
Identity = 256/286 (89.51%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERSLVSWNTIISCLAQN RDVEALELFQQMEEHGF+PDEVTVVTMLPVCSRLGAL+VG
Sbjct: 199 MSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIHS+ASSKG LV ITTVGNSL+DFYCKCG IE AYNIFQKMTCKSVVSWNT+ILGFAL
Sbjct: 259 QRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GE AIDL MEM +E +KPNDATFVAVLTACVHSGLLEKGRELFSSMA+ YEIQPKLE
Sbjct: 319 NGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAH LIKSMPMQPNA LWGA+LGACRTHGNLKLAE+AVKELISL
Sbjct: 379 HFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WE+VENVR WMRE  VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. NCBI nr
Match: XP_038890516.1 (pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida])

HSP 1 Score: 525.8 bits (1353), Expect = 2.4e-145
Identity = 250/286 (87.41%), Postives = 267/286 (93.36%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M ERSL+SWNT++SCLAQ+  D EALELFQQMEE GF+PDEVTVVTMLPVCSRLGALDVG
Sbjct: 199 MNERSLISWNTMLSCLAQSRCDAEALELFQQMEECGFKPDEVTVVTMLPVCSRLGALDVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIH++ASSKG +VD TT+GNSLVDFYCKCG +E AYNIFQKMTCKSVVSWNTMILGFAL
Sbjct: 259 QRIHNYASSKGDMVDNTTIGNSLVDFYCKCGNVERAYNIFQKMTCKSVVSWNTMILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG GE AIDL M+MG+EDVKPNDATFVAVLTACVHSGLLEKGRELFSSMA KYEIQPKLE
Sbjct: 319 NGNGEFAIDLFMKMGKEDVKPNDATFVAVLTACVHSGLLEKGRELFSSMADKYEIQPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGC+EEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAE+AVKEL SL
Sbjct: 379 HFGCMVDLLGRGGCLEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELSSL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LAEEG+WEDVENVR WM+   VKKAPGQSASG
Sbjct: 439 EPWNSGNYVLLSNMLAEEGRWEDVENVRRWMKGKSVKKAPGQSASG 484

[Close]

BLAST of Lcy08g014550.1 vs. NCBI nr
Match: XP_022156351.1 (pentatricopeptide repeat-containing protein At1g09190 [Momordica charantia])

HSP 1 Score: 512.7 bits (1319), Expect = 2.1e-141
Identity = 247/286 (86.36%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M++RS+VSWNTIISCLAQ+GRDVEALELFQQMEE GF PDEVTVVT+LPVCSRLGA  VG
Sbjct: 199 MSDRSIVSWNTIISCLAQSGRDVEALELFQQMEEQGFAPDEVTVVTILPVCSRLGAPVVG 258

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           QRIH++ASSKG LVDIT VGNSL+DFYCKCG  EGAYNIF KMTCKSVVSWNTMILGFAL
Sbjct: 259 QRIHAYASSKGNLVDITFVGNSLLDFYCKCGNTEGAYNIFNKMTCKSVVSWNTMILGFAL 318

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GELA DL MEMGR+DVKPNDATFVA+LTACVHSGLLEKGRE+FSSM  KY+I PKLE
Sbjct: 319 NGKGELATDLFMEMGRKDVKPNDATFVALLTACVHSGLLEKGREIFSSMMHKYKIVPKLE 378

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGR G VEEAHNLIKSMPMQPNA LWGALLGACRTHGNLKLAELAVKELISL
Sbjct: 379 HFGCMVDLLGRSGLVEEAHNLIKSMPMQPNATLWGALLGACRTHGNLKLAELAVKELISL 438

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EPWNSGNYVLLSN+LA EG+WEDVENVR WMR   V KAPGQSA+G
Sbjct: 439 EPWNSGNYVLLSNMLAAEGRWEDVENVRGWMRGKSVTKAPGQSANG 484

[Close]

BLAST of Lcy08g014550.1 vs. NCBI nr
Match: KAG6586227.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507.3 bits (1305), Expect = 8.7e-140
Identity = 246/286 (86.01%), Postives = 262/286 (91.61%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M +RSLVSWNT ISCLAQ+GRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG
Sbjct: 102 MNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 161

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           Q IHS+A+SK  LV+ T VGNSL+DFYCK G  E AYNIFQKMTCKSVVSWNTMILGFAL
Sbjct: 162 QMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFAL 221

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           NG+GELAIDL MEM R DVKPNDAT VA+LTACVHSGLLEKGRE+FSSMA+KYEI+PKLE
Sbjct: 222 NGKGELAIDLFMEMVRGDVKPNDATLVAILTACVHSGLLEKGREVFSSMAEKYEIEPKLE 281

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           HFGCMVDLLGRGGCVEEAH+LI+SMPMQPNA LWGALLGACRTHGNLKLAE+A  ELISL
Sbjct: 282 HFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAANELISL 341

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQSASG 287
           EP NSGNYVLLSNILAEEG+WEDVENVR  MR   VKKAPG+SASG
Sbjct: 342 EPSNSGNYVLLSNILAEEGRWEDVENVRRSMRGKNVKKAPGRSASG 387

[Close]

BLAST of Lcy08g014550.1 vs. TAIR 10
Match: AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 1.0e-90
Identity = 156/284 (54.93%), Postives = 212/284 (74.65%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M+ERS+VSWN++IS L++ GRD EALELF +M + GF+PDE TVVT+LP+ + LG LD G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           + IHS A S G   D  TVGN+LVDFYCK G +E A  IF+KM  ++VVSWNT+I G A+
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313

Query: 121 NGQGELAIDLLMEMGRE-DVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKL 180
           NG+GE  IDL   M  E  V PN+ATF+ VL  C ++G +E+G ELF  M ++++++ + 
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373

Query: 181 EHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELIS 240
           EH+G MVDL+ R G + EA   +K+MP+  NA +WG+LL ACR+HG++KLAE+A  EL+ 
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433

Query: 241 LEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           +EP NSGNYVLLSN+ AEEG+W+DVE VR  M++ R++K+ GQS
Sbjct: 434 IEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477

[Close]

BLAST of Lcy08g014550.1 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 7.2e-76
Identity = 136/283 (48.06%), Postives = 190/283 (67.14%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M +R  VSW  +I+  +Q+G   EAL LF QME  G   +  +  + L  C+ + AL++G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           +++H     KG       VGN+L+  YCKCG IE A ++F++M  K +VSWNTMI G++ 
Sbjct: 429 KQLHGRL-VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 488

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           +G GE+A+     M RE +KP+DAT VAVL+AC H+GL++KGR+ F +M Q Y + P  +
Sbjct: 489 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 548

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           H+ CMVDLLGR G +E+AHNL+K+MP +P+A +WG LLGA R HGN +LAE A  ++ ++
Sbjct: 549 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 608

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           EP NSG YVLLSN+ A  G+W DV  +R  MR+  VKK PG S
Sbjct: 609 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650

[Close]

BLAST of Lcy08g014550.1 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 276.9 bits (707), Expect = 1.8e-74
Identity = 128/283 (45.23%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M ++++VSW  +IS     G  VEA++ F++M+  G EPDE++++++LP C++LG+L++G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           + IH +A  +G L   T V N+L++ Y KCG I  A  +F +M  K V+SW+TMI G+A 
Sbjct: 261 KWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 320

Query: 121 NGQGELAIDLLMEMGREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKLE 180
           +G    AI+   EM R  VKPN  TF+ +L+AC H G+ ++G   F  M Q Y+I+PK+E
Sbjct: 321 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 380

Query: 181 HFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELISL 240
           H+GC++D+L R G +E A  + K+MPM+P++ +WG+LL +CRT GNL +A +A+  L+ L
Sbjct: 381 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 440

Query: 241 EPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           EP + GNYVLL+NI A+ GKWEDV  +R  +R   +KK PG S
Sbjct: 441 EPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482

[Close]

BLAST of Lcy08g014550.1 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73
Identity = 129/284 (45.42%), Postives = 192/284 (67.61%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M E+ LV+WN++I+  A+NG+  EAL L+ +M   G +PD  T+V++L  C+++GAL +G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           +R+H +    G   ++ +  N L+D Y +CG++E A  +F +M  K+ VSW ++I+G A+
Sbjct: 242 KRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 301

Query: 121 NGQGELAIDLLMEM-GREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKL 180
           NG G+ AI+L   M   E + P + TFV +L AC H G++++G E F  M ++Y+I+P++
Sbjct: 302 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 361

Query: 181 EHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELIS 240
           EHFGCMVDLL R G V++A+  IKSMPMQPN  +W  LLGAC  HG+  LAE A  +++ 
Sbjct: 362 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 421

Query: 241 LEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           LEP +SG+YVLLSN+ A E +W DV+ +R  M    VKK PG S
Sbjct: 422 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464

[Close]

BLAST of Lcy08g014550.1 vs. TAIR 10
Match: AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73
Identity = 129/284 (45.42%), Postives = 192/284 (67.61%), Query Frame = 0


Query: 1   MTERSLVSWNTIISCLAQNGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG 60
           M E+ LV+WN++I+  A+NG+  EAL L+ +M   G +PD  T+V++L  C+++GAL +G
Sbjct: 49  MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108

Query: 61  QRIHSHASSKGKLVDITTVGNSLVDFYCKCGKIEGAYNIFQKMTCKSVVSWNTMILGFAL 120
           +R+H +    G   ++ +  N L+D Y +CG++E A  +F +M  K+ VSW ++I+G A+
Sbjct: 109 KRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 168

Query: 121 NGQGELAIDLLMEM-GREDVKPNDATFVAVLTACVHSGLLEKGRELFSSMAQKYEIQPKL 180
           NG G+ AI+L   M   E + P + TFV +L AC H G++++G E F  M ++Y+I+P++
Sbjct: 169 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 228

Query: 181 EHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNANLWGALLGACRTHGNLKLAELAVKELIS 240
           EHFGCMVDLL R G V++A+  IKSMPMQPN  +W  LLGAC  HG+  LAE A  +++ 
Sbjct: 229 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 288

Query: 241 LEPWNSGNYVLLSNILAEEGKWEDVENVRHWMREMRVKKAPGQS 284
           LEP +SG+YVLLSN+ A E +W DV+ +R  M    VKK PG S
Sbjct: 289 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331

The following BLAST results are available for this feature:

BLAST of Lcy08g014550.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80488	1.5e-89	54.93	Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	1.0e-74	48.06	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	2.5e-73	45.23	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	2.1e-72	45.42	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
P0C899	4.7e-72	45.58	Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th...	[more]

BLAST of Lcy08g014550.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U1F2	4.9e-149	89.86	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BXN7	4.9e-149	89.86	pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LJW6	4.2e-148	89.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1	[more]
A0A6J1DUP9	1.0e-141	86.36	pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=...	[more]
A0A6J1FGY4	3.5e-139	84.97	pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3...	[more]

BLAST of Lcy08g014550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453700.1	1.0e-148	89.86	PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] ...	[more]
XP_004144815.1	8.6e-148	89.51	pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativu...	[more]
XP_038890516.1	2.4e-145	87.41	pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida]	[more]
XP_022156351.1	2.1e-141	86.36	pentatricopeptide repeat-containing protein At1g09190 [Momordica charantia]	[more]
KAG6586227.1	8.7e-140	86.01	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Lcy08g014550.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09190.1	1.0e-90	54.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	7.2e-76	48.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	1.8e-74	45.23	mitochondrial editing factor 21	[more]
AT4G21065.1	1.5e-73	45.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.2	1.5e-73	45.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 182..206 e-value: 0.071 score: 13.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 106..154 e-value: 7.6E-12 score: 45.3 coord: 6..51 e-value: 4.9E-11 score: 42.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 81..107 e-value: 4.1E-4 score: 18.3 coord: 7..41 e-value: 5.0E-11 score: 40.1 coord: 109..142 e-value: 8.1E-6 score: 23.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 107..141 score: 10.511944
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 5..39 score: 13.054966
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 81..285 e-value: 6.2E-39 score: 136.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..80 e-value: 8.2E-16 score: 60.3
None	No IPR available	PANTHER	PTHR47928:SF148	OS11G0673000 PROTEIN	coord: 1..284
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..284
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..15 score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy08g014550	Lcy08g014550	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy08g014550.1.exon1	Lcy08g014550.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy08g014550.1.cds1	Lcy08g014550.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy08g014550.1	Lcy08g014550.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding