Lcy07g009940.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy07g009940.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Rhodanese domain-containing protein
Location	Chr07: 38859323 .. 38860622 (-)
Sequence length	771
RNA-Seq Expression	Lcy07g009940.1
Synteny	Lcy07g009940.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTTCTTAAAGAATGGATCGAACCTTACAAAAAAGCTCTTTGCTGTTTCAAAGATGGAGGCTGAAAAGAGGTTAATATCATCAGCAATGTTGCCATTTCCTTTGACTCATAAGATAGAACCTCACATTTTATGGGCAAAAAAGAGTTTGAAATTAACTCTGTATATTCATTGTCAATCTGCAGGCCAGAAGATGTTGTGACAGTTGATGTTCAAGTTGCCAAAGATCTCTTACAAAAGGGTCATCTTTATTTGGATGTCAGGTCAGATCATTTTGTCTTTGATTACCTTTTGTCAAAGAAAAAAGAAAGCAATGAAGCTATAAATATAATTGGAAGATATGGTTTTTGTTTGCAGGACAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCAGTGAATGTTCCTTACATGTTCTTCACCCCAGAAGGTAACGATACAAACATGTTTGATTTGTCCTACAAATGAGCTATGCAGTCAATGGCTTGATCTTGCTGCATTATTTTTCCTTCCTTTTACATGTCTTTCTTTTTCTCCTTCACATCTAATGGTTTGCTAACGAATAGGTCGAGTAAAGAATCCCGACTTTCTAGCGCAAGTTACGTTCATATTGAAGAAGGAAGATCATCTAGTTGTGGTAAGAAGAAAAACTGTACCTTGCCACTTTGCGTCTCAATGCAGTTTTAAGGAGTAAAATCGAAACAAATAGCATAATCTGTCCATCTTTTACAGGCCTGCAACAGTGGTGGTAGAGCACTTCGAGCTTGTGTCGATCTGCTTAATTCGGTAAGATTCGAGACTCATAGATCTAATTTGCAAGGTTATCTAGAACTGCAAAAGAAAAGGATCAGTAATGAGATTTATTGGGAAATTTCAGGGCTTCGAGCATGTGAATAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGATAAACCACCTGAAGAGCTCAAAACATTTTGCAAGTTCCGAGGTTGAGATGCTTCTTTGAGAACAGACTCCAAACTTGTCTTCGTTCATGTTATCGTTTACTAAAACGAGATAAAAAAAATTCCATATTTCCCGAAGTTGAGCATTTCAAAGAGTGCAATATGTTTGTATTTTGTCTGTGTTTCTCCACAGATATTGGAGATTCTAATTCCTGCATTTCTGAAGGTTTCATTGTCTGTGCAAAAGAAAGAAAGTTCCAATGTTCCTATTTCTTCTTCCTCCAGCTCCAGCATAATTGTAAACCTTTATCACAGCGCTCAAATATGAGTGCTTAAACTGCAATCGACAAAGATTTA

mRNA sequence

TTGGTTCTTAAAGAATGGATCGAACCTTACAAAAAAGCTCTTTGCTGTTTCAAAGATGGAGGCTGAAAAGAGGCCAGAAGATGTTGTGACAGTTGATGTTCAAGTTGCCAAAGATCTCTTACAAAAGGGTCATCTTTATTTGGATGTCAGGACAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCAGTGAATGTTCCTTACATGTTCTTCACCCCAGAAGGTCGAGTAAAGAATCCCGACTTTCTAGCGCAAGTTACGTTCATATTGAAGAAGGAAGATCATCTAGTTGTGGCCTGCAACAGTGGTGGTAGAGCACTTCGAGCTTGTGTCGATCTGCTTAATTCGGGCTTCGAGCATGTGAATAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGATAAACCACCTGAAGAGCTCAAAACATTTTGCAAGTTCCGAGGTTGAGATGCTTCTTTGAGAACAGACTCCAAACTTGTCTTCGTTCATGTTATCGTTTACTAAAACGAGATAAAAAAAATTCCATATTTCCCGAAGTTGAGCATTTCAAAGAGTGCAATATGTTTGTATTTTGTCTGTGTTTCTCCACAGATATTGGAGATTCTAATTCCTGCATTTCTGAAGGTTTCATTGTCTGTGCAAAAGAAAGAAAGTTCCAATGTTCCTATTTCTTCTTCCTCCAGCTCCAGCATAATTGTAAACCTTTATCACAGCGCTCAAATATGAGTGCTTAAACTGCAATCGACAAAGATTTA

Coding sequence (CDS)

ATGGAGGCTGAAAAGAGGCCAGAAGATGTTGTGACAGTTGATGTTCAAGTTGCCAAAGATCTCTTACAAAAGGGTCATCTTTATTTGGATGTCAGGACAGTTGAAGAGTATAACAAGAGCCATGTTGAGAATGCAGTGAATGTTCCTTACATGTTCTTCACCCCAGAAGGTCGAGTAAAGAATCCCGACTTTCTAGCGCAAGTTACGTTCATATTGAAGAAGGAAGATCATCTAGTTGTGGCCTGCAACAGTGGTGGTAGAGCACTTCGAGCTTGTGTCGATCTGCTTAATTCGGGCTTCGAGCATGTGAATAATATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGATAAACCACCTGAAGAGCTCAAAACATTTTGCAAGTTCCGAGGTTGA

Protein sequence

MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPPEELKTFCKFRG

Homology

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot
Match: Q8RUD6 (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.4e-50
Identity = 92/130 (70.77%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 5   KRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDF 64
           K  EDV TVDV  AK  L  GH YLDVRT EE+ KSHVE A+N+PYMF T EGRV NPDF
Sbjct: 36  KTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDF 95

Query: 65  LAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPP 124
           L+QV  + KK++HL+VACN+GGR  RACVDLLN G++HV NMGGGYSAWVD+GFAGDKPP
Sbjct: 96  LSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPP 155

Query: 125 EELKTFCKFR 135
           E+LK  CKFR
Sbjct: 156 EDLKIACKFR 165

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot
Match: Q9FKW8 (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENA--VNVPYMFFTPEGR 60
           + +  + E+VV+VDV  AK LLQ GH YLDVRT +E+ + H E A  VN+PYM  TP+GR
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGR 64

Query: 61  VKNPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGF 120
           VKN +FL QV+ +L   D ++V C SG R+L+A  +L+ +G++ V N+GGGY AWVD  F
Sbjct: 65  VKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSF 124

Query: 121 AGDKPPEE 127
             +   EE
Sbjct: 125 PINTEEEE 132

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot
Match: F4IPI4 (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 10  VVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHV--ENAVNVPYMFFTPEGRVKNPDFLAQ 69
           V+T+DV  A+ LL  G+ +LDVRTVEE+ K HV  EN  NVPY  +TP+G+  NP+FL  
Sbjct: 32  VITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKH 91

Query: 70  VTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPPEEL 129
           V+ +  + DHL++ C SG R+L A   L++SGF+ V NM GGY AWV+  F      +EL
Sbjct: 92  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 151

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot
Match: Q39129 (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 12  TVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDFLAQVTFI 71
           +V V VA DLL  GH YLDVRT EE+++ H   A+NVPYM     G  KNPDFL QV+  
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 72  LKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSG 118
             + D+++V C SGGR+++A  DLL++GF  V ++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot
Match: Q38853 (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.0e-22
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 2   EAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKN 61
           EA K P    +V V+VA++L Q G+ YLDVRT +E++  H   A+NVPYM+    G VKN
Sbjct: 65  EAVKIP---TSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYMYRVGSGMVKN 124

Query: 62  PDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDS 117
           P FL QV+   +K D +++ C SG  +  A  DLL +GF  + ++ GGY AW ++
Sbjct: 125 PSFLRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTEN 176

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL
Match: A0A6J1JC15 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111483675 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.7e-63
Identity = 118/135 (87.41%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME+EKRPEDVVTVDVQVAKDLLQKG LYLDVRTVEEYNK HVENA+NVPYMF TPEGRVK
Sbjct: 1   MESEKRPEDVVTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVT ILKKEDH+VVACNSGGR  RAC+DL N+G+EHV NMGGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKP EELK  CKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL
Match: A0A6J1CZ38 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111015512 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.8e-62
Identity = 114/135 (84.44%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME EKR EDVVT+DV+ A+D+LQKG+LYLDVR+VEEYNKSHVENA+NVPYMF TP+GRVK
Sbjct: 1   MEVEKRSEDVVTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQV+ +LKKEDHLVVACNSGGRALRACVDLLN+GFEHV NMGGGYSAWVDSGF+G
Sbjct: 61  NPDFLAQVSSVLKKEDHLVVACNSGGRALRACVDLLNAGFEHVRNMGGGYSAWVDSGFSG 120

Query: 121 DKPPEELKTFCKFRG 136
           +KPPEELK  CKFRG
Sbjct: 121 NKPPEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL
Match: A0A6J1FXK5 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448561 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.1e-61
Identity = 115/135 (85.19%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME+EKRPEDVVTVDV+VAKDLLQKG LYLDVRTVEEYNK+HVENA+NVPYMF T EGRVK
Sbjct: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVT ILKKEDH+VVACNSGGR  RAC+DL N+G+EHV NM GGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKP EELK  CKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL
Match: A0A5D3BKL1 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001240 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.3e-61
Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 12  TVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDFLAQVTFI 71
           TVDVQVAKDLL+KGHLYLDVRTVEEYNK HVENA+NVPYMF TPEGRVKNPDFLAQVT I
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQVTSI 63

Query: 72  LKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPPEELKTFC 131
           LKKEDH+VVACNSGGR LRACVDLLN+GFEHVNNMGGGYSAWVDSGFAG+KPPEELK  C
Sbjct: 64  LKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123

Query: 132 KFRG 136
           KFRG
Sbjct: 124 KFRG 127

[Close]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL
Match: A0A1S3C5M3 (rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.3e-61
Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 12  TVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDFLAQVTFI 71
           TVDVQVAKDLL+KGHLYLDVRTVEEYNK HVENA+NVPYMF TPEGRVKNPDFLAQVT I
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQVTSI 63

Query: 72  LKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPPEELKTFC 131
           LKKEDH+VVACNSGGR LRACVDLLN+GFEHVNNMGGGYSAWVDSGFAG+KPPEELK  C
Sbjct: 64  LKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123

Query: 132 KFRG 136
           KFRG
Sbjct: 124 KFRG 127

[Close]

BLAST of Lcy07g009940.1 vs. NCBI nr
Match: XP_038901855.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 9.3e-68
Identity = 127/135 (94.07%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           MEAEKRPEDVVTVDV+VAKDLLQKGHLYLDVRTVEEYNK HVENA+NVPYMFFTPEGRVK
Sbjct: 1   MEAEKRPEDVVTVDVRVAKDLLQKGHLYLDVRTVEEYNKGHVENALNVPYMFFTPEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQV  ILKKEDHLVVACNSGGR LRACVDLLN GFEHVNNMGGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVMSILKKEDHLVVACNSGGRGLRACVDLLNVGFEHVNNMGGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKPPEELKT CKFRG
Sbjct: 121 DKPPEELKTACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. NCBI nr
Match: XP_022985695.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 118/135 (87.41%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME+EKRPEDVVTVDVQVAKDLLQKG LYLDVRTVEEYNK HVENA+NVPYMF TPEGRVK
Sbjct: 1   MESEKRPEDVVTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVT ILKKEDH+VVACNSGGR  RAC+DL N+G+EHV NMGGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKP EELK  CKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. NCBI nr
Match: XP_022146257.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 114/135 (84.44%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME EKR EDVVT+DV+ A+D+LQKG+LYLDVR+VEEYNKSHVENA+NVPYMF TP+GRVK
Sbjct: 1   MEVEKRSEDVVTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQV+ +LKKEDHLVVACNSGGRALRACVDLLN+GFEHV NMGGGYSAWVDSGF+G
Sbjct: 61  NPDFLAQVSSVLKKEDHLVVACNSGGRALRACVDLLNAGFEHVRNMGGGYSAWVDSGFSG 120

Query: 121 DKPPEELKTFCKFRG 136
           +KPPEELK  CKFRG
Sbjct: 121 NKPPEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. NCBI nr
Match: XP_023512925.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME EKRPEDVVTVDV+VAKDLLQKG LYLDVRTVEEYNK+HVENA+NVPYMF T EGRVK
Sbjct: 1   MEGEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQV  ILKKEDH+VVACNSGGR LRACVDLLN+G+EHV NM GGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVASILKKEDHVVVACNSGGRGLRACVDLLNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKP EELK  CKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. NCBI nr
Match: XP_022943998.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 8.4e-61
Identity = 115/135 (85.19%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVK 60
           ME+EKRPEDVVTVDV+VAKDLLQKG LYLDVRTVEEYNK+HVENA+NVPYMF T EGRVK
Sbjct: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVT ILKKEDH+VVACNSGGR  RAC+DL N+G+EHV NM GGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPPEELKTFCKFRG 136
           DKP EELK  CKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of Lcy07g009940.1 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 1.7e-51
Identity = 92/130 (70.77%), Postives = 105/130 (80.77%), Query Frame = 0


Query: 5   KRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDF 64
           K  EDV TVDV  AK  L  GH YLDVRT EE+ KSHVE A+N+PYMF T EGRV NPDF
Sbjct: 36  KTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDF 95

Query: 65  LAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPP 124
           L+QV  + KK++HL+VACN+GGR  RACVDLLN G++HV NMGGGYSAWVD+GFAGDKPP
Sbjct: 96  LSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPP 155

Query: 125 EELKTFCKFR 135
           E+LK  CKFR
Sbjct: 156 EDLKIACKFR 165

[Close]

BLAST of Lcy07g009940.1 vs. TAIR 10
Match: AT5G66170.3 (sulfurtransferase 18 )

HSP 1 Score: 130.6 bits (327), Expect = 9.7e-31
Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENA--VNVPYMFFTPEGR 60
           + +  + E+VV+VDV  AK LLQ GH YLDVRT +E+ + H E A  VN+PYM  TP+GR
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGR 64

Query: 61  VKNPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGF 120
           VKN +FL QV+ +L   D ++V C SG R+L+A  +L+ +G++ V N+GGGY AWVD  F
Sbjct: 65  VKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSF 124

Query: 121 AGDKPPEE 127
             +   EE
Sbjct: 125 PINTEEEE 132

[Close]

BLAST of Lcy07g009940.1 vs. TAIR 10
Match: AT5G66170.2 (sulfurtransferase 18 )

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-29
Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 1   MEAEKRPEDVVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENA--VNVPYMFFTPEGR 60
           + +  + E+VV+VDV  AK LLQ GH YLDVRT +E+ + H E A  VN+PYM  TP+GR
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGR 64

Query: 61  VKNPDFLAQVTFILKKEDHLVVACNSGGRALRACVDLLN--SGFEHVNNMGGGYSAWVDS 120
           VKN +FL QV+ +L   D ++V C SG R+L+A  +L+   SG++ V N+GGGY AWVD 
Sbjct: 65  VKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDH 124

Query: 121 GFAGDKPPEE 127
            F  +   EE
Sbjct: 125 SFPINTEEEE 134

[Close]

BLAST of Lcy07g009940.1 vs. TAIR 10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 7.7e-28
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 10  VVTVDVQVAKDLLQKGHLYLDVRTVEEYNKSHV--ENAVNVPYMFFTPEGRVKNPDFLAQ 69
           V+T+DV  A+ LL  G+ +LDVRTVEE+ K HV  EN  NVPY  +TP+G+  NP+FL  
Sbjct: 32  VITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKH 91

Query: 70  VTFILKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSGFAGDKPPEEL 129
           V+ +  + DHL++ C SG R+L A   L++SGF+ V NM GGY AWV+  F      +EL
Sbjct: 92  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 151

[Close]

BLAST of Lcy07g009940.1 vs. TAIR 10
Match: AT5G66040.1 (sulfurtransferase protein 16 )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 12  TVDVQVAKDLLQKGHLYLDVRTVEEYNKSHVENAVNVPYMFFTPEGRVKNPDFLAQVTFI 71
           +V V VA DLL  GH YLDVRT EE+++ H   A+NVPYM     G  KNPDFL QV+  
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 72  LKKEDHLVVACNSGGRALRACVDLLNSGFEHVNNMGGGYSAWVDSG 118
             + D+++V C SGGR+++A  DLL++GF  V ++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

The following BLAST results are available for this feature:

BLAST of Lcy07g009940.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RUD6	2.4e-50	70.77	Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FKW8	1.4e-29	49.22	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S...	[more]
F4IPI4	1.1e-26	48.76	Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q39129	1.7e-24	50.94	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38853	8.0e-22	43.48	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Lcy07g009940.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JC15	5.7e-63	87.41	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CZ38	4.8e-62	84.44	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1FXK5	4.1e-61	85.19	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3BKL1	5.3e-61	91.13	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5M3	5.3e-61	91.13	rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis...	[more]

BLAST of Lcy07g009940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901855.1	9.3e-68	94.07	protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida]	[more]
XP_022985695.1	1.2e-62	87.41	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima]	[more]
XP_022146257.1	1.0e-61	84.44	protein HIGH ARSENIC CONTENT 1, mitochondrial [Momordica charantia]	[more]
XP_023512925.1	1.0e-61	86.67	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022943998.1	8.4e-61	85.19	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita moschata]	[more]

BLAST of Lcy07g009940.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21045.1	1.7e-51	70.77	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66170.3	9.7e-31	49.22	sulfurtransferase 18	[more]
AT5G66170.2	1.4e-29	49.23	sulfurtransferase 18	[more]
AT2G17850.1	7.7e-28	48.76	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66040.1	1.2e-25	50.94	sulfurtransferase protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 13..119 e-value: 6.9E-15 score: 65.5
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 18..114 e-value: 1.3E-15 score: 57.8
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 22..122 score: 17.608404
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 2..119 e-value: 2.0E-33 score: 116.9
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 9..118
IPR044684	Rhodanese-like domain-containing protein STR17/STR18/HARC1-like	PANTHER	PTHR44542	THIOSULFATE SULFURTRANSFERASE 18	coord: 6..133
None	No IPR available	PANTHER	PTHR44542:SF14	PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED	coord: 6..133
None	No IPR available	CDD	cd00158	RHOD	coord: 16..114 e-value: 4.07971E-23 score: 84.2734

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy07g009940	Lcy07g009940	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy07g009940.1.exon6	Lcy07g009940.1.exon6	exon
Lcy07g009940.1.exon5	Lcy07g009940.1.exon5	exon
Lcy07g009940.1.exon4	Lcy07g009940.1.exon4	exon
Lcy07g009940.1.exon3	Lcy07g009940.1.exon3	exon
Lcy07g009940.1.exon2	Lcy07g009940.1.exon2	exon
Lcy07g009940.1.exon1	Lcy07g009940.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy07g009940.1.utr3p1	Lcy07g009940.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy07g009940.1.cds6	Lcy07g009940.1.cds6	CDS
Lcy07g009940.1.cds5	Lcy07g009940.1.cds5	CDS
Lcy07g009940.1.cds4	Lcy07g009940.1.cds4	CDS
Lcy07g009940.1.cds3	Lcy07g009940.1.cds3	CDS
Lcy07g009940.1.cds2	Lcy07g009940.1.cds2	CDS
Lcy07g009940.1.cds1	Lcy07g009940.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy07g009940.1.utr5p1	Lcy07g009940.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy07g009940.1	Lcy07g009940.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity