Lcy06g022990.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g022990.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	josephin-like protein
Location	Chr06: 47741986 .. 47743728 (+)
Sequence length	1743
RNA-Seq Expression	Lcy06g022990.1
Synteny	Lcy06g022990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAACACAATGACGTACACAGTATAATTAAAGGTCTTGAACAGATGAAGAGACATGGGAAGGGAGTCAACAGGCAGATGAAGAATTCAATTCATGCCCTCTTTAGCTTTATTTCCCAGTCAAAAGGGCAAAAATCTCAGAGCATGCAGATTTTTCAAGACAAATTCTTCTGCCAGAGGACAGTAAAAGAAGAAAAGAAAAAGTGAATGGAAAAAAGTTTTATTTGCTCATTCAAAATCAAATAGAAAACACAGCCTGTGACCTCAAGCAACAGAAAGAAAGAGGCCCATTAACCATGCCGATGGATTTCTGTGATTCTACTGGAAATGGGAATCAAGATGGCCAACAAAAGAGAAACTTGTAGGGCCCTTCCATTGTGCCTCAAAAGCAACGATGATGCTGAAGAGTATCAAGTGGTTGTCTCTCTCTTGCTTCCCTTTTCTTCTCTCCCTCTTCTACTTCTTCTTCTCCTTCTTATTCTTCTTCTTTTTATTCTCTGTTGACTCCACTCATCTCTTTTTCTGACCTAATCCACTTCCTATTCCTTAATCTTAGCCAAAACCCCTCATGGATTAGACGTATAAAAACCTAATCTTTCTCAAGCCCTTCAATTGCAAACCAAGAATAAGAGAGTTGTGGGCATATTCTTCAAGTTCTCTTTTATGGGGTCCAAAGTTCTTTAAAGGGTTGGTAAAAGTTCCTGTTGCTTCATTCAGATGGTGCCCATATATAAATGAACTGTCCATTTGAGCGTAAGCTAAACGCTTAGTTTGATCCACACAGCTGACTGAATCAAGCTTCTTCAATCTTCCCACTGTGGAGAGTCTCTTAATTAAGTCCCCATTCTTTCGTTTTCATTCTTCTTTCTCTTTCCTTCAGTTTGAATCAATAAATGCTCCTTATTCCCACAACCTAACTCACTGTCTCTTCTCATCAAGAAAGCTACTTACTTCTCCCCACATCCCTTCTCATATTTTTACACATTTCACTTCACAAAATCTCTCTCGTTCTCTAAAGCCCATATTTGTTTACCCTTTGGATTTACATCTCAGTTGGAAGGTTCAAATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACAGTCGTGCTCAAACACGGTGGCGGCGACGGCGGCGCCGGAATATGGAGCTTCGGTCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTCCTTCAGAGTCTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACAAGAAAATCTTCACGGAAGGTTTCTTCAGCCTCTACTTTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATAGAATTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGAAAGTTCTGTACTTGTGGGAATGGAATGCATGTAAAATTTAGTCAATATTTTAGACATTCTTTTGCGTGCCCGTCTCTGTAAGATGATGCTTTAGCAGATGATAATAGAGTTTCAGCCTTCGAAGCTCGAGAATTTTCTCTCATTCTAAACGCCATGATCACGAGCAGATATCTGTTCATTAAAAAATTACATAAAATGGATATCTACAAAATATCACTTGATCAGGTAAAAAAAATGTACGTAAGAGTTTATTTGACTGAGTTTATGTTTGTTCAGTGATGTCCATAAAAGAAGGAACTGGATGGAAC

mRNA sequence

CAACAACACAATGACGTACACAGTATAATTAAAGGTCTTGAACAGATGAAGAGACATGGGAAGGGAGTCAACAGGCAGATGAAGAATTCAATTCATGCCCTCTTTAGCTTTATTTCCCAGTCAAAAGGGCAAAAATCTCAGAGCATGCAGATTTTTCAAGACAAATTCTTCTGCCAGAGGACAGTAAAAGAAGAAAAGAAAAAGTGAATGGAAAAAAGTTTTATTTGCTCATTCAAAATCAAATAGAAAACACAGCCTGTGACCTCAAGCAACAGAAAGAAAGAGGCCCATTAACCATGCCGATGGATTTCTGTGATTCTACTGGAAATGGGAATCAAGATGGCCAACAAAAGAGAAACTTGTAGGGCCCTTCCATTGTGCCTCAAAAGCAACGATGATGCTGAAGAGTATCAAGTGGTTGTCTCTCTCTTGCTTCCCTTTTCTTCTCTCCCTCTTCTACTTCTTCTTCTCCTTCTTATTCTTCTTCTTTTTATTCTCTGTTGACTCCACTCATCTCTTTTTCTGACCTAATCCACTTCCTATTCCTTAATCTTAGCCAAAACCCCTCATGGATTAGACGTATAAAAACCTAATCTTTCTCAAGCCCTTCAATTGCAAACCAAGAATAAGAGAGTTGTGGGCATATTCTTCAAGTTCTCTTTTATGGGGTCCAAAGTTCTTTAAAGGGTTGGTAAAAGTTCCTGTTGCTTCATTCAGATGGTGCCCATATATAAATGAACTGTCCATTTGAGCGTAAGCTAAACGCTTAGTTTGATCCACACAGCTGACTGAATCAAGCTTCTTCAATCTTCCCACTGTGGAGAGTCTCTTAATTAAGTCCCCATTCTTTCGTTTTCATTCTTCTTTCTCTTTCCTTCAGTTTGAATCAATAAATGCTCCTTATTCCCACAACCTAACTCACTGTCTCTTCTCATCAAGAAAGCTACTTACTTCTCCCCACATCCCTTCTCATATTTTTACACATTTCACTTCACAAAATCTCTCTCGTTCTCTAAAGCCCATATTTGTTTACCCTTTGGATTTACATCTCAGTTGGAAGGTTCAAATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACAGTCGTGCTCAAACACGGTGGCGGCGACGGCGGCGCCGGAATATGGAGCTTCGGTCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTCCTTCAGAGTCTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACAAGAAAATCTTCACGGAAGGTTTCTTCAGCCTCTACTTTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATAGAATTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGAAAGTTCTGTACTTGTGGGAATGGAATGCATGTAAAATTTAGTCAATATTTTAGACATTCTTTTGCGTGCCCGTCTCTGTAAGATGATGCTTTAGCAGATGATAATAGAGTTTCAGCCTTCGAAGCTCGAGAATTTTCTCTCATTCTAAACGCCATGATCACGAGCAGATATCTGTTCATTAAAAAATTACATAAAATGGATATCTACAAAATATCACTTGATCAGGTAAAAAAAATGTACGTAAGAGTTTATTTGACTGAGTTTATGTTTGTTCAGTGATGTCCATAAAAGAAGGAACTGGATGGAAC

Coding sequence (CDS)

ATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACAGTCGTGCTCAAACACGGTGGCGGCGACGGCGGCGCCGGAATATGGAGCTTCGGTCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTCCTTCAGAGTCTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACAAGAAAATCTTCACGGAAGGTTTCTTCAGCCTCTACTTTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATAGAATTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA

Protein sequence

MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGSTY

Homology

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-04
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 39  LSRDTRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSD-------SMD 98
           L R T     R ++ L  +    +R V  RK  +K S       S  +S        + +
Sbjct: 270 LPRKTECTAARLIKDLSCKFVMGLRLVVMRKKKKKRSPPLKKASSSGISQPSVISVVNDN 329

Query: 99  SHRAEAIEDCIEFLNHSSSLSRSNSVSGS 121
           +HR+ AIEDCI+F+N SSS +RSNS  GS
Sbjct: 330 NHRSAAIEDCIQFINSSSSFTRSNSTCGS 358

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL
Match: A0A5D3DNT5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00960 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHG-GGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVS 60
           MSRKASKRVSFSPDVNDKPTVVLKHG GGDGGAG+WSFGLSR+TRYLPVRFLQSLKARVS
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARVS 60

Query: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120
           EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG
Sbjct: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120

Query: 121 STY 123
           STY
Sbjct: 121 STY 123

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL
Match: A0A1S3B5Q5 (josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHG-GGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVS 60
           MSRKASKRVSFSPDVNDKPTVVLKHG GGDGGAG+WSFGLSR+TRYLPVRFLQSLKARVS
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARVS 60

Query: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120
           EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG
Sbjct: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120

Query: 121 STY 123
           STY
Sbjct: 121 STY 123

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL
Match: A0A0A0LFD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.4e-54
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKH-GGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVS 60
           MSRKASKRVSFSPDVNDKPTVVLKH GGGDGGAG+WSFGLSR+TRYLPVRFLQSLK RVS
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMWSFGLSRETRYLPVRFLQSLKNRVS 60

Query: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120
           EAIRFVSTRKSSRKVSSASTFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSRSNSVSG
Sbjct: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRSNSVSG 120

Query: 121 STY 123
           STY
Sbjct: 121 STY 123

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL
Match: A0A6J1CVV1 (josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.3e-52
Identity = 115/124 (92.74%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGD--GGAGIWSFGLSRDTRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G D  GGAG+WSFGLSR+TRYLPVRFLQSLKARV
Sbjct: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSTY 123
           GS+Y
Sbjct: 121 GSSY 124

[Close]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL
Match: A0A6J1I1K7 (uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.9e-50
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSE 60
           M+RK+SKRVSFSPDVND PTVVLKHGGGD GAGI SFGLSRDTR+LPV FLQS KARVSE
Sbjct: 1   MTRKSSKRVSFSPDVNDNPTVVLKHGGGDDGAGILSFGLSRDTRHLPVGFLQSFKARVSE 60

Query: 61  AIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGS 120
           AIRFVSTRKSSRKVSSA+TFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSR NSVSGS
Sbjct: 61  AIRFVSTRKSSRKVSSAATFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRLNSVSGS 120

Query: 121 TY 123
           TY
Sbjct: 121 TY 122

[Close]

BLAST of Lcy06g022990.1 vs. NCBI nr
Match: XP_038903233.1 (josephin-like protein [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 6.7e-57
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSE 60
           MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSE
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSE 60

Query: 61  AIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGS 120
           AIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGS
Sbjct: 61  AIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGS 120

Query: 121 TY 123
           TY
Sbjct: 121 TY 122

[Close]

BLAST of Lcy06g022990.1 vs. NCBI nr
Match: XP_008442460.1 (PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like protein [Cucumis melo var. makuwa] >TYK24979.1 josephin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHG-GGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVS 60
           MSRKASKRVSFSPDVNDKPTVVLKHG GGDGGAG+WSFGLSR+TRYLPVRFLQSLKARVS
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARVS 60

Query: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120
           EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG
Sbjct: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120

Query: 121 STY 123
           STY
Sbjct: 121 STY 123

[Close]

BLAST of Lcy06g022990.1 vs. NCBI nr
Match: XP_004137733.1 (josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001490 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53
Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKH-GGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVS 60
           MSRKASKRVSFSPDVNDKPTVVLKH GGGDGGAG+WSFGLSR+TRYLPVRFLQSLK RVS
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMWSFGLSRETRYLPVRFLQSLKNRVS 60

Query: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSG 120
           EAIRFVSTRKSSRKVSSASTFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSRSNSVSG
Sbjct: 61  EAIRFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRSNSVSG 120

Query: 121 STY 123
           STY
Sbjct: 121 STY 123

[Close]

BLAST of Lcy06g022990.1 vs. NCBI nr
Match: KAG6580487.1 (hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSE 60
           MSRKASKRVSFSPDVNDKPTV+LKHGG DGGAGIWSF LSRDTRYLPVRFLQSLKA+VSE
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVLLKHGGRDGGAGIWSFSLSRDTRYLPVRFLQSLKAKVSE 60

Query: 61  AIRFVSTRKSSRKVSSA--STFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           AIRFVSTRKSSRKVSSA  STFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  AIRFVSTRKSSRKVSSASTSTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSTY 123
           GSTY
Sbjct: 121 GSTY 124

[Close]

BLAST of Lcy06g022990.1 vs. NCBI nr
Match: XP_022145644.1 (josephin-like protein [Momordica charantia])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 115/124 (92.74%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGD--GGAGIWSFGLSRDTRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G D  GGAG+WSFGLSR+TRYLPVRFLQSLKARV
Sbjct: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSTY 123
           GS+Y
Sbjct: 121 GSSY 124

[Close]

BLAST of Lcy06g022990.1 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-16
Identity = 60/132 (45.45%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MSRKASKRVSFSPDVNDKPTVVL------KHGGGDGGAGIWSFGLSRDTRYLPVRFLQSL 60
           MSR+ASKRV FSPD      ++       +HG      GI+SF  S D+     R L+S+
Sbjct: 1   MSRRASKRVRFSPDPEANDELIFPTHSSSRHGRRRVVVGIFSFSFS-DSPATTKRLLRSI 60

Query: 61  KARVSEAIRFVS--------TRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLN 119
             RV +  R++S        T  SS  VSS+    +S+S++ S +SHRAEAIEDCIEFLN
Sbjct: 61  GDRVGKTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLNGS-ESHRAEAIEDCIEFLN 120

[Close]

BLAST of Lcy06g022990.1 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 63/147 (42.86%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MSRKASKRVSF--SPDVNDKPTVVLKHGGGDGG---------AGIWSFGLSRDTRYLPV- 60
           MSR+A KRVSF  +P+  D+P +  KH G              GI SFGL    R  P  
Sbjct: 1   MSRRACKRVSFNPNPEATDEP-IFPKHDGLSSSHHSRRRVVLVGILSFGL----RSSPAA 60

Query: 61  -RFLQSLKARVSEAIRFVSTRK----------------SSRKVSSASTFTRSRSVSDSMD 119
            + +Q + AR ++ +RF+S R+                SS   SSA    RS+SV+++ +
Sbjct: 61  RKLIQRIGARFAKTLRFISFRRNTTDRRKTSSFLLPSSSSSSSSSAIYMKRSKSVNET-E 120

[Close]

BLAST of Lcy06g022990.1 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08
Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 14  DVNDKPTVVL-KHGGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSEAIRFVSTRKSSR 73
           D + K T +   +G   G        L R T     + ++ L  + ++ +R V  RK  R
Sbjct: 19  DASAKQTAIKGPYGKSPGCTTSCGLRLPRKTEVTAAKLIKHLGCKFAKGLRLVVMRKKKR 78

Query: 74  ----KVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 119
               KVSS S  ++   +  + DSHR+EAIEDCI+F+N SSS +RSNS S
Sbjct: 79  SPPSKVSSFSGRSQPPIIPINNDSHRSEAIEDCIQFINSSSSFTRSNSTS 128

[Close]

BLAST of Lcy06g022990.1 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 39  LSRDTRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSD-------SMD 98
           L R T     R ++ L  +    +R V  RK  +K S       S  +S        + +
Sbjct: 270 LPRKTECTAARLIKDLSCKFVMGLRLVVMRKKKKKRSPPLKKASSSGISQPSVISVVNDN 329

Query: 99  SHRAEAIEDCIEFLNHSSSLSRSNSVSGS 121
           +HR+ AIEDCI+F+N SSS +RSNS  GS
Sbjct: 330 NHRSAAIEDCIQFINSSSSFTRSNSTCGS 358

The following BLAST results are available for this feature:

BLAST of Lcy06g022990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82391	4.0e-04	35.96	Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1	[more]

BLAST of Lcy06g022990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNT5	5.2e-55	97.56	Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35...	[more]
A0A1S3B5Q5	5.2e-55	97.56	josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1	[more]
A0A0A0LFD2	7.4e-54	95.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1	[more]
A0A6J1CVV1	5.3e-52	92.74	josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1	[more]
A0A6J1I1K7	2.9e-50	90.98	uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059...	[more]

BLAST of Lcy06g022990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903233.1	6.7e-57	100.00	josephin-like protein [Benincasa hispida]	[more]
XP_008442460.1	1.1e-54	97.56	PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like prot...	[more]
XP_004137733.1	1.5e-53	95.93	josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001...	[more]
KAG6580487.1	4.5e-53	95.16	hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022145644.1	1.1e-51	92.74	josephin-like protein [Momordica charantia]	[more]

BLAST of Lcy06g022990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01225.1	6.1e-16	45.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G09032.1	2.8e-13	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G07300.1	6.1e-08	36.36	josephin protein-related	[more]
AT2G29640.1	2.8e-05	35.96	JOSEPHIN-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR34355	JOSEPHIN-LIKE PROTEIN	coord: 1..121
None	No IPR available	PANTHER	PTHR34355:SF1	JOSEPHIN-LIKE PROTEIN	coord: 1..121

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g022990	Lcy06g022990	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g022990.1.utr5p1	Lcy06g022990.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g022990.1.exon1	Lcy06g022990.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g022990.1.cds1	Lcy06g022990.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g022990.1.utr3p1	Lcy06g022990.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g022990.1	Lcy06g022990.1-protein	polypeptide