Lcy06g019840.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g019840.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein of unknown function, DUF584
Location	Chr06: 44552799 .. 44554047 (-)
Sequence length	1249
RNA-Seq Expression	Lcy06g019840.1
Synteny	Lcy06g019840.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATCTTATATAAAGACTTTTGACATTTGTAAATAGAGTACGTCAGAGAAGCACAACGAGGACGCCGACGGCCCGCCACCGCCACCGCCACCGCCACGTCAGTCTGGCCCCACGACGGTGACGAACTTTCGGTGCAAATTTCCATTTCCCGATTCCCAATTTTCACTTTCCCCAATTTCCCCTTTTCTTTTAATTCTCCATTTCACCGTCGGTCCGCCGCATCCCCTTTTTTCACTGTACACACAAATCACAAATGGATTCTTCCCCCGCCGCCGCCGGCTATCTTCTCCGGCACTCCTCTTCTTCCAGCCACCACTTCCTCGACCTCTTCTCTTCCCCGCCGCCGCCGCCCTCCGCCGTCGTCTCTGGCTCCGATGAGTTCCACGAATCCGAAGTCTTCTGGACCGCCGATCTTGCCGTATCCAATAACCGTCCCTTCCGCTCCAGAAATATCTCTTCCGACGATCGCGCCTCGAGTTTCGTCCCTCCGAACTCCGGTATCCTCGCTGCCTTGTCCGATGACGCCGATTTTGATCGCAAAGAGAGAACCGGCACGATTCTCACTCGAGAGAGTTCGATGGCGATGGCTATATCCTCCTCCTCCTCCTCGTCGCGATCGATTCCGAGGCCGATACAGACTAGTAGAGATTATTCTCAATCTACGCCTTTTAGGAAATTTCAGCAATCGGCTCCGATCAACGTGCCGATGAGGAAACAGAGGAACAATGGCGAGATTTTCGCGGCAGAGGATGAGGATGATCAGGAGGAGGAGATGTTGCCGCCGCACGAGATTGTGTCGAGAGGCTCCGGCGTGTCGCCGAACACGACGTTTTCGGTGCTGGAAGGCGTCGGAAGGACTCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGTTTTCTGGATTGAAATCGATCGCTTCTGTTAGAGTTTGGTTTTGGTTTTGATTCTGATTTTGATTTTGATTTCGATTTCCGTTGATGTTGTTTCCACTGTCCAATTTTTTTTTTTGGAGGGATGAAAGTGGAAGGCGTTCTGGGTTTTGTTCTGTGTTCCATCATCAGTTCTTCTTCTTCTTCCAGGATTTAGTTGTGAAGAATCAATGGGATGAAGTTGAACTATGAAATTTTCTCAGGTTTTGAGTTCTTGGTTGGGGAATGGGGACTGTAAATTTTGATCCTTTTGAACTTCAAAAAGGTTTAATTTTAATTTTTAAGTATACAATCTTAT

mRNA sequence

AACAAATCTTATATAAAGACTTTTGACATTTGTAAATAGAGTACGTCAGAGAAGCACAACGAGGACGCCGACGGCCCGCCACCGCCACCGCCACCGCCACGTCAGTCTGGCCCCACGACGGTGACGAACTTTCGGTGCAAATTTCCATTTCCCGATTCCCAATTTTCACTTTCCCCAATTTCCCCTTTTCTTTTAATTCTCCATTTCACCGTCGGTCCGCCGCATCCCCTTTTTTCACTGTACACACAAATCACAAATGGATTCTTCCCCCGCCGCCGCCGGCTATCTTCTCCGGCACTCCTCTTCTTCCAGCCACCACTTCCTCGACCTCTTCTCTTCCCCGCCGCCGCCGCCCTCCGCCGTCGTCTCTGGCTCCGATGAGTTCCACGAATCCGAAGTCTTCTGGACCGCCGATCTTGCCGTATCCAATAACCGTCCCTTCCGCTCCAGAAATATCTCTTCCGACGATCGCGCCTCGAGTTTCGTCCCTCCGAACTCCGGTATCCTCGCTGCCTTGTCCGATGACGCCGATTTTGATCGCAAAGAGAGAACCGGCACGATTCTCACTCGAGAGAGTTCGATGGCGATGGCTATATCCTCCTCCTCCTCCTCGTCGCGATCGATTCCGAGGCCGATACAGACTAGTAGAGATTATTCTCAATCTACGCCTTTTAGGAAATTTCAGCAATCGGCTCCGATCAACGTGCCGATGAGGAAACAGAGGAACAATGGCGAGATTTTCGCGGCAGAGGATGAGGATGATCAGGAGGAGGAGATGTTGCCGCCGCACGAGATTGTGTCGAGAGGCTCCGGCGTGTCGCCGAACACGACGTTTTCGGTGCTGGAAGGCGTCGGAAGGACTCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGTTTTCTGGATTGAAATCGATCGCTTCTGTTAGAGTTTGGTTTTGGTTTTGATTCTGATTTTGATTTTGATTTCGATTTCCGTTGATGTTGTTTCCACTGTCCAATTTTTTTTTTTGGAGGGATGAAAGTGGAAGGCGTTCTGGGTTTTGTTCTGTGTTCCATCATCAGTTCTTCTTCTTCTTCCAGGATTTAGTTGTGAAGAATCAATGGGATGAAGTTGAACTATGAAATTTTCTCAGGTTTTGAGTTCTTGGTTGGGGAATGGGGACTGTAAATTTTGATCCTTTTGAACTTCAAAAAGGTTTAATTTTAATTTTTAAGTATACAATCTTAT

Coding sequence (CDS)

ATGGATTCTTCCCCCGCCGCCGCCGGCTATCTTCTCCGGCACTCCTCTTCTTCCAGCCACCACTTCCTCGACCTCTTCTCTTCCCCGCCGCCGCCGCCCTCCGCCGTCGTCTCTGGCTCCGATGAGTTCCACGAATCCGAAGTCTTCTGGACCGCCGATCTTGCCGTATCCAATAACCGTCCCTTCCGCTCCAGAAATATCTCTTCCGACGATCGCGCCTCGAGTTTCGTCCCTCCGAACTCCGGTATCCTCGCTGCCTTGTCCGATGACGCCGATTTTGATCGCAAAGAGAGAACCGGCACGATTCTCACTCGAGAGAGTTCGATGGCGATGGCTATATCCTCCTCCTCCTCCTCGTCGCGATCGATTCCGAGGCCGATACAGACTAGTAGAGATTATTCTCAATCTACGCCTTTTAGGAAATTTCAGCAATCGGCTCCGATCAACGTGCCGATGAGGAAACAGAGGAACAATGGCGAGATTTTCGCGGCAGAGGATGAGGATGATCAGGAGGAGGAGATGTTGCCGCCGCACGAGATTGTGTCGAGAGGCTCCGGCGTGTCGCCGAACACGACGTTTTCGGTGCTGGAAGGCGTCGGAAGGACTCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGTTTTCTGGATTGA

Protein sequence

MDSSPAAAGYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNNRPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSSSRSIPRPIQTSRDYSQSTPFRKFQQSAPINVPMRKQRNNGEIFAAEDEDDQEEEMLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD

Homology

[Close]

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL
Match: A0A6J1L041 (uncharacterized protein LOC111498642 OS=Cucurbita maxima OX=3661 GN=LOC111498642 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.0e-85
Identity = 174/226 (76.99%), Postives = 198/226 (87.61%), Query Frame = 0


Query: 1   MDSSPAAA-GYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNN 60
           MDSSPAAA  + LRHSSS SHH+LDLFSSPPP   +VV+ SDEF+ESEVFWT+D A SNN
Sbjct: 1   MDSSPAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSVVASSDEFNESEVFWTSDFAQSNN 60

Query: 61  RPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
           RPFR+R IS++DR SSF PPNSGILAALSDDADF+ K+R GTI+TRE++MAMAI  SSSS
Sbjct: 61  RPFRTRKISTEDRTSSFDPPNSGILAALSDDADFNSKQRIGTIVTRETTMAMAI--SSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
           SR IP+PIQ+S++YSQS P RKFQQSAPINVP  MRKQRNN EI AAE+E+D  EEMLPP
Sbjct: 121 SRWIPKPIQSSKEYSQSMPSRKFQQSAPINVPKAMRKQRNNDEIRAAEEEED--EEMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV+RG GV PNTTFS+LEGVGRTLKGRDLR+VRNAVWHRTGF+D
Sbjct: 181 HEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 222

[Close]

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL
Match: A0A6J1FXK6 (uncharacterized protein LOC111448027 OS=Cucurbita moschata OX=3662 GN=LOC111448027 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.3e-83
Identity = 172/230 (74.78%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 1   MDSSPAAA-----GYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLA 60
           MDSSPAAA      + LRHSSS SHH+LDLFSSPPP   + V+ SDEF+ESEVFWT+D A
Sbjct: 49  MDSSPAAASAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFA 108

Query: 61  VSNNRPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISS 120
            SNNRPFR+R IS++DR SSF  PNSGILAALSDDADF+ K+R GTI+TRE+SMAMAI  
Sbjct: 109 QSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAI-- 168

Query: 121 SSSSSRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEE 180
           SSSSSRSIP+PIQ+SR+YSQS P RKFQQSAPINVP  MRKQR N EI AA  E++++EE
Sbjct: 169 SSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAA-EEEEDEE 228

Query: 181 MLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           MLPPHEIV+RG GV PNTTFS+LEGVGRTLKGRDLR+VRNAVWHRTGF+D
Sbjct: 229 MLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 275

[Close]

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL
Match: A0A5A7TLX9 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001930 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 159/226 (70.35%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MDSSPAAAGYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNNR 60
           MD   A A  LLRHSS SSHHFL   SSPP      VS SDEF+ESE+FWTAD   S+N 
Sbjct: 1   MDLYTATAASLLRHSSPSSHHFLHFSSSPPSQTPPAVSPSDEFNESELFWTADFVSSSNN 60

Query: 61  PFRSRNISSDDRASSFV-PPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
             RSR ISSDDRASSF+ PPNSGILAALSDD+ ++RK+R GTILTR++S+     S SSS
Sbjct: 61  SSRSRRISSDDRASSFIPPPNSGILAALSDDSSYNRKKRIGTILTRDTSIT---KSPSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
            RSIPRP+Q++RDYSQS P RKFQQSAPI VP  MRK RNNGE    E E+++EE+MLPP
Sbjct: 121 MRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRNNGE--HVEREEEEEEQMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV RGSG+SPNTTFSVLEG GRTLKGRDLRRVRNAVWHRTGF+D
Sbjct: 181 HEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 221

[Close]

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL
Match: A0A1S3B6S2 (uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 159/226 (70.35%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MDSSPAAAGYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNNR 60
           MD   A A  LLRHSS SSHHFL   SSPP      VS SDEF+ESE+FWTAD   S+N 
Sbjct: 1   MDLYTATAASLLRHSSPSSHHFLHFSSSPPSQTPPAVSPSDEFNESELFWTADFVSSSNN 60

Query: 61  PFRSRNISSDDRASSFV-PPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
             RSR ISSDDRASSF+ PPNSGILAALSDD+ ++RK+R GTILTR++S+     S SSS
Sbjct: 61  SSRSRRISSDDRASSFIPPPNSGILAALSDDSSYNRKKRIGTILTRDTSIT---KSPSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
            RSIPRP+Q++RDYSQS P RKFQQSAPI VP  MRK RNNGE    E E+++EE+MLPP
Sbjct: 121 MRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRNNGE--HVEREEEEEEQMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV RGSG+SPNTTFSVLEG GRTLKGRDLRRVRNAVWHRTGF+D
Sbjct: 181 HEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 221

[Close]

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL
Match: A0A6J1CU69 (uncharacterized protein LOC111014325 OS=Momordica charantia OX=3673 GN=LOC111014325 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-70
Identity = 161/231 (69.70%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 1   MDSS--PAAAGYLLRHSSSSSHHFLDLFSSPPP---PPSAVVSGSDEFHESEVFWTADLA 60
           MDSS   AA+GYLLR SSSSSHHFL LFSSPPP   PP +  + SDEF+ESEVFWT D A
Sbjct: 1   MDSSAPAAASGYLLRQSSSSSHHFLHLFSSPPPSSYPPPSDAAASDEFNESEVFWTGDFA 60

Query: 61  VSNNRPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERT--GTILTRESSMAMAI 120
           +SNNR FRSR IS DD  SS    NSG+LAAL+DD D DRK+R   GT+LTR +S++ AI
Sbjct: 61  LSNNRQFRSR-ISRDDGGSS--SGNSGVLAALTDDFDGDRKQRVGIGTVLTRGNSISAAI 120

Query: 121 SSSSSSSRSIPRPIQTSRDYSQSTP-FRKFQQSAPINVPMRKQRNNGEIFAAEDEDDQEE 180
             S SSSRSIPRP+Q  R+YSQS P  RKFQQSAPINVP  +++ NG+I A      +EE
Sbjct: 121 --SPSSSRSIPRPLQNVREYSQSVPSSRKFQQSAPINVPAMRKQRNGDIVA------EEE 180

Query: 181 EMLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           EMLPPHEIV+RGSGVSP TTFSVLEGVGRTLKGRDLRRVRNAVWH+TGFLD
Sbjct: 181 EMLPPHEIVARGSGVSPKTTFSVLEGVGRTLKGRDLRRVRNAVWHKTGFLD 220

[Close]

BLAST of Lcy06g019840.1 vs. NCBI nr
Match: XP_023005734.1 (uncharacterized protein LOC111498642 [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 6.2e-85
Identity = 174/226 (76.99%), Postives = 198/226 (87.61%), Query Frame = 0


Query: 1   MDSSPAAA-GYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNN 60
           MDSSPAAA  + LRHSSS SHH+LDLFSSPPP   +VV+ SDEF+ESEVFWT+D A SNN
Sbjct: 1   MDSSPAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSVVASSDEFNESEVFWTSDFAQSNN 60

Query: 61  RPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
           RPFR+R IS++DR SSF PPNSGILAALSDDADF+ K+R GTI+TRE++MAMAI  SSSS
Sbjct: 61  RPFRTRKISTEDRTSSFDPPNSGILAALSDDADFNSKQRIGTIVTRETTMAMAI--SSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
           SR IP+PIQ+S++YSQS P RKFQQSAPINVP  MRKQRNN EI AAE+E+D  EEMLPP
Sbjct: 121 SRWIPKPIQSSKEYSQSMPSRKFQQSAPINVPKAMRKQRNNDEIRAAEEEED--EEMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV+RG GV PNTTFS+LEGVGRTLKGRDLR+VRNAVWHRTGF+D
Sbjct: 181 HEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 222

[Close]

BLAST of Lcy06g019840.1 vs. NCBI nr
Match: XP_022943240.1 (uncharacterized protein LOC111448027 [Cucurbita moschata] >KAG6596585.1 hypothetical protein SDJN03_09765, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028122.1 hypothetical protein SDJN02_09302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82
Identity = 172/230 (74.78%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 1   MDSSPAAA-----GYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLA 60
           MDSSPAAA      + LRHSSS SHH+LDLFSSPPP   + V+ SDEF+ESEVFWT+D A
Sbjct: 49  MDSSPAAASAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFA 108

Query: 61  VSNNRPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISS 120
            SNNRPFR+R IS++DR SSF  PNSGILAALSDDADF+ K+R GTI+TRE+SMAMAI  
Sbjct: 109 QSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAI-- 168

Query: 121 SSSSSRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEE 180
           SSSSSRSIP+PIQ+SR+YSQS P RKFQQSAPINVP  MRKQR N EI AA  E++++EE
Sbjct: 169 SSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAA-EEEEDEE 228

Query: 181 MLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           MLPPHEIV+RG GV PNTTFS+LEGVGRTLKGRDLR+VRNAVWHRTGF+D
Sbjct: 229 MLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 275

[Close]

BLAST of Lcy06g019840.1 vs. NCBI nr
Match: XP_023539527.1 (uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 169/226 (74.78%), Postives = 194/226 (85.84%), Query Frame = 0


Query: 1   MDSSPAAA-GYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNN 60
           MDSSPAAA  + LRHSSS  HH+LDLFSSPPP   + V+ SDEF+ESEVFWT+D A SNN
Sbjct: 1   MDSSPAAASAFTLRHSSSPGHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNN 60

Query: 61  RPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
           RPFR+R IS++DR SSF   NSGILAALSD+ADF+ ++R GTI+TRE+SMAMAI  SSSS
Sbjct: 61  RPFRTRKISTEDRTSSFDLSNSGILAALSDNADFNSEQRIGTIVTRETSMAMAI--SSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
           SRSIP+PIQ+SR+YSQS P RKFQQSAPINVP  M+KQRNN EI A E+E+D  EEMLPP
Sbjct: 121 SRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKSMKKQRNNDEIRATEEEED--EEMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV+RG GV PNTTFS+LEGVGRTLKGRDLR+VRNAVWHRTGF+D
Sbjct: 181 HEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 222

[Close]

BLAST of Lcy06g019840.1 vs. NCBI nr
Match: XP_008442865.1 (PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo] >KAA0043858.1 Senescence regulator [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 3.8e-74
Identity = 159/226 (70.35%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MDSSPAAAGYLLRHSSSSSHHFLDLFSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNNR 60
           MD   A A  LLRHSS SSHHFL   SSPP      VS SDEF+ESE+FWTAD   S+N 
Sbjct: 1   MDLYTATAASLLRHSSPSSHHFLHFSSSPPSQTPPAVSPSDEFNESELFWTADFVSSSNN 60

Query: 61  PFRSRNISSDDRASSFV-PPNSGILAALSDDADFDRKERTGTILTRESSMAMAISSSSSS 120
             RSR ISSDDRASSF+ PPNSGILAALSDD+ ++RK+R GTILTR++S+     S SSS
Sbjct: 61  SSRSRRISSDDRASSFIPPPNSGILAALSDDSSYNRKKRIGTILTRDTSIT---KSPSSS 120

Query: 121 SRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP--MRKQRNNGEIFAAEDEDDQEEEMLPP 180
            RSIPRP+Q++RDYSQS P RKFQQSAPI VP  MRK RNNGE    E E+++EE+MLPP
Sbjct: 121 MRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRNNGE--HVEREEEEEEQMLPP 180

Query: 181 HEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           HEIV RGSG+SPNTTFSVLEG GRTLKGRDLRRVRNAVWHRTGF+D
Sbjct: 181 HEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 221

[Close]

BLAST of Lcy06g019840.1 vs. NCBI nr
Match: XP_022144701.1 (uncharacterized protein LOC111014325 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 5.6e-70
Identity = 161/231 (69.70%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 1   MDSS--PAAAGYLLRHSSSSSHHFLDLFSSPPP---PPSAVVSGSDEFHESEVFWTADLA 60
           MDSS   AA+GYLLR SSSSSHHFL LFSSPPP   PP +  + SDEF+ESEVFWT D A
Sbjct: 1   MDSSAPAAASGYLLRQSSSSSHHFLHLFSSPPPSSYPPPSDAAASDEFNESEVFWTGDFA 60

Query: 61  VSNNRPFRSRNISSDDRASSFVPPNSGILAALSDDADFDRKERT--GTILTRESSMAMAI 120
           +SNNR FRSR IS DD  SS    NSG+LAAL+DD D DRK+R   GT+LTR +S++ AI
Sbjct: 61  LSNNRQFRSR-ISRDDGGSS--SGNSGVLAALTDDFDGDRKQRVGIGTVLTRGNSISAAI 120

Query: 121 SSSSSSSRSIPRPIQTSRDYSQSTP-FRKFQQSAPINVPMRKQRNNGEIFAAEDEDDQEE 180
             S SSSRSIPRP+Q  R+YSQS P  RKFQQSAPINVP  +++ NG+I A      +EE
Sbjct: 121 --SPSSSRSIPRPLQNVREYSQSVPSSRKFQQSAPINVPAMRKQRNGDIVA------EEE 180

Query: 181 EMLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           EMLPPHEIV+RGSGVSP TTFSVLEGVGRTLKGRDLRRVRNAVWH+TGFLD
Sbjct: 181 EMLPPHEIVARGSGVSPKTTFSVLEGVGRTLKGRDLRRVRNAVWHKTGFLD 220

[Close]

BLAST of Lcy06g019840.1 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 85/239 (35.56%), Postives = 118/239 (49.37%), Query Frame = 0


Query: 26  FSSPPPPPSAVVSGSDEFHESEVFWTADLAVSNNRPFRSRNISSDDRASSFVPPN----- 85
           FSSP    +   S   E +E ++F   D+   ++ P ++R+      A    P       
Sbjct: 9   FSSPSSLATISDSADGELNEDDIF-AIDI---SHAPPQARHSPVSSPAKQQTPARQLQRS 68

Query: 86  ---------SGILAALSDDAD--------FDRKER-------TGTILTRESSMAMAISSS 145
                    SGILAAL + +         F  K         + T  +  SS   A + S
Sbjct: 69  KSGLKNVEASGILAALPESSGSSSYLSHVFHHKPAAALSTSVSSTASSSSSSGGGASAGS 128

Query: 146 SSSSRSI---PRPIQTSRDYSQS-TPFRKFQQSAPINVP------MRKQRNNGEIFAAED 205
           SSS+R+I   P+P Q    +S S     K+ QSAP+ VP      M + +   ++    D
Sbjct: 129 SSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDVVD 188

Query: 206 EDDQEE--EMLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           +D++EE  EMLPPHEIV+R    S   + SVLEG GRTLKGRDLR+VRNAV+ RTGF+D
Sbjct: 189 DDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

[Close]

BLAST of Lcy06g019840.1 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 87  LSDDADFDRKE-----RTGTILTRESSMAMAISSSSSSSRSIPRPIQTSRDYSQSTPFRK 146
           +  D +F  ++     R G   + E  +  +  SSSSSS S P  I+ S++ S       
Sbjct: 21  IEGDEEFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVK---- 80

Query: 147 FQQSAPINVP--------MRKQRNNGEIFA-AEDEDDQEEE--MLPPHEIVSRGSGVSPN 206
            Q SAP+NVP         +  R +  + + A D+DD++++  M+PPHE V+R    +  
Sbjct: 81  -QSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQI 140

Query: 207 TTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           ++FS+ EGVGRTLKGRDL +VRNAV  +TGFL+
Sbjct: 141 SSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of Lcy06g019840.1 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 97  ERTGTILTRESSMAMAISSSSSSSRSIPRPIQTSRDYSQSTPFRKFQQSAPINVP----- 156
           E  G  +    S  +  +SSSSS+R IP+  + S    QS        SAP+N+P     
Sbjct: 20  ETQGPEMKMSKSNNLFSASSSSSARYIPKGNEVSGGAKQS--------SAPMNIPDWSKV 79

Query: 157 --MRKQRNNGEIFAAEDEDDQEEEMLPPHEIVSRGSGVSPNTTFSVLEGVGRTLKGRDLR 216
               K+  +  + +   +DD E  M+PPHE+V++    +  ++FS+ EG+GRTLKGRDL 
Sbjct: 80  YGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLS 139

Query: 217 RVRNAVWHRTGFLD 224
           + RNAV  RTGFL+
Sbjct: 140 KTRNAVLTRTGFLE 145

[Close]

BLAST of Lcy06g019840.1 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 72.0 bits (175), Expect = 6.8e-13
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 140 RKFQQSAPINVP----MRKQRNNGEIFAAEDEDDQEEE--MLPPHEIV----SRGSGVSP 199
           RK   SAP+NVP    + +  +   I   +DEDD++EE  M+PPHE +    +R S    
Sbjct: 110 RKLASSAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIG 169

Query: 200 NTTFSVLEGVGRTLKGRDLRRVRNAVWHRTGF 222
               SV +GVGRTLKGR+LRRVR+A+W +TGF
Sbjct: 170 GGGASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of Lcy06g019840.1 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-12
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 145 SAPINVP----MRKQRNNGEIFAAEDEDDQEEE----------MLPPHEIVSRGSGVSPN 204
           S P+N+P    + K    G     +D DD +E+          M+PPHE ++R  G    
Sbjct: 78  SLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRRMIPPHEYLARRRG---- 137

Query: 205 TTFSVLEGVGRTLKGRDLRRVRNAVWHRTGFLD 224
           ++F+V EG+G T KGRDLRR+RNA+W + GF D
Sbjct: 138 SSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

The following BLAST results are available for this feature:

BLAST of Lcy06g019840.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g019840.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L041	3.0e-85	76.99	uncharacterized protein LOC111498642 OS=Cucurbita maxima OX=3661 GN=LOC111498642...	[more]
A0A6J1FXK6	6.3e-83	74.78	uncharacterized protein LOC111448027 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A5A7TLX9	1.8e-74	70.35	Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236...	[more]
A0A1S3B6S2	1.8e-74	70.35	uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=...	[more]
A0A6J1CU69	2.7e-70	69.70	uncharacterized protein LOC111014325 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Lcy06g019840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005734.1	6.2e-85	76.99	uncharacterized protein LOC111498642 [Cucurbita maxima]	[more]
XP_022943240.1	1.3e-82	74.78	uncharacterized protein LOC111448027 [Cucurbita moschata] >KAG6596585.1 hypothet...	[more]
XP_023539527.1	1.4e-81	74.78	uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo]	[more]
XP_008442865.1	3.8e-74	70.35	PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo] >KAA0043858.1 Sen...	[more]
XP_022144701.1	5.6e-70	69.70	uncharacterized protein LOC111014325 [Momordica charantia]	[more]

BLAST of Lcy06g019840.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15040.1	1.4e-18	35.56	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.6e-14	37.91	Protein of unknown function, DUF584	[more]
AT4G21970.1	1.6e-14	38.06	Protein of unknown function, DUF584	[more]
AT1G61930.1	6.8e-13	46.74	Protein of unknown function, DUF584	[more]
AT5G03230.1	5.7e-12	39.78	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 42..223 e-value: 2.5E-40 score: 139.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..76
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 13..223
None	No IPR available	PANTHER	PTHR33083:SF95	OS01G0862600 PROTEIN	coord: 13..223

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g019840	Lcy06g019840	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g019840.1.exon1	Lcy06g019840.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g019840.1.utr3p1	Lcy06g019840.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g019840.1.cds1	Lcy06g019840.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g019840.1.utr5p1	Lcy06g019840.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g019840.1	Lcy06g019840.1-protein	polypeptide