Lcy06g014470.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g014470.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr06: 27935984 .. 27937053 (-)
Sequence length	708
RNA-Seq Expression	Lcy06g014470.1
Synteny	Lcy06g014470.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCATCAGCTGGCAAGGAAACTCTTATAAAGGAAGTGGCTCAGGCCATTCCAACGTACACCCTCTTTTGTTTCAAACTTCCACAGGGTTGCTGTGATGAGCTGAATAGGATGATGGCTAATTTCTGGTGGGGTAGCTCTGAACAAGGGAGGAAAATTCACTGGCTGAAGTGGGGAGCAATGAAAAAACCAAAGGACAGAGGAGGAATGGGGTTCAGAGACATAAGGCTTTTCAATCAAGCTTTGTTGGCGAAACACACTTGGCGCATACTTCAAAGACCTCAATCTTTAGTGGCACAAGTTCTGAAAGCGAGATACTATCCTAATCATGATTTTTTGAATGCAAGTTTGGGGGGCAGACCATCATATGTATGGCGAGGAATTTTATGGGGCCGAGAGCTAGCGATGAAAGGTGGTCGCTGGAGGATTGGGAATGGTGAAACAATTGACATCTATGAGGACAAGTGGATTCCAAGGATGAAGACTTTTAAACTTCTCTCTCTCAAACGCCCTCTGACTGACTACCGAGTCAAAAGCCTTTTCTCTAGTAGTCAATCATGGAATGTAAATCTTCTAACAGATCTTTTTATGCAGGATGATGTAGTAAAAATCCAGGAGATTCCTATTTGCAGGTGCCCAACACCCTGACAGTTTCTTCTGGCACTATGATAAACGAGGCAAATACACTGTTCGGAGTGGGTACAAGCTTGCTATGGAAGAGATCCAGGGAGAATCATCATCATCTGATTCATCTATTTCCAGTTGGTGGAACCTACTCTGGAATCTAAAAATACCAAACAAAACCAAGATCTTTGTTTGGAGAGCCAGTTTAGATATTTTACCCTGTAGGATGAACATCATAAAAAGACATATTCCTTGTGACCCATGTTGTCCTATGTGCAGGAAAAGAGATGAGACAACCATCCATGCTCTTTGGGAGTGTAAGAAGATCAAGAAGCATTGGGCTCGGTGGAGCCCGGTGCAAATTTTTATAAATGACCATTTTACTAATACCCTCGACCTTTTCTGCAGGGCCCAGGAGACTCTATGCATGGACGATATATTGA

mRNA sequence

ATGTTCTCATCAGCTGGCAAGGAAACTCTTATAAAGGAAGTGGCTCAGGCCATTCCAACGTACACCCTCTTTTGTTTCAAACTTCCACAGGGTTGCTGTGATGAGCTGAATAGGATGATGGCTAATTTCTGGTGGGGTAGCTCTGAACAAGGGAGGAAAATTCACTGGCTGAAGTGGGGAGCAATGAAAAAACCAAAGGACAGAGGAGGAATGGGGTTCAGAGACATAAGGCTTTTCAATCAAGCTTTGTTGGCGAAACACACTTGGCGCATACTTCAAAGACCTCAATCTTTAGTGGCACAAGTTCTGAAAGCGAGATACTATCCTAATCATGATTTTTTGAATGCAAGTTTGGGGGGCAGACCATCATATGTATGGCGAGGAATTTTATGGGGCCGAGAGCTAGCGATGAAAGGTGGTCGCTGGAGGATTGGGAATGGTGAAACAATTGACATCTATGAGGACAAGTGGATTCCAAGGATGAAGACTTTTAAACTTCTCTCTCTCAAACGCCCTCTGACTGACTACCGAGTCAAAAGCCTTTTCTCTAGTAGTCAATCATGGAATGTAAATCTTCTAACAGATCTTTTTATGCAGGATGATGTAGTAAAAATCCAGGAGATTCCTATTTGCAGGAAAAGAGATGAGACAACCATCCATGCTCTTTGGGAGTGGCCCAGGAGACTCTATGCATGGACGATATATTGA

Coding sequence (CDS)

ATGTTCTCATCAGCTGGCAAGGAAACTCTTATAAAGGAAGTGGCTCAGGCCATTCCAACGTACACCCTCTTTTGTTTCAAACTTCCACAGGGTTGCTGTGATGAGCTGAATAGGATGATGGCTAATTTCTGGTGGGGTAGCTCTGAACAAGGGAGGAAAATTCACTGGCTGAAGTGGGGAGCAATGAAAAAACCAAAGGACAGAGGAGGAATGGGGTTCAGAGACATAAGGCTTTTCAATCAAGCTTTGTTGGCGAAACACACTTGGCGCATACTTCAAAGACCTCAATCTTTAGTGGCACAAGTTCTGAAAGCGAGATACTATCCTAATCATGATTTTTTGAATGCAAGTTTGGGGGGCAGACCATCATATGTATGGCGAGGAATTTTATGGGGCCGAGAGCTAGCGATGAAAGGTGGTCGCTGGAGGATTGGGAATGGTGAAACAATTGACATCTATGAGGACAAGTGGATTCCAAGGATGAAGACTTTTAAACTTCTCTCTCTCAAACGCCCTCTGACTGACTACCGAGTCAAAAGCCTTTTCTCTAGTAGTCAATCATGGAATGTAAATCTTCTAACAGATCTTTTTATGCAGGATGATGTAGTAAAAATCCAGGAGATTCCTATTTGCAGGAAAAGAGATGAGACAACCATCCATGCTCTTTGGGAGTGGCCCAGGAGACTCTATGCATGGACGATATATTGA

Protein sequence

MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGAMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGGRPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKSLFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPRRLYAWTIY

Homology

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BLAST of Lcy06g014470.1 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-33
Identity = 64/143 (44.76%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 17  AIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGAMKKPK-DRGGMGFRD 76
           A+P Y + CF+L +  C +L   M  FWW S E  RKI W+ W  + K K D GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 77  IRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGGRPSYVWRGILWGREL 136
           +  FNQALLAK ++RI+ +P +L++++L++RY+P+   +  S+G RPSY WR I+ GREL
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 137 AMKGGRWRIGNGETIDIYEDKWI 159
             +G    IG+G    ++ D+WI
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWI 144

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 0


Query: 3   SSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGAM 62
           S AG+ TL K V  ++P +++    LPQ   + L+++   F WGS+ + +K H +KW  +
Sbjct: 33  SFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKV 92

Query: 63  KKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPN--HDFLNASLGG 122
             PK  GG+G R  +  N+AL++K  WR+LQ   SL   VL+ +Y+     D       G
Sbjct: 93  CSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKG 152

Query: 123 RPSYVWRGILWG-RELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRV- 182
             S  WR I  G R++   G  W  G+G+ I  + D+W+      +L + +RP     V 
Sbjct: 153 SWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVV 212

Query: 183 -KSLFSSSQSWN 190
            K L+   + W+
Sbjct: 213 AKDLWIPGRGWD 224

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE LIK V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 486 LLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 545

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 546 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 605

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++WR + WG+EL  KG RWR+G+G +I +Y DKW+P    FK++S  +     RV  
Sbjct: 606 NPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCD 665

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V  I +IP+        +  +W + R
Sbjct: 666 LFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL--IWHYER 710

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE LIK V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 449 LLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 508

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 509 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 568

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++WR + WG+EL  KG RWR+G+G +I +Y DKW+P    FK++S  +     RV  
Sbjct: 569 NPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCD 628

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V  I +IP+        +  +W + R
Sbjct: 629 LFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL--IWHYER 673

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL
Match: M5WJW2 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G011200 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.0e-59
Identity = 109/227 (48.02%), Postives = 150/227 (66.08%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE LIK V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 736 LLSRAGKEILIKAVLQAIPTYSMSCFQIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 795

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 796 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 855

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++W  + WG+EL  KG RWR+G+G +I +Y DKW+P    FK++S  +     RV  
Sbjct: 856 NPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCD 915

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V  I +IP+        +  +W + R
Sbjct: 916 LFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL--IWHYER 960

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.1e-59
Identity = 108/227 (47.58%), Postives = 149/227 (65.64%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE L+K V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 715 LLSRAGKEILMKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 774

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 775 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 834

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++WR + WG+EL  KG RWR+GNG +I +Y DKW+P    FK++S  +      V  
Sbjct: 835 NPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCD 894

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V    +IP+        +  +W + R
Sbjct: 895 LFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL--IWHYER 939

[Close]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58
Identity = 109/228 (47.81%), Postives = 148/228 (64.91%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           +FS  GKE LIK VAQAIP YT+ CF+LP+    E + + A FWWGSS++ +KIHW+ W 
Sbjct: 576 LFSIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWN 635

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
           ++  PK  GGMGFRD+ LFN+ALLAK  WRIL  P S++++VLK RY+ +  F+ A + G
Sbjct: 636 SLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISG 695

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PSY+WR ILWGR+L  KG RWRIGNG+++ IY D W+P   T K+LS  R     RV S
Sbjct: 696 NPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSS 755

Query: 181 LFSSSQ-SWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           L    +  W  +++ D F  D+   I  IPI R  +E  +  +W + +
Sbjct: 756 LVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL--IWNYEK 801

[Close]

BLAST of Lcy06g014470.1 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-60
Identity = 109/229 (47.60%), Postives = 150/229 (65.50%), Query Frame = 0


Query: 2   FSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGA 61
           F+S GKE LIK VAQAIPTY +  FK+P G C+++ + MA FWWG+ +  + IHW +W  
Sbjct: 583 FTSGGKEVLIKAVAQAIPTYAMSVFKIPLGLCEDIQKAMARFWWGTKQDRKGIHWARWER 642

Query: 62  MKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGGR 121
           +   K RGGMGFRD+  FNQAL+AK  WRI+Q P SLVA+VLKARY+ +  F+NA LG +
Sbjct: 643 ISHSKARGGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGLGSK 702

Query: 122 PSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKSL 181
           PS+VWR I+WGR++  KG RWRIGNG+ + +Y + WIPR  TFK +S     TD  V  L
Sbjct: 703 PSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAEL 762

Query: 182 FSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPRRLY 231
               Q W  +L+   F  +D   I +IP+ ++  E  +  +W + ++ Y
Sbjct: 763 IDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQL--IWHYDKKGY 809

[Close]

BLAST of Lcy06g014470.1 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 242.7 bits (618), Expect = 3.3e-60
Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE LIK V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 449 LLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 508

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 509 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 568

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++WR + WG+EL  KG RWR+G+G +I +Y DKW+P    FK++S  +     RV  
Sbjct: 569 NPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCD 628

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V  I +IP+        +  +W + R
Sbjct: 629 LFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL--IWHYER 673

[Close]

BLAST of Lcy06g014470.1 vs. NCBI nr
Match: ONI09819.1 (hypothetical protein PRUPE_4G011200 [Prunus persica])

HSP 1 Score: 240.0 bits (611), Expect = 2.1e-59
Identity = 109/227 (48.02%), Postives = 150/227 (66.08%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE LIK V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 736 LLSRAGKEILIKAVLQAIPTYSMSCFQIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 795

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 796 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 855

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++W  + WG+EL  KG RWR+G+G +I +Y DKW+P    FK++S  +     RV  
Sbjct: 856 NPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCD 915

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V  I +IP+        +  +W + R
Sbjct: 916 LFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL--IWHYER 960

[Close]

BLAST of Lcy06g014470.1 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 108/227 (47.58%), Postives = 149/227 (65.64%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           + S AGKE L+K V QAIPTY++ CF++P+G C ELN +MA FWW  ++  R IHW+KW 
Sbjct: 715 LLSRAGKEILMKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWE 774

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
            + K K  GG+GFRD+  FNQALLAK  WRIL+ P+SLVA++ +ARY+P+  FL A +G 
Sbjct: 775 LLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGT 834

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PS++WR + WG+EL  KG RWR+GNG +I +Y DKW+P    FK++S  +      V  
Sbjct: 835 NPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCD 894

Query: 181 LFSSSQSWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           LF+SS  WNV LL D+F   +V    +IP+        +  +W + R
Sbjct: 895 LFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL--IWHYER 939

[Close]

BLAST of Lcy06g014470.1 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 235.0 bits (598), Expect = 6.8e-58
Identity = 109/228 (47.81%), Postives = 148/228 (64.91%), Query Frame = 0


Query: 1   MFSSAGKETLIKEVAQAIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWG 60
           +FS  GKE LIK VAQAIP YT+ CF+LP+    E + + A FWWGSS++ +KIHW+ W 
Sbjct: 576 LFSIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWN 635

Query: 61  AMKKPKDRGGMGFRDIRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGG 120
           ++  PK  GGMGFRD+ LFN+ALLAK  WRIL  P S++++VLK RY+ +  F+ A + G
Sbjct: 636 SLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISG 695

Query: 121 RPSYVWRGILWGRELAMKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKRPLTDYRVKS 180
            PSY+WR ILWGR+L  KG RWRIGNG+++ IY D W+P   T K+LS  R     RV S
Sbjct: 696 NPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSS 755

Query: 181 LFSSSQ-SWNVNLLTDLFMQDDVVKIQEIPICRKRDETTIHALWEWPR 228
           L    +  W  +++ D F  D+   I  IPI R  +E  +  +W + +
Sbjct: 756 LVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL--IWNYEK 801

[Close]

BLAST of Lcy06g014470.1 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 8.3e-38
Identity = 77/201 (38.31%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 17  AIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGAMKKPKDRGGMGFRDI 76
           A+PTYT+ CF LP+  C ++  ++A+FWW + ++ + +HW  W  +   K  GG+GF+DI
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 77  RLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGGRPSYVWRGILWGRELA 136
             FN ALL K  WR+L RP+SL+A+V K+RY+   D LNA LG RPS+VW+ I   +E+ 
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 137 MKGGRWRIGNGETIDIYEDKWIPRMKTFKLLSLKR-PLTDY-------RVKSLF-SSSQS 196
            +G R  +GNGE I I+  KW+        L ++R P  +Y       +V  L   S + 
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181

Query: 197 WNVNLLTDLFMQDDVVKIQEI 209
           W  +++  LF + +   I E+
Sbjct: 182 WRKDVIEMLFPEVERKLIGEL 202

[Close]

BLAST of Lcy06g014470.1 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 64/143 (44.76%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 17  AIPTYTLFCFKLPQGCCDELNRMMANFWWGSSEQGRKIHWLKWGAMKKPK-DRGGMGFRD 76
           A+P Y + CF+L +  C +L   M  FWW S E  RKI W+ W  + K K D GG+GFRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 77  IRLFNQALLAKHTWRILQRPQSLVAQVLKARYYPNHDFLNASLGGRPSYVWRGILWGREL 136
           +  FNQALLAK ++RI+ +P +L++++L++RY+P+   +  S+G RPSY WR I+ GREL
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 137 AMKGGRWRIGNGETIDIYEDKWI 159
             +G    IG+G    ++ D+WI
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:

BLAST of Lcy06g014470.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	1.6e-33	44.76	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	1.8e-21	31.77	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy06g014470.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5W5F3	1.6e-60	48.46	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	1.6e-60	48.46	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
M5WJW2	1.0e-59	48.02	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
A0A5E4FZN9	5.1e-59	47.58	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
A0A6J1DAR4	3.3e-58	47.81	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Lcy06g014470.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024037590.1	2.5e-60	47.60	uncharacterized protein LOC112097210 [Citrus clementina]	[more]
ONI01138.1	3.3e-60	48.46	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
ONI09819.1	2.1e-59	48.02	hypothetical protein PRUPE_4G011200 [Prunus persica]	[more]
VVA32947.1	1.1e-58	47.58	PREDICTED: retrotransposon [Prunus dulcis]	[more]
XP_022150918.1	6.8e-58	47.81	uncharacterized protein LOC111018954 [Momordica charantia]	[more]

BLAST of Lcy06g014470.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	8.3e-38	38.31	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	1.1e-34	44.76	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 3..217
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 3..217

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g014470	Lcy06g014470	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g014470.1.exon3	Lcy06g014470.1.exon3	exon
Lcy06g014470.1.exon2	Lcy06g014470.1.exon2	exon
Lcy06g014470.1.exon1	Lcy06g014470.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g014470.1.cds3	Lcy06g014470.1.cds3	CDS
Lcy06g014470.1.cds2	Lcy06g014470.1.cds2	CDS
Lcy06g014470.1.cds1	Lcy06g014470.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g014470.1	Lcy06g014470.1-protein	polypeptide