Lcy06g014180.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g014180.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribonuclease H-like superfamily protein
Location	Chr06: 26711584 .. 26713222 (+)
Sequence length	1236
RNA-Seq Expression	Lcy06g014180.1
Synteny	Lcy06g014180.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTCGTGCCTTTATCAGTATTTGGGCCTCCCTTCCTTTGTGCCTCGCAACCGGGCCGGTACATTGAAATTCTTCAAGGATAGAGTTTGGAAGCAGGTCCAAGGGTGGAAGGGAAGTTCTTCTCCACTAGGGGTAAAAAGGTCCTTCTTAAGTCAGTCGTACAAGCTATTCCATGCTACACGATGAACTGCTTCATATTGCCGAAGGGTGTGATTCGGGAGATTCATCGTTTGATGGATAACTTTTGGTGGGGTGGCTCGGAGGAGGCTAGGCTAATCCATTGGATGAATTGGGAGTCCCTTTGCCTTCCTAAGTGTTTGGGTGGTTTGGGCTTTCGGAATATGGAACTTTTTAATCAAGCCCTGTTGGCCAAACAATGTTGGCAGATCTTCCATGAGCCTCACTCCCTCATTGGGTTAGTTCTAAAGGGTCGCTATTTCCCTACTTCGAGTTTTTTTTAGGCTAAGCTGGGCCATCAGCCTTCTTTTGTTTGGCGGAGTCTGCTATGGGGTCGTGAGTTATTCATCTAACTGGCTTCTGAATGATCATGGTCTCCAGATCCATTCTTTCCCCACTCTGTCGTTGACAAGCCGGATCTGTGAGTTGTTTTCTGCCTCAGGTCAGTGGGATGAGGAGAAAATATGGTTGCATTTTACGGCGTTGGATTGTGACTCAATTTTGCGGATCCCCCTACTTAATGCTACGGCTGATGACCATCTAATATGGCATTTTGAGAAGGATGGGTTGTTTACTGTGAAGAGCGGATGCCGGCTAGAGCTTAGTTTGATGATTCAAGGTCGCCCGTCGTCATCTGATAACTCCCAGTGGCGGGGTTGGTGGTCTGGGATTTGGAGATTGAATGTTCTGAGTAAAATCAAGTTCTTCTTGTGGAGGTTGTCAAATAACTGGTTGCCCACAAAGGATAACTTCCTTCGACGAGTTATGGACATTTCTAATTTATGTGTGTTCTGCCAAGCTTCTGTGGAGGATTGTCTTCATGTTTTTTGGGTGTGTCCATTTGTGAAATATTTGTGGCGTTGCTCTAAGTTTGAGTCCCTTTATCAGTTATTAATTTCCTTAAATTTTGAATCAATTCTGTGGGATGTTAAGGATAAACTGGCTATGTTGGATTTTGAACTTGTTGTAGTGTTTTGGTGGGCAATATGGAATCTGTGTAACTCATTGGTTTGGGGAGGGAATGTTGTTGAAAATGACTTAATTCAGTGGGCCTCTGATTATTTAGTTTCTTTCCAACGTACTACAACATCTCGAGGGGTGGTATCTTCATGTAGCTCTCTGTCCCCTTCTAATCGGGTGGCCTGCACTTGGAAGCCGCCATTGGAGCTTGATATAAAACTGAATTTAGAGGCTTCGGTTAGGCCGGAAACTGGGACTGTGGGGGGTGGCTTCATTCTGCGTAATGCGAGGGGTGAAGTCTTACTAGCAACGTGTATTCGTCTTCCTCGATGTTGGTGTGTGGATGTGGCCGAAGGTTGGGCTCTTCTCACTGGAGTCCAAGTTGCACGACAAGCTGGGTTTTCGAAGTTTCATGTGGAGACGGACTCTCTGAGGTTAGTCAAGATTTTAAATGGGGAGTCTGATGATGCCTCTGAGGTTAGCTTGCTCATGGATTAG

mRNA sequence

ATGTGGGTCGTGCCTTTATCAGTATTTGGGCCTCCCTTCCTTTGTGCCTCGCAACCGGGCCGGCTAAGCTGGGCCATCAGCCTTCTTTTGTTTGGCGGAGTCTGCTATGGGGTCGTGAGTTATTCATCTAACTGGCTTCTGAATGATCATGGTCTCCAGATCCATTCTTTCCCCACTCTGTCGTTGACAAGCCGGATCTGTGAGTTGTTTTCTGCCTCAGGTCAGTGGGATGAGGAGAAAATATGGTTGCATTTTACGGCGTTGGATTGTGACTCAATTTTGCGGATCCCCCTACTTAATGCTACGGCTGATGACCATCTAATATGGCATTTTGAGAAGGATGGGTTGTTTACTGTGAAGAGCGGATGCCGGCTAGAGCTTAGTTTGATGATTCAAGGTCGCCCGTCGTCATCTGATAACTCCCAGTGGCGGGGTTGGTGGTCTGGGATTTGGAGATTGAATGTTCTGAGTAAAATCAAGTTCTTCTTGTGGAGGTTGTCAAATAACTGGTTGCCCACAAAGGATAACTTCCTTCGACGAGTTATGGACATTTCTAATTTATGTGTGTTCTGCCAAGCTTCTGTGGAGGATTGTCTTCATGTTTTTTGGGTGTGTCCATTTGTGAAATATTTGTGGCGTTGCTCTAAGTTTGAGTCCCTTTATCAGTTATTAATTTCCTTAAATTTTGAATCAATTCTGTGGGATGTTAAGGATAAACTGGCTATGTTGGATTTTGAACTTGTTGTAGTGTTTTGGTGGGCAATATGGAATCTGTGTAACTCATTGGTTTGGGGAGGGAATGTTGTTGAAAATGACTTAATTCAGTGGGCCTCTGATTATTTAGTTTCTTTCCAACGTACTACAACATCTCGAGGGGTGGTATCTTCATGTAGCTCTCTGTCCCCTTCTAATCGGGTGGCCTGCACTTGGAAGCCGCCATTGGAGCTTGATATAAAACTGAATTTAGAGGCTTCGGTTAGGCCGGAAACTGGGACTGTGGGGGGTGGCTTCATTCTGCGTAATGCGAGGGGTGAAGTCTTACTAGCAACGTGTATTCGTCTTCCTCGATGTTGGTGTGTGGATGTGGCCGAAGGTTGGGCTCTTCTCACTGGAGTCCAAGTTGCACGACAAGCTGGGTTTTCGAAGTTTCATGTGGAGACGGACTCTCTGAGGTTAGTCAAGATTTTAAATGGGGAGTCTGATGATGCCTCTGAGGTTAGCTTGCTCATGGATTAG

Coding sequence (CDS)

ATGTGGGTCGTGCCTTTATCAGTATTTGGGCCTCCCTTCCTTTGTGCCTCGCAACCGGGCCGGCTAAGCTGGGCCATCAGCCTTCTTTTGTTTGGCGGAGTCTGCTATGGGGTCGTGAGTTATTCATCTAACTGGCTTCTGAATGATCATGGTCTCCAGATCCATTCTTTCCCCACTCTGTCGTTGACAAGCCGGATCTGTGAGTTGTTTTCTGCCTCAGGTCAGTGGGATGAGGAGAAAATATGGTTGCATTTTACGGCGTTGGATTGTGACTCAATTTTGCGGATCCCCCTACTTAATGCTACGGCTGATGACCATCTAATATGGCATTTTGAGAAGGATGGGTTGTTTACTGTGAAGAGCGGATGCCGGCTAGAGCTTAGTTTGATGATTCAAGGTCGCCCGTCGTCATCTGATAACTCCCAGTGGCGGGGTTGGTGGTCTGGGATTTGGAGATTGAATGTTCTGAGTAAAATCAAGTTCTTCTTGTGGAGGTTGTCAAATAACTGGTTGCCCACAAAGGATAACTTCCTTCGACGAGTTATGGACATTTCTAATTTATGTGTGTTCTGCCAAGCTTCTGTGGAGGATTGTCTTCATGTTTTTTGGGTGTGTCCATTTGTGAAATATTTGTGGCGTTGCTCTAAGTTTGAGTCCCTTTATCAGTTATTAATTTCCTTAAATTTTGAATCAATTCTGTGGGATGTTAAGGATAAACTGGCTATGTTGGATTTTGAACTTGTTGTAGTGTTTTGGTGGGCAATATGGAATCTGTGTAACTCATTGGTTTGGGGAGGGAATGTTGTTGAAAATGACTTAATTCAGTGGGCCTCTGATTATTTAGTTTCTTTCCAACGTACTACAACATCTCGAGGGGTGGTATCTTCATGTAGCTCTCTGTCCCCTTCTAATCGGGTGGCCTGCACTTGGAAGCCGCCATTGGAGCTTGATATAAAACTGAATTTAGAGGCTTCGGTTAGGCCGGAAACTGGGACTGTGGGGGGTGGCTTCATTCTGCGTAATGCGAGGGGTGAAGTCTTACTAGCAACGTGTATTCGTCTTCCTCGATGTTGGTGTGTGGATGTGGCCGAAGGTTGGGCTCTTCTCACTGGAGTCCAAGTTGCACGACAAGCTGGGTTTTCGAAGTTTCATGTGGAGACGGACTCTCTGAGGTTAGTCAAGATTTTAAATGGGGAGTCTGATGATGCCTCTGAGGTTAGCTTGCTCATGGATTAG

Protein sequence

MWVVPLSVFGPPFLCASQPGRLSWAISLLLFGGVCYGVVSYSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLNATADDHLIWHFEKDGLFTVKSGCRLELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESLYQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVENDLIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNGESDDASEVSLLMD

Homology

[Close]

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-49
Identity = 120/350 (34.29%), Postives = 184/350 (52.57%), Query Frame = 0


Query: 38   VVSYSSNWLLNDHGLQIHSFPTLSLTSRICELFS-ASGQWDEEKIWLHFTALDCDSILRI 97
            V  Y  NW+ N   L+I S P L L SR+  L     G W  + +   FT  +   IL I
Sbjct: 725  VFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSI 784

Query: 98   PLLNATADDHLIWHFEKDGLFTVKSGCRLEL--SLMIQGRPSSSDNSQWRGWWSGIWRLN 157
            P+     +D LIW++EK G+++V+SG ++ L  +  +Q  PSSS + + R WW+G W+++
Sbjct: 785  PIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMH 844

Query: 158  VLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRC 217
            + +KIK FLWRL  + LPT  N  +R ++I+N C FC  + ED +H+FW+C F + LW  
Sbjct: 845  IPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWIN 904

Query: 218  SKFESLYQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNV-----V 277
            SKF  L   L       IL +  + L+  DFE + V  W +WN  N+  +  +      +
Sbjct: 905  SKFGKLSPFL-------ILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKI 964

Query: 278  ENDLIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPE 337
              +L++WA+ Y + F      R   S+  +   +N     W+PP E   K+N +AS    
Sbjct: 965  GMELVEWANKYAMEF------REAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLAS 1024

Query: 338  TGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAG 380
                G G I+ N RG+V+ A    L     VD+AE  A + G+Q+A + G
Sbjct: 1025 DQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIG 1060

[Close]

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL
Match: A0A2H5Q972 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_207140 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-43
Identity = 112/368 (30.43%), Postives = 178/368 (48.37%), Query Frame = 0


Query: 41  YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
           + +NW+      +    PTL   + + EL +    WDEE I+ HF  +D D I +IPL  
Sbjct: 46  HKANWIPKPFTFKPVIKPTLPSKALVSELINGENCWDEELIYRHFDKMDADVITQIPLPR 105

Query: 101 ATADDHLIWHFEKDGLFTVKSGCRLELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIK 160
            + +D LIWHF K G +TVKSG +  L++     PSSS+ S  +  W+ IW L +  KI+
Sbjct: 106 RSREDELIWHFGKSGQYTVKSGYQTALNIRFPAMPSSSEFS--KNEWNIIWSLALPKKIR 165

Query: 161 FFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESL 220
            F+WR + N LP+ +N  +R +     C  C+  +E+  H    C   K +WR S F++ 
Sbjct: 166 IFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFDND 225

Query: 221 YQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVE-NDLIQWASD 280
            Q     +  S+L  VK   +  D +L     WA WN  N  ++ G       ++  A  
Sbjct: 226 IQAAPGQDILSLLHGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKRENPQSVVAKAEA 285

Query: 281 YLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPETGTVGGGFIL 340
            + +++R   S   V+              W PP E  +K+N +A+   E    G G ++
Sbjct: 286 VMEAYKRVQPSADKVAQLG-----------WNPPQEGFVKINTDAATNSEKNLAGLGAVI 345

Query: 341 RNARGEVLLATCIRLPRC-WCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNG 400
           R+  G+V  AT I++ +    V  AE  A+  G+QVA+ A      +E+DS  +V ++N 
Sbjct: 346 RDENGQV-TATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNN 399

Query: 401 ESDDASEV 407
                SE+
Sbjct: 406 RQGSRSEI 399

[Close]

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL
Match: A0A1S8AC01 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-42
Identity = 110/367 (29.97%), Postives = 170/367 (46.32%), Query Frame = 0


Query: 41  YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
           Y ++W+      +  S PTL   S +  L     QWDE KI+ HF  LD D I+ +PL  
Sbjct: 131 YKASWIPRPSTFRPTSRPTLPENSYVSMLIDDDNQWDEMKIYCHFDKLDADRIVSMPLPR 190

Query: 101 ATADDHLIWHFEKDGLFTVKSGCRLELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIK 160
              DD ++WH++K G ++VKSG ++ L L     PSSS N+     W  IW L++  K++
Sbjct: 191 QPKDDQILWHYDKKGRYSVKSGYQVALRLKFPALPSSSRNT--TNQWETIWALDLPEKLR 250

Query: 161 FFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESL 220
            F+WR + N LP+ +N  +R +    +C  C+  VE   H    C   + +WR ++F   
Sbjct: 251 IFMWRAATNLLPSTENLWKRKVAQEPICQICKNGVESIFHALVNCKTARKVWRLTQFAEE 310

Query: 221 YQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVENDLI-QWASD 280
            Q     +  S+L          D EL+V   W IW+  N  ++     +  ++   A  
Sbjct: 311 LQEEAGEDLLSLLKGRLCSRRKADIELLVAICWGIWSARNQFIFKLKKEDPQIVLAKAEA 370

Query: 281 YLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPETGTVGGGFIL 340
            L +++RT     +     +          W PPL    KLN++A+   +  T G G ++
Sbjct: 371 ILKAYKRTHVPAPIHMDQQAWKAQQ----DWSPPLAGWFKLNVDAATNRDKQTSGLGVVI 430

Query: 341 RNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNGE 400
           RNA G V+ A       C  V   E  A+  G+QVA  A      VETDS  +V  +N +
Sbjct: 431 RNAEGIVVAAAINCSKFCGDVAYVEAEAMEFGLQVAGNAKLPSLIVETDSQEVVDFVNNK 490

Query: 401 SDDASEV 407
                E+
Sbjct: 491 QSSMKEI 491

[Close]

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL
Match: A0A6J5UN51 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS28124 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.8e-42
Identity = 124/386 (32.12%), Postives = 193/386 (50.00%), Query Frame = 0


Query: 41   YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
            Y   W+  D    I S PTL +TSR+C+LF+ASG WD  K++  F+  + ++IL IPL+ 
Sbjct: 1321 YGDPWVPYDRFFTIQSIPTLPVTSRVCDLFTASGGWDVGKVFASFSFPEAEAILSIPLMG 1380

Query: 101  ATADDHLIWHFEKDGLFTVKSGC-------RL-ELSLMIQGRPSSSDNSQWRGWWSGIWR 160
             T  D  IW+F K+G ++VKSG        RL ELS      PSSS    W+     +W+
Sbjct: 1381 DTL-DRRIWNFTKNGRYSVKSGYWAALEYKRLEELSAGGVAGPSSSSLKSWK----HLWK 1440

Query: 161  LNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLW 220
            L V  KI   LWR++ + LP+K+   RR +    +C  C A+ E  LH    C     +W
Sbjct: 1441 LKVPQKIMHLLWRVAQDILPSKEVLFRRRITQGEVCCRCFAARETTLHALVGCDVCLQVW 1500

Query: 221  RCSKFESLYQLLISL----NFESILWDV--KDKLAMLDFELVVVFWWAIWNLCNSLVWGG 280
            +   F S + LL +L     +   +W +   DK ++  F +     W +WN  N +++G 
Sbjct: 1501 KALDFPSDF-LLPTLADVGTWMDAVWSIIPPDKQSLFAFTV-----WVLWNERNGVLFGS 1560

Query: 281  NVVEND-LIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEAS 340
                +  L+Q A DY   F+R + +    +  S  SP   +   W+PP     KLN++ +
Sbjct: 1561 QPTPSGILVQRAKDYDAEFKRYSAA----NHRSLSSPVRDI--KWRPPTGNCFKLNVDGA 1620

Query: 341  VRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHV 400
               ETG  G G I+R++ G+++ A  +R P    V   E +AL  G+  A         +
Sbjct: 1621 TDMETGARGAGAIVRDSHGKLVGALAMRAPSRISVLATELYALKIGISFALDMSLVPLEI 1680

Query: 401  ETDSLRLVKILNGESDDASEVSLLMD 412
            E+DSL+ V ++N E +  +    L+D
Sbjct: 1681 ESDSLQAVSMVNSEEECLAAEGGLVD 1689

[Close]

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL
Match: A0A6J5UN24 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS28123 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.8e-42
Identity = 124/386 (32.12%), Postives = 193/386 (50.00%), Query Frame = 0


Query: 41  YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
           Y   W+  D    I S PTL +TSR+C+LF+ASG WD  K++  F+  + ++IL IPL+ 
Sbjct: 171 YGDPWVPYDRFFTIQSIPTLPVTSRVCDLFTASGGWDVGKVFASFSFPEAEAILSIPLMG 230

Query: 101 ATADDHLIWHFEKDGLFTVKSGC-------RL-ELSLMIQGRPSSSDNSQWRGWWSGIWR 160
            T  D  IW+F K+G ++VKSG        RL ELS      PSSS    W+     +W+
Sbjct: 231 DTL-DRRIWNFTKNGRYSVKSGYWAALEYKRLEELSAGGVAGPSSSSLKSWK----HLWK 290

Query: 161 LNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLW 220
           L V  KI   LWR++ + LP+K+   RR +    +C  C A+ E  LH    C     +W
Sbjct: 291 LKVPQKIMHLLWRVAQDILPSKEVLFRRRITQGEVCCRCFAARETTLHALVGCDVCLQVW 350

Query: 221 RCSKFESLYQLLISL----NFESILWDV--KDKLAMLDFELVVVFWWAIWNLCNSLVWGG 280
           +   F S + LL +L     +   +W +   DK ++  F +     W +WN  N +++G 
Sbjct: 351 KALDFPSDF-LLPTLADVGTWMDAVWSIIPPDKQSLFAFTV-----WVLWNERNGVLFGS 410

Query: 281 NVVEND-LIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEAS 340
               +  L+Q A DY   F+R + +    +  S  SP   +   W+PP     KLN++ +
Sbjct: 411 QPTPSGILVQRAKDYDAEFKRYSAA----NHRSLSSPVRDI--KWRPPTGNCFKLNVDGA 470

Query: 341 VRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHV 400
              ETG  G G I+R++ G+++ A  +R P    V   E +AL  G+  A         +
Sbjct: 471 TDMETGARGAGAIVRDSHGKLVGALAMRAPSRISVLATELYALKIGISFALDMSLVPLEI 530

Query: 401 ETDSLRLVKILNGESDDASEVSLLMD 412
           E+DSL+ V ++N E +  +    L+D
Sbjct: 531 ESDSLQAVSMVNSEEECLAAEGGLVD 539

[Close]

BLAST of Lcy06g014180.1 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-49
Identity = 120/350 (34.29%), Postives = 184/350 (52.57%), Query Frame = 0


Query: 38   VVSYSSNWLLNDHGLQIHSFPTLSLTSRICELFS-ASGQWDEEKIWLHFTALDCDSILRI 97
            V  Y  NW+ N   L+I S P L L SR+  L     G W  + +   FT  +   IL I
Sbjct: 725  VFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSI 784

Query: 98   PLLNATADDHLIWHFEKDGLFTVKSGCRLEL--SLMIQGRPSSSDNSQWRGWWSGIWRLN 157
            P+     +D LIW++EK G+++V+SG ++ L  +  +Q  PSSS + + R WW+G W+++
Sbjct: 785  PIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMH 844

Query: 158  VLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRC 217
            + +KIK FLWRL  + LPT  N  +R ++I+N C FC  + ED +H+FW+C F + LW  
Sbjct: 845  IPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWIN 904

Query: 218  SKFESLYQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNV-----V 277
            SKF  L   L       IL +  + L+  DFE + V  W +WN  N+  +  +      +
Sbjct: 905  SKFGKLSPFL-------ILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKI 964

Query: 278  ENDLIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPE 337
              +L++WA+ Y + F      R   S+  +   +N     W+PP E   K+N +AS    
Sbjct: 965  GMELVEWANKYAMEF------REAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLAS 1024

Query: 338  TGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAG 380
                G G I+ N RG+V+ A    L     VD+AE  A + G+Q+A + G
Sbjct: 1025 DQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIG 1060

[Close]

BLAST of Lcy06g014180.1 vs. NCBI nr
Match: GAY61101.1 (hypothetical protein CUMW_207140, partial [Citrus unshiu])

HSP 1 Score: 185.7 bits (470), Expect = 8.3e-43
Identity = 112/368 (30.43%), Postives = 178/368 (48.37%), Query Frame = 0


Query: 41  YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
           + +NW+      +    PTL   + + EL +    WDEE I+ HF  +D D I +IPL  
Sbjct: 46  HKANWIPKPFTFKPVIKPTLPSKALVSELINGENCWDEELIYRHFDKMDADVITQIPLPR 105

Query: 101 ATADDHLIWHFEKDGLFTVKSGCRLELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIK 160
            + +D LIWHF K G +TVKSG +  L++     PSSS+ S  +  W+ IW L +  KI+
Sbjct: 106 RSREDELIWHFGKSGQYTVKSGYQTALNIRFPAMPSSSEFS--KNEWNIIWSLALPKKIR 165

Query: 161 FFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESL 220
            F+WR + N LP+ +N  +R +     C  C+  +E+  H    C   K +WR S F++ 
Sbjct: 166 IFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFDND 225

Query: 221 YQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVE-NDLIQWASD 280
            Q     +  S+L  VK   +  D +L     WA WN  N  ++ G       ++  A  
Sbjct: 226 IQAAPGQDILSLLHGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKRENPQSVVAKAEA 285

Query: 281 YLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEASVRPETGTVGGGFIL 340
            + +++R   S   V+              W PP E  +K+N +A+   E    G G ++
Sbjct: 286 VMEAYKRVQPSADKVAQLG-----------WNPPQEGFVKINTDAATNSEKNLAGLGAVI 345

Query: 341 RNARGEVLLATCIRLPRC-WCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNG 400
           R+  G+V  AT I++ +    V  AE  A+  G+QVA+ A      +E+DS  +V ++N 
Sbjct: 346 RDENGQV-TATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNN 399

Query: 401 ESDDASEV 407
                SE+
Sbjct: 406 RQGSRSEI 399

[Close]

BLAST of Lcy06g014180.1 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-42
Identity = 115/369 (31.17%), Postives = 179/369 (48.51%), Query Frame = 0


Query: 41   YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
            + +NW+      +    PT+   + + EL +    WDEE I+ HF  +D D I +IPL  
Sbjct: 705  HKANWIPKPFTFKPVIKPTMPSEALVSELINGENCWDEELIYKHFDKMDADVITQIPLPR 764

Query: 101  ATADDHLIWHFEKDGLFTVKSGCRLELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIK 160
               +D LIWHF K G +TVKSG +  L +     PSSS++S  +  W+ IW L +  KI+
Sbjct: 765  RLREDELIWHFGKSGQYTVKSGYQRALKIRFPAMPSSSESS--KNEWNIIWSLALPKKIR 824

Query: 161  FFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESL 220
             F+WR + N LP+ +N  +R +     C  C+  +E+  H    C   K +WR S F   
Sbjct: 825  IFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYID 884

Query: 221  YQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVE-NDLIQWASD 280
             Q     +  S+L  VK   +  D +L  V  WA WN  N  ++ G       ++  A  
Sbjct: 885  IQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEA 944

Query: 281  YLVSFQRTTTSRGVVSSCSSLSPSNRVA-CTWKPPLELDIKLNLEASVRPETGTVGGGFI 340
             + +++R   S  V     S     +VA   W PP E  +K+N +A+   E    G G +
Sbjct: 945  VMEAYKRVQPSADV-----SHGKQQKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAV 1004

Query: 341  LRNARGEVLLATCIRLPRC-WCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILN 400
            +R+  G+V  AT I++ +    V  AE  A+  G+QVA+ A      +E+DS  +V ++N
Sbjct: 1005 IRDENGQV-TATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVN 1064

Query: 401  GESDDASEV 407
                  SE+
Sbjct: 1065 NRQGSRSEI 1065

[Close]

BLAST of Lcy06g014180.1 vs. NCBI nr
Match: CAB4277970.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 124/386 (32.12%), Postives = 193/386 (50.00%), Query Frame = 0


Query: 41  YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
           Y   W+  D    I S PTL +TSR+C+LF+ASG WD  K++  F+  + ++IL IPL+ 
Sbjct: 171 YGDPWVPYDRFFTIQSIPTLPVTSRVCDLFTASGGWDVGKVFASFSFPEAEAILSIPLMG 230

Query: 101 ATADDHLIWHFEKDGLFTVKSGC-------RL-ELSLMIQGRPSSSDNSQWRGWWSGIWR 160
            T  D  IW+F K+G ++VKSG        RL ELS      PSSS    W+     +W+
Sbjct: 231 DTL-DRRIWNFTKNGRYSVKSGYWAALEYKRLEELSAGGVAGPSSSSLKSWK----HLWK 290

Query: 161 LNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLW 220
           L V  KI   LWR++ + LP+K+   RR +    +C  C A+ E  LH    C     +W
Sbjct: 291 LKVPQKIMHLLWRVAQDILPSKEVLFRRRITQGEVCCRCFAARETTLHALVGCDVCLQVW 350

Query: 221 RCSKFESLYQLLISL----NFESILWDV--KDKLAMLDFELVVVFWWAIWNLCNSLVWGG 280
           +   F S + LL +L     +   +W +   DK ++  F +     W +WN  N +++G 
Sbjct: 351 KALDFPSDF-LLPTLADVGTWMDAVWSIIPPDKQSLFAFTV-----WVLWNERNGVLFGS 410

Query: 281 NVVEND-LIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEAS 340
               +  L+Q A DY   F+R + +    +  S  SP   +   W+PP     KLN++ +
Sbjct: 411 QPTPSGILVQRAKDYDAEFKRYSAA----NHRSLSSPVRDI--KWRPPTGNCFKLNVDGA 470

Query: 341 VRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHV 400
              ETG  G G I+R++ G+++ A  +R P    V   E +AL  G+  A         +
Sbjct: 471 TDMETGARGAGAIVRDSHGKLVGALAMRAPSRISVLATELYALKIGISFALDMSLVPLEI 530

Query: 401 ETDSLRLVKILNGESDDASEVSLLMD 412
           E+DSL+ V ++N E +  +    L+D
Sbjct: 531 ESDSLQAVSMVNSEEECLAAEGGLVD 539

[Close]

BLAST of Lcy06g014180.1 vs. NCBI nr
Match: CAB4277969.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 124/386 (32.12%), Postives = 193/386 (50.00%), Query Frame = 0


Query: 41   YSSNWLLNDHGLQIHSFPTLSLTSRICELFSASGQWDEEKIWLHFTALDCDSILRIPLLN 100
            Y   W+  D    I S PTL +TSR+C+LF+ASG WD  K++  F+  + ++IL IPL+ 
Sbjct: 1321 YGDPWVPYDRFFTIQSIPTLPVTSRVCDLFTASGGWDVGKVFASFSFPEAEAILSIPLMG 1380

Query: 101  ATADDHLIWHFEKDGLFTVKSGC-------RL-ELSLMIQGRPSSSDNSQWRGWWSGIWR 160
             T  D  IW+F K+G ++VKSG        RL ELS      PSSS    W+     +W+
Sbjct: 1381 DTL-DRRIWNFTKNGRYSVKSGYWAALEYKRLEELSAGGVAGPSSSSLKSWK----HLWK 1440

Query: 161  LNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLW 220
            L V  KI   LWR++ + LP+K+   RR +    +C  C A+ E  LH    C     +W
Sbjct: 1441 LKVPQKIMHLLWRVAQDILPSKEVLFRRRITQGEVCCRCFAARETTLHALVGCDVCLQVW 1500

Query: 221  RCSKFESLYQLLISL----NFESILWDV--KDKLAMLDFELVVVFWWAIWNLCNSLVWGG 280
            +   F S + LL +L     +   +W +   DK ++  F +     W +WN  N +++G 
Sbjct: 1501 KALDFPSDF-LLPTLADVGTWMDAVWSIIPPDKQSLFAFTV-----WVLWNERNGVLFGS 1560

Query: 281  NVVEND-LIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNRVACTWKPPLELDIKLNLEAS 340
                +  L+Q A DY   F+R + +    +  S  SP   +   W+PP     KLN++ +
Sbjct: 1561 QPTPSGILVQRAKDYDAEFKRYSAA----NHRSLSSPVRDI--KWRPPTGNCFKLNVDGA 1620

Query: 341  VRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHV 400
               ETG  G G I+R++ G+++ A  +R P    V   E +AL  G+  A         +
Sbjct: 1621 TDMETGARGAGAIVRDSHGKLVGALAMRAPSRISVLATELYALKIGISFALDMSLVPLEI 1680

Query: 401  ETDSLRLVKILNGESDDASEVSLLMD 412
            E+DSL+ V ++N E +  +    L+D
Sbjct: 1681 ESDSLQAVSMVNSEEECLAAEGGLVD 1689

[Close]

BLAST of Lcy06g014180.1 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.4e-26
Identity = 104/365 (28.49%), Postives = 155/365 (42.47%), Query Frame = 0


Query: 66  ICELFSASGQ---WDEEKIWLHFTALDCDSILRIPLLNATADDHLIWHFEKDGLFTVKSG 125
           I  LF   G    WD+ KI       D   I RI L  +   D +IW++   G +TV+SG
Sbjct: 75  INNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSG 134

Query: 126 CRL-----ELSLMIQGRPSSSDNSQWRGWWSGIWRLNVLSKIKFFLWRLSNNWLPTKDNF 185
             L       ++     P  S + + R     IW L ++ K+K FLWR  +  L T +  
Sbjct: 135 YWLLTHDPSTNIPAINPPHGSIDLKTR-----IWNLPIMPKLKHFLWRALSQALATTERL 194

Query: 186 LRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKFESLYQLLISLNFE----SIL 245
             R M I   C  C    E   H  + CPF    WR S    +   L+S +FE    +IL
Sbjct: 195 TTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNIL 254

Query: 246 WDVKDKLAMLDFELVVVFW--WAIWNLCNSLVWGGNVVENDLIQWASDYLVSFQRTTTS- 305
             V+D   M DF  ++  W  W IW   N      NVV N   +  S  ++S +  T   
Sbjct: 255 NFVQD-TTMSDFHKLLPVWLIWRIWKARN------NVVFNKFRESPSKTVLSAKAETHDW 314

Query: 306 -RGVVSSCSSLSPSNRVA---CTWKPPLELDIKLNLEASVRPETGTVGGGFILRNARGEV 365
                S   + SP+ ++A     W+ P    +K N +A    +     GG+I+RN  G  
Sbjct: 315 LNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTP 374

Query: 366 LLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNGESDDASEV 412
           +    ++L        AE  ALL  +Q     G+++  +E D   L+ ++NG S  +S  
Sbjct: 375 ISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLA 427

[Close]

BLAST of Lcy06g014180.1 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-21
Identity = 90/360 (25.00%), Postives = 156/360 (43.33%), Query Frame = 0


Query: 57  FPTLSLTSRICELFSASG-QWDEEKIWLHFTALDCDSILRIPLLNATADDHLIWHFEKDG 116
           + ++S   ++ +L   SG +W ++ I + F  ++   I  +        D   W +   G
Sbjct: 162 YASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSG 221

Query: 117 LFTVKSGCRLELSLMIQGRPSSSDNSQ--WRGWWSGIWRLNVLSKIKFFLWRLSNNWLPT 176
            +TVKSG  + L+ +I  R S  + S+      +  IW+     KI+ FLW+  +N LP 
Sbjct: 222 DYTVKSGYWV-LTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPV 281

Query: 177 KDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVKYLWRCSKF---------ESLYQLL 236
                 R +   + C+ C +  E   H+ + C F +  W  S           +S+Y  L
Sbjct: 282 AGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNL 341

Query: 237 ---ISLNFESILWDVKDKLAMLDFELVVVFWWAIWNLCNSLVWGGNVVE-NDLIQWASDY 296
               +L   +  W+          +LV    W +W   N LV+ G      ++++ A D 
Sbjct: 342 YWVFNLGNGNPQWEKAS-------QLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDD 401

Query: 297 LVSFQRTTTSRGVVSSCSSLSPSNRVAC-TWKPPLELDIKLNLEASVRPETGTVGGGFIL 356
           L  ++  T +     SC +    NR +C  W+PP    +K N +A+   +    G G++L
Sbjct: 402 LEEWRIRTEA----ESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVL 461

Query: 357 RNARGEVLLATCIRLPRCWCVDVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNGE 400
           RN +GEV       LP+   V  AE  A+   V    +  ++    E+DS  L++ILN +
Sbjct: 462 RNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND 509

[Close]

BLAST of Lcy06g014180.1 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-17
Identity = 74/291 (25.43%), Postives = 119/291 (40.89%), Query Frame = 0


Query: 131 IQGRPSSSDNSQWRGWWSGIWRLNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVF 190
           IQ  P S++  Q       IW+L+V  KIK FLWR     L T      R +D   +C  
Sbjct: 24  IQPPPGSTEVKQ------AIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQR 83

Query: 191 CQASVEDCLHVFWVCPFVKYLWRCSKFESLYQLLISLNFE---SILWDVKDKLAMLDFEL 250
           C    E   H+ + CP+ + +WR +      Q     +FE   + L  +         + 
Sbjct: 84  CCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDR 143

Query: 251 VVVFW--WAIWNLCNSLVWGGNVVENDL-----IQWASDYLVSFQRTTTSRGVVSSCSSL 310
            + FW  W +W   N  ++       D      IQ A+++L +   TT +  V  + + +
Sbjct: 144 FLPFWIMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWL-NANETTENTNVHVATNPI 203

Query: 311 SPSNRVACTWKPPLELDIKLNLEASVRPETGTVGGGFILRNARGEVLLATCIRLPRCWCV 370
             S R +  W PP E  +K N ++     +     G+ +R   G ++L    +L    C 
Sbjct: 204 QTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCS 263

Query: 371 DVAEGWALLTGVQVARQAGFSKFHVETDSLRLVKILNGESDDASEVSLLMD 412
             AE    L  +QV    G      E+DS  LV ++N   D +   +L+ D
Sbjct: 264 LHAEALGFLHALQVIWAHGLRYVWFESDSKSLVTLINNGEDHSLLGTLIYD 307

[Close]

BLAST of Lcy06g014180.1 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.7e-12
Identity = 69/270 (25.56%), Postives = 117/270 (43.33%), Query Frame = 0


Query: 150 IWRLNVLSKIKFFLWRLSNNWLPTKDNFLRRVMDISNLCVFCQASVEDCLHVFWVCPFVK 209
           IW+L    KIK FLW+L +  L T DN  RR +     C  C    E   H+F+ C + +
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 210 YLWRCS------------KFESLYQLLISLNFESILWDVKDKLAMLDFELVVVFWWAIWN 269
            +WR S              E+  +LL+S    S L + + +L    F L +   W +W 
Sbjct: 78  QVWRASGIPHQELRTTGITMETKMELLLS----SCLANRQPQL----FNLAIWILWRLWK 137

Query: 270 LCNSLVWGGNVVE-NDLIQWASDYLVSFQRTTTSRGVVSSCSSLSPSNR------VACTW 329
             N LV+    +   + +Q A + +  ++ T T    V S +    S+R          W
Sbjct: 138 SRNQLVFQQKSISWQNTLQRARNDVQEWEDTNT---YVQSLNQQVHSSRHQQPTMARTKW 197

Query: 330 KPPLELDIKLNLEASVRPETGTVGGGFILRNARGEVLLATCIRLPRCWCVDV-AEGWALL 389
           + P    IK N + +   +T     G+++R+  G V + +   +       + +E  AL+
Sbjct: 198 QRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENG-VYMGSGQAIGSTTSDSLESEFQALI 257

Query: 390 TGVQVARQAGFSKFHVETDSLRLVKILNGE 400
             +Q A   G+ K   E DS ++ +++N E
Sbjct: 258 IAMQHAWSQGYRKVIFEGDSKQVEELMNNE 275

The following BLAST results are available for this feature:

BLAST of Lcy06g014180.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g014180.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	2.2e-49	34.29	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A2H5Q972	4.0e-43	30.43	Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_207140 PE=4...	[more]
A0A1S8AC01	2.0e-42	29.97	Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1	[more]
A0A6J5UN51	5.8e-42	32.12	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UN24	5.8e-42	32.12	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS28123 PE=4 S...	[more]

BLAST of Lcy06g014180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	4.5e-49	34.29	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
GAY61101.1	8.3e-43	30.43	hypothetical protein CUMW_207140, partial [Citrus unshiu]	[more]
XP_024956542.1	1.8e-42	31.17	uncharacterized protein LOC112498908 [Citrus sinensis]	[more]
CAB4277970.1	1.2e-41	32.12	unnamed protein product [Prunus armeniaca]	[more]
CAB4277969.1	1.2e-41	32.12	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lcy06g014180.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	4.4e-26	28.49	Ribonuclease H-like superfamily protein	[more]
AT4G29090.1	1.1e-21	25.00	Ribonuclease H-like superfamily protein	[more]
AT2G02650.1	1.3e-17	25.43	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	4.7e-12	25.56	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 144..212 e-value: 3.9E-16 score: 59.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 317..408 e-value: 6.7E-6 score: 28.2
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 323..409 e-value: 8.8E-17 score: 61.1
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 76..400
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 76..400
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 320..400 e-value: 9.94858E-10 score: 54.2424
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 318..398

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g014180	Lcy06g014180	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g014180.1.exon1	Lcy06g014180.1.exon1	exon
Lcy06g014180.1.exon2	Lcy06g014180.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g014180.1.cds1	Lcy06g014180.1.cds1	CDS
Lcy06g014180.1.cds2	Lcy06g014180.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g014180.1	Lcy06g014180.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity