Lcy03g019050.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy03g019050.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UPF0057 membrane protein
Location	Chr03: 52653341 .. 52653674 (-)
Sequence length	228
RNA-Seq Expression	Lcy03g019050.1
Synteny	Lcy03g019050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGCACAGTAGGTTTCTGATTCTTTTCCTCTTTTGTGTTGATCTTGCATTTACTCTCATTAATTTATCATTAATCGAATGGATTCTGATCTACGATTCCTTGTGGTTGTGCAGGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATATAGGCGTCCTCTTTACGCGCCGGCCTAG

mRNA sequence

ATGCCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATATAGGCGTCCTCTTTACGCGCCGGCCTAG

Coding sequence (CDS)

ATGCCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGCACAGTTGAGTTTTGCATATGCCTTCTTTTGACGATTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATTGATCGCGATGAGTACTTCGATGAATATAGGCGTCCTCTTTACGCGCCGGCCTAG

Protein sequence

MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

Homology

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.2e-28
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+ CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-27
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M + CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-20
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M +  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-19
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDRDEY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLTILGYVPGIIYA+Y +V +D D+Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 8  FCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAI 56
          F +I+IAIL+PPLGV LR G C VEF ICL+LT+LGY+PGIIYA+Y +
Sbjct: 6  FVDIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL
Match: A0A2H5P874 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPTRCEIFCEILIA+L+PP+GVCLRHGCC+VEFCICLLLTILGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILIAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAP 75
          DEYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL
Match: A0A067F037 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034455mg PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 68/74 (91.89%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPTRCEIFCEIL+A+L+PP+GVCLRHGCC+VEFCICLLLTILGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILLAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAP 75
          DEYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL
Match: V4UR64 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010088mg PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 68/74 (91.89%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPTRCEIFCEIL+A+L+PP+GVCLRHGCC+VEFCICLLLTILGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILLAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAP 75
          DEYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Lcy03g019050.1 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Lcy03g019050.1 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 3.7e-34
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Lcy03g019050.1 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Lcy03g019050.1 vs. NCBI nr
Match: XP_006474017.1 (UPF0057 membrane protein At4g30660 isoform X2 [Citrus sinensis] >GAY48559.1 hypothetical protein CUMW_112610 [Citrus unshiu])

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 69/74 (93.24%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPTRCEIFCEILIA+L+PP+GVCLRHGCC+VEFCICLLLTILGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILIAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAP 75
          DEYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Lcy03g019050.1 vs. NCBI nr
Match: XP_006453590.1 (UPF0057 membrane protein At4g30660 isoform X1 [Citrus clementina] >ESR66830.1 hypothetical protein CICLE_v10010088mg [Citrus clementina] >KDO59495.1 hypothetical protein CISIN_1g034455mg [Citrus sinensis])

HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33
Identity = 68/74 (91.89%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MPTRCEIFCEIL+A+L+PP+GVCLRHGCC+VEFCICLLLTILGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILLAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAP 75
          DEYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

[Close]

BLAST of Lcy03g019050.1 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 5.9e-30
Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M   CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT+LGYVPGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DEYFDEYRRPLY 73
          D++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Lcy03g019050.1 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-29
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+ CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Lcy03g019050.1 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-29
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          MP+ CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Lcy03g019050.1 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-28
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M + CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Lcy03g019050.1 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-21
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MPTRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60
          M +  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Lcy03g019050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI0	4.2e-28	78.08	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
O82232	2.7e-27	76.39	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9M095	4.2e-20	75.41	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	6.0e-19	70.31	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
Q9ZNQ7	3.9e-10	68.75	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]

BLAST of Lcy03g019050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9R0	1.8e-34	97.33	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ...	[more]
A0A0A0LTR2	6.9e-34	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1	[more]
A0A2H5P874	1.2e-33	93.24	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=3 SV=1	[more]
A0A067F037	2.0e-33	91.89	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034455mg PE=3 SV=1	[more]
V4UR64	2.0e-33	91.89	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010088mg PE=3 ...	[more]

BLAST of Lcy03g019050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879686.1	1.3e-34	98.67	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_008443846.1	3.7e-34	97.33	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_004146673.1	1.4e-33	96.00	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr...	[more]
XP_006474017.1	2.4e-33	93.24	UPF0057 membrane protein At4g30660 isoform X2 [Citrus sinensis] >GAY48559.1 hypo...	[more]
XP_006453590.1	4.1e-33	91.89	UPF0057 membrane protein At4g30660 isoform X1 [Citrus clementina] >ESR66830.1 hy...	[more]

BLAST of Lcy03g019050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	5.9e-30	80.56	Low temperature and salt responsive protein family	[more]
AT4G30660.1	3.0e-29	78.08	Low temperature and salt responsive protein family	[more]
AT4G30660.2	3.0e-29	78.08	Low temperature and salt responsive protein family	[more]
AT2G24040.1	1.9e-28	76.39	Low temperature and salt responsive protein family	[more]
AT4G30650.1	3.0e-21	75.41	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..56 e-value: 6.4E-17 score: 61.5
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy03g019050	Lcy03g019050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy03g019050.1.exon2	Lcy03g019050.1.exon2	exon
Lcy03g019050.1.exon1	Lcy03g019050.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy03g019050.1.cds2	Lcy03g019050.1.cds2	CDS
Lcy03g019050.1.cds1	Lcy03g019050.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy03g019050.1	Lcy03g019050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane