Lag0040265.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040265.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic
Location	chr13: 3435284 .. 3437495 (+)
Sequence length	480
RNA-Seq Expression	Lag0040265.1
Synteny	Lag0040265.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTGCGATTTGCGGGAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGGTACTGGTTTTATTTCACTCTTTTTCTTCATTATCAATTATCAATCGTTTTATCGTCTTCGGTTTTACTGATTTTGATCCGCCATTACTGATTCCTTGAGAAATCCCACGTTACATCATCCTTATTATCTATCTTATTTTCCGGGTGGGGTTGACTTCATTTCTGGGTTTTAATGTTTTAATCCCAACTAAACTTGATATCTGAACAAGTTTATTAGCTTTTACTAAGATATTTGATTATCTCAATTGATCGCTGAAATTTTTATGCTTGTGCCATGCTGCCATGCTTATCTGTTTGCGTTGGCTAATTGGAATAATTTGATGGAGAGGGACCAGCAATTGTAAGGAATGTACCTTAAGACCAAAAAGTGCAACGTTTTTGGTGGAAAAAGATTTTCTCTGTGTATGCAGATATCTTTAATGGATTATATCCCATTGTTCCAGAATCTTCTGTTCTGTGGCGTCTTCCTTATGTTAGATTTATAAAAGAATCGATCACCTTTTTTGATCCTAGTGTGGTCTATAAGCTGCCTAGCATATGGTATCCCACTTCAATTTCTCATGTTATGGCTATTCTTCTATCATTCTTTTTCTTTGTACTTTGCTTTATATGCTTTTGTTTTTTGGTTCCATATTCTCTTTTGCTTATGGCTTAGTTGTCAATCACGTTGGAAGCTCCATTGTTTCTTGCTATGAATTGATTTACTTTCTATTCTTTTTAAGATTAAGATTACTTTTATTACTTTATTGATTCCATTGCTTTATTTGTTTTGTTATATTTATATGATTAGATTCTTCTCATTTTTCAACTTTAGCTTATTTTTCAAAGTGCAGCATTATGACTGGATTAGCAATGGATAATATTAGCTTCTTATAAAAGTTTCATTTCAGGGGACAGAAATTCTGTGTGTAAAGGGCTATGCTCAAACTTTGGTGCATCGGTTGTTAAATCAGCAACAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGGCCTGTTATTGAGAAAGCTACTCCAGGAAGAGAATCTGAGTTTGATTTGAGGTATTAAACATTAGACCGTACAGTTATGTATTGAAAAGAGTACAATATACTGAACTAGAAAAGGGGACAAAGAAAGAATAAAGTATACCAGTTAAAGACCTTAAAGAGATGGACAGATTCTGGTGTAGGGTCATCTGATCTGAAGACCAACGGTTAGATAGTTTTTCACTAATCTTTACAATTTGAATTCTAAATCAGGACTACTACTCTTGTGCAATGCGTCTCTTTATTTTTCATTTGTTTGATTTTTGCTATTAACTTTACATGTATGTATCGCTTGGTGTCACCAAATACCTTAGATGATTTTAGAGACAGGGTAATCTTATCAGCTACATATGCCATGTTGAACTATGCATTGGAACACACAAAAATCAAAGCATCTTTATTTATATGAAACTTAGCATTACTTTTTGGAGTTGGTCTTTGTTCTTGTACCTTTACCGACTGTCATTGACTAAATACATTGACTTTTGTATTGGGAATACTAAATGATCGGCATTAAAAGGATTGTAGTTGAAGTAAAGTGGGAAAAGGAAATGGTATGGTATGAGCCTGCAGAATTGCAACCGATGGAAAATCACTGATTTTTTCTTTCTTGACTGTACAGATAAAACCAATAGCTAAGTTCTTGCGACTTGGGCAGACTTTTGGTTATTAGCAGATGTTGAAGTTAGATTTGAAAATTTGATTGTACAACTTGATTCTGAGTGAATGGGCGCTGACTTTATTGTTCTCAGTTGGATAGTTCTTTTTCATAGAACAAAAGAGCAGATATGAACTGATCATTATGTATCTTATCTAAAAAAAAGAACTGATCATTATGTATCAATGATATTGTTCAGGAGATCAAGGAAAATGACGCCCCCATATCGTGTCATTCTGCATAATGACGACTTCAATAAACGAGAATACGTCGTTCAAGTCTTGATGAAAGTCATCCCCGGAATGACACTTGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCACTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAGCTCAGAGGCAATGGGCTGTTAAGTTCAATTGAACCTGCTAGTGGTGGGTGCTGTTAA

mRNA sequence

ATGGAGATTGCGATTTGCGGGAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGGGGACAGAAATTCTGTGTGTAAAGGGCTATGCTCAAACTTTGGTGCATCGGTTGTTAAATCAGCAACAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGGCCTGTTATTGAGAAAGCTACTCCAGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAATGACGCCCCCATATCGTGTCATTCTGCATAATGACGACTTCAATAAACGAGAATACGTCGTTCAAGTCTTGATGAAAGTCATCCCCGGAATGACACTTGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCACTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAGCTCAGAGGCAATGGGCTGTTAAGTTCAATTGAACCTGCTAGTGGTGGGTGCTGTTAA

Coding sequence (CDS)

ATGGAGATTGCGATTTGCGGGAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGGGGACAGAAATTCTGTGTGTAAAGGGCTATGCTCAAACTTTGGTGCATCGGTTGTTAAATCAGCAACAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGGCCTGTTATTGAGAAAGCTACTCCAGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAATGACGCCCCCATATCGTGTCATTCTGCATAATGACGACTTCAATAAACGAGAATACGTCGTTCAAGTCTTGATGAAAGTCATCCCCGGAATGACACTTGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCACTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAGCTCAGAGGCAATGGGCTGTTAAGTTCAATTGAACCTGCTAGTGGTGGGTGCTGTTAA

Protein sequence

MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC

Homology

[Close]

BLAST of Lag0040265.1 vs. NCBI nr
Match: XP_038891525.1 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGRGGGLLERPVIEK 60
           MEIAICGKLALSPNHVFNPKPGDR+SVCKGLCSNFGASVVKSA TAGRGGGLLERPVIEK
Sbjct: 1   MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNFGASVVKSAPTAGRGGGLLERPVIEK 60

Query: 61  ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120
           ATPGRESEFDLR+SRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  ATPGRESEFDLRKSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160
            NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Sbjct: 121 CNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 159

[Close]

BLAST of Lag0040265.1 vs. NCBI nr
Match: XP_008446565.1 (PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo] >KAA0034534.1 ATP-dependent Clp protease adapter protein CLPS1 [Cucumis melo var. makuwa] >TYK09088.1 ATP-dependent Clp protease adapter protein CLPS1 [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 7.1e-83
Identity = 153/159 (96.23%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGRGGGLLERPVIEK 60
           MEIAICGKLA+SPNHVFNPKPGDR+S+CKGLC NFGASVVKSA TAGRGGGLLERPVIEK
Sbjct: 1   MEIAICGKLAVSPNHVFNPKPGDRSSMCKGLCFNFGASVVKSAATAGRGGGLLERPVIEK 60

Query: 61  ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120
           ATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  ATPGRESEFDMRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160
           YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Sbjct: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 159

[Close]

BLAST of Lag0040265.1 vs. NCBI nr
Match: XP_011655763.1 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-81
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGRGGGLLERPVIEK 60
           MEIAI GKLALSPNHVFNPKPGDR+SVCKGLC NFGASVVKSA TAGRGGGLLERPVIEK
Sbjct: 1   MEIAIRGKLALSPNHVFNPKPGDRSSVCKGLCFNFGASVVKSAATAGRGGGLLERPVIEK 60

Query: 61  ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120
           ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160
           YNGLSLVIICAQADAE HCMQLRGNGLLSSIEPASGGCC
Sbjct: 121 YNGLSLVIICAQADAEGHCMQLRGNGLLSSIEPASGGCC 159

[Close]

BLAST of Lag0040265.1 vs. NCBI nr
Match: XP_022150471.1 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica charantia])

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 149/159 (93.71%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGRGGGLLERPVIEK 60
           MEIAICGKLALSPNHVFNP+PGD+N VC+GLCS+ GA++VKSATTAG+GGGLLERPVIEK
Sbjct: 1   MEIAICGKLALSPNHVFNPQPGDKNCVCRGLCSSLGAAIVKSATTAGKGGGLLERPVIEK 60

Query: 61  ATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120
           ATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  ATPGRESEFDLRRSRKTTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160
           YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Sbjct: 121 YNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 159

[Close]

BLAST of Lag0040265.1 vs. NCBI nr
Match: XP_022968529.1 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 3.6e-79
Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTAGR-GGGLLERPVIE 60
           MEIAICGKLALSPNHVFNPKPGDR+SVCKGLCS   ASVVKSATTAGR GGGLLERPVIE
Sbjct: 1   MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSTLCASVVKSATTAGRGGGGLLERPVIE 60

Query: 61  KATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA 120
           KATPGRESEFDLRRSRK TPPYRVILHNDDFN+REYVVQVLMKVIPGMTLDNAVNIMQEA
Sbjct: 61  KATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEA 120

Query: 121 HYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160
           H NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC
Sbjct: 121 HCNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGCC 160

[Close]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot
Match: Q9SX29 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPLS1 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 114/159 (71.70%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MEIAICGKLALSPNHVFNPKPGDRNSVCKGLCSNFGASVVKSATTA-GRGGGLLERPVIE 60
           ME AICG+LAL+P+ +FN K GD++ V KG C N    +  S + A G+GGG+L++P+IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60

Query: 61  KATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA 120
           K TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQVLMKVIPGMT+DNAVNIMQEA
Sbjct: 61  KTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQEA 120

Query: 121 HYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 159
           H NGL++VI+CAQADAE+HCMQLRGNGLLSS+EP  GGC
Sbjct: 121 HINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159

[Close]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot
Match: A0A2K3CNL6 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CLPS1 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 56/130 (43.08%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 29  KGLCSNFGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHND 88
           +G    F     ++       GG+++ P     T  ++    + RS+K  P Y+V+LHND
Sbjct: 40  QGAFGTFAPQTTRTFVVTWAKGGVMDAP-----TTTQQPASGVERSQKRPPIYKVLLHND 99

Query: 89  DFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLL 148
           ++NKREYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+ C Q +AE +C  LR NGL 
Sbjct: 100 NYNKREYVVKVLLKVVEQITVDDAVTCMQEAHETGVALVVACPQDNAERYCEGLRLNGLT 159

Query: 149 SSIEPASGGC 159
           S+IEP  GGC
Sbjct: 160 STIEP--GGC 162

[Close]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot
Match: Q31QE7 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpS PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-19
Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 75  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQAD 134
           RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    
Sbjct: 15  RKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEP 74

Query: 135 AEEHCMQLRGNGLLSSIEP 154
           AE +C QL+ +GL SSIEP
Sbjct: 75  AEFYCEQLKSHGLSSSIEP 93

[Close]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot
Match: Q5N3U1 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpS PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 75  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQAD 134
           RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    
Sbjct: 15  RKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEP 74

Query: 135 AEEHCMQLRGNGL 148
           AE +C QL+ +GL
Sbjct: 75  AEFYCEQLKSHGL 87

[Close]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot
Match: Q3AUR5 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpS PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-14
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 62  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEA 121
           +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EA
Sbjct: 9   SPGGAAVLDKAPERVRKRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQDAMAVMLEA 68

Query: 122 HYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP 154
           H  G+ LVI+C    AE +C  L+  GL SSIEP
Sbjct: 69  HNTGVGLVIVCDIEPAEFYCETLKSKGLTSSIEP 102

The following BLAST results are available for this feature:

BLAST of Lag0040265.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891525.1	5.4e-83	97.48	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 ...	[more]
XP_008446565.1	7.1e-83	96.23	PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like ...	[more]
XP_011655763.1	1.3e-81	96.86	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus...	[more]
XP_022150471.1	3.9e-81	93.71	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica chara...	[more]
XP_022968529.1	3.6e-79	95.00	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita ...	[more]

BLAST of Lag0040265.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX29	1.1e-62	71.70	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Arabidopsis t...	[more]
A0A2K3CNL6	1.9e-22	43.08	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Chlamydomonas...	[more]
Q31QE7	2.6e-19	59.49	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (stra...	[more]
Q5N3U1	1.2e-16	57.53	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain ATC...	[more]
Q3AUR5	3.3e-14	43.62	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain CC9...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	GENE3D	3.30.1390.10		coord: 75..153 e-value: 1.8E-21 score: 77.8
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	SUPERFAMILY	54736	ClpS-like	coord: 75..153
IPR003769	Adaptor protein ClpS, core	PFAM	PF02617	ClpS	coord: 78..144 e-value: 1.2E-18 score: 66.6
None	No IPR available	PANTHER	PTHR33473:SF15	BNAA07G24510D PROTEIN	coord: 1..158
IPR022935	ATP-dependent Clp protease adaptor protein ClpS	PANTHER	PTHR33473	ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC	coord: 1..158
IPR022935	ATP-dependent Clp protease adaptor protein ClpS	HAMAP	MF_00302	ClpS	coord: 61..155 score: 15.030427

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0040265	Lag0040265	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0040265.1.exon1	Lag0040265.1.exon1	exon
Lag0040265.1.exon2	Lag0040265.1.exon2	exon
Lag0040265.1.exon3	Lag0040265.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0040265.1	cds.Lag0040265.1	CDS
cds.Lag0040265.1	cds.Lag0040265.1_2	CDS
cds.Lag0040265.1	cds.Lag0040265.1_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0040265.1	Lag0040265.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008233	peptidase activity