Lag0040209.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0040209.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr13: 2907826 .. 2908919 (+)
Sequence length594
RNA-Seq ExpressionLag0040209.1
SyntenyLag0040209.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAGGTTGATGCTCTTTCTCATGTGTGCTACATGTCTGTGGCTGACATCAGTCCTAAGCAATGGAAGCAATCTTCAACTCATGGAAATCAGGAGGCAAGTGAAGTTTGCTTCCTGAAGGAGACAAGCCTGACCCAAGGTCAAGCTGGTCAAGCTGGTCAAGGTCAGTGCTGACCAGCTACTTGTACATATAATACTCCAACCATCGGTACTCTATATACATCTTGGAACTTGGAAGTTCATCTACCATTCACATATTCAACTTTGAAAGACTTAAGAAATAAAGAAATGCTGCATTTGGGAGCTACAGAGTTTCTACCTTCATGGTGCAATGATCCAGACTAAAGTTCAGATGTACTGCAACCAATCAGGGCTTCAGCAATGCTGAGAGACATGGCTTTCAAAGGGATCGACGAAGGTATTCGTCAGTGTACGCTTGTTAACTTGAAGAGAGATCCATGGACATCCTCCGTGGTTTTGGATTGCTGGAAACTCACTGATAACTCCCAAAGATCAGCTGGAGTGTTGTCATGTAGTCATAATTTTTATTTATTGCATATTGTTTGTATGTACAAGGAAAGTATTGCCGGCGGGTCTTTTTTGGTTTCATCCACCATTTCAAGGAAGAAGCAAAATAGCTACTTTTGTTGTCAAATTATGGAATATTCTAAATCAACTTTGGCAGATAATCTCAAGTTTTGGGCAGATCAGGCCATGTGCCGTACCTGCTATTGCAAGAATTCAAGAAGTTCCGATGATGTAACAAACTTTCTAGAAAAGGTCATAAATTGTCGTTGGAATGCATCAAATCTCCTCTACCTAATAGGTAAAAATGCAAAAGTTGACCCTCTAGTAGAATCATGTTTGGTTTGTTTCTGATCAACAGATTGACCGAGATCACTGGCTCGTCTAGATGTTTCAAATTTTCCTTTATTTAGCTACTGATCATAACCTGCCTAGACTTCAAAAGGTTTTGGAACTTGTTGAAGGCCGAAGAACTTGCTGTTTATGAGAATCTATCTTGTGAAGTTTGCATGACTTCAAGGTTTGGAATTCATAAATCAAAAGTGAAACCAACCTTGTTCAGCTAG

mRNA sequence

ATGCTTCAGGTTGATGCTCTTTCTCATGTGTGCTACATGTCTGTGGCTGACATCAGTCCTAAGCAATGGAAGCAATCTTCAACTCATGGAAATCAGGAGGCAAGTGAAGTTTGCTTCCTGAAGGAGACAAGCCTGACCCAAGGTCAAGCTGGTCAAGCTGGTCAAGATGTACTGCAACCAATCAGGGCTTCAGCAATGCTGAGAGACATGGCTTTCAAAGGGATCGACGAAGGTATTCGTCAGTGTACGCTTGTTAACTTGAAGAGAGATCCATGGACATCCTCCGTGGTTTTGGATTGCTGGAAACTCACTGATAACTCCCAAAGATCAGCTGGAGTGTTGTCATATAATCTCAAGTTTTGGGCAGATCAGGCCATGTGCCGTACCTGCTATTGCAAGAATTCAAGAAGTTCCGATGATGTAACAAACTTTCTAGAAAAGCTACTGATCATAACCTGCCTAGACTTCAAAAGGTTTTGGAACTTGTTGAAGGCCGAAGAACTTGCTGTTTATGAGAATCTATCTTGTGAAGTTTGCATGACTTCAAGGTTTGGAATTCATAAATCAAAAGTGAAACCAACCTTGTTCAGCTAG

Coding sequence (CDS)

ATGCTTCAGGTTGATGCTCTTTCTCATGTGTGCTACATGTCTGTGGCTGACATCAGTCCTAAGCAATGGAAGCAATCTTCAACTCATGGAAATCAGGAGGCAAGTGAAGTTTGCTTCCTGAAGGAGACAAGCCTGACCCAAGGTCAAGCTGGTCAAGCTGGTCAAGATGTACTGCAACCAATCAGGGCTTCAGCAATGCTGAGAGACATGGCTTTCAAAGGGATCGACGAAGGTATTCGTCAGTGTACGCTTGTTAACTTGAAGAGAGATCCATGGACATCCTCCGTGGTTTTGGATTGCTGGAAACTCACTGATAACTCCCAAAGATCAGCTGGAGTGTTGTCATATAATCTCAAGTTTTGGGCAGATCAGGCCATGTGCCGTACCTGCTATTGCAAGAATTCAAGAAGTTCCGATGATGTAACAAACTTTCTAGAAAAGCTACTGATCATAACCTGCCTAGACTTCAAAAGGTTTTGGAACTTGTTGAAGGCCGAAGAACTTGCTGTTTATGAGAATCTATCTTGTGAAGTTTGCATGACTTCAAGGTTTGGAATTCATAAATCAAAAGTGAAACCAACCTTGTTCAGCTAG

Protein sequence

MLQVDALSHVCYMSVADISPKQWKQSSTHGNQEASEVCFLKETSLTQGQAGQAGQDVLQPIRASAMLRDMAFKGIDEGIRQCTLVNLKRDPWTSSVVLDCWKLTDNSQRSAGVLSYNLKFWADQAMCRTCYCKNSRSSDDVTNFLEKLLIITCLDFKRFWNLLKAEELAVYENLSCEVCMTSRFGIHKSKVKPTLFS
Homology
The following BLAST results are available for this feature:
BLAST of Lag0040209.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0040209.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0040209.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0040209Lag0040209gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0040209.1.exon1Lag0040209.1.exon1exon
Lag0040209.1.exon2Lag0040209.1.exon2exon
Lag0040209.1.exon3Lag0040209.1.exon3exon
Lag0040209.1.exon4Lag0040209.1.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0040209.1cds.Lag0040209.1CDS
cds.Lag0040209.1cds.Lag0040209.1_2CDS
cds.Lag0040209.1cds.Lag0040209.1_3CDS
cds.Lag0040209.1cds.Lag0040209.1_4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0040209.1Lag0040209.1-proteinpolypeptide