Lag0038489.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0038489.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 18566085 .. 18568277 (-)
Sequence length501
RNA-Seq ExpressionLag0038489.1
SyntenyLag0038489.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCTTTAGCTCAGAGGTTGACTATTACTAGAAGGCCAATGAGAAAAAGAAACACCCCAGCAGAAAAAATCGATTGCAAATCATTTAATGCCAAATGACACGCATAAGCAAAGAATGATTATGAAACAGAAAACTAGTGATGCGAAGGGAAAAATCATTCAATTGATTATTTGCCACCTTTCAATTCTCCCATGGCTGCCATTCATGAAATCTCATTACCCAAGTCAATGCATACACAAAAATAGATGAAAACAATTATTTTTGCCAACTTTTAGTTCTCCTTTCAACTTTCTTAGACCATAGACAAAATAGATGAAAATGGTAACATTTTTAAAGGCACATCAACTTTACCCAAGGTGTTTCAGGTCGCCGCCATTCGTGAGGTCGCCGCCATTCGTGAAGAGAATTTGTGTGTGAGGTCGTCCGCGAACACAGAACAGAGAGTGAAGCCGGAGGTTCGCAAGTGTCTTGTCGTTGTCTACGGGTATATGAAGTTGTTCGTCGCCGTTGAGTTTCTAATCACCAGATTTTGGGTGTTTGTGTTGCCGCCGTCGTGGTTCGCGAGTGAAGGTCGTCAGATATCTCGTGTCGCCGGAGTCTGGGTGTCTCGCGAGTGAAGGCGTCTGGGTGTCGCAAGTGAAGACCTCAAGTTATCGGATGTCTCGTGTCGCTGGCGTCTAGGAAGGTTGCGAAGGTTCGCCGTCGTGGGTGTCGCGTTGCCGTTGCCGGATGTCTCTTCGCCAGCGTCTGGGAGTCTATGAATGTTACTTCACCCAAGAAGAACGGTGGTGTGCGGCGTCTGATTGATTTTCGCGAGAGGGAGGTGAGAATAAATACTGAAAAAGCCCTAATTTTGAAAAAGCCCTTTATTAAATTAAAAGAAATTTCATTATTCTTGACATTTTTAAAATATCAAGTCTTCCTTAGCGTGAAAAAATCTGAAAAAAAAAATCATAAAACTCCGTGTTTTTGTATTTTTCTTGACGTTTTTTTGTTAAAATTACATAAGTCTTGACATTTTTTTTGTTAAAACTCATAAGTCTTGACATTTTTTTTTTAAAAAATGTCAACTAATTAAAAAACCCAAATGTCAAGTAACACTATTTATTTGAGTATATGTTATTCATACTTTAAATCTTAATTCTCTTGCTTATATTATTTTCATTTCTTCTTATCTATTAGTTCAAATTCTCTACATTAACGGTTTCAAGTATAAGTTTCATCATGTTGAATCGTACTTCAAAGAGTTATGAGGTTTTTTTTTTCGATTGATAATATTGTATAAAAACACCACGATGTTATGAAAATTATATGTAACTTGTTGTGCATTTTTCTAAAGAAAACCGTGTTATACCAATTTTGTAAGACTTTGGATTTTGATAACTGTAGATATTTTAAGAATATATATTCTAGACTTATTTATGATGCTGCTTTAAAGACATACATCTTCGTTAATTTTATTATAAGATTTATCATATTGGAATTGGTTTTTTTTTTTTTTACAATAACCAATAACTTTTGGTGAGGCATTACGGTGTCGCTAAAAGTCCTCTTCATTATATTGAACTTCACTTTTAGTGACACATTATGGCATCGCTAAAAGTTCTCCATCGAAACTTCTTCACTTTTAGTGATACATTACAACGTCGCTAAAAATACTCTTTAGTGACACATGTGCGTCGCTGAATGGTAAGTTTTAGTGACATATGGTATACGTGTCGCTAAAACTTACGAAGACGTGGCTTTAACGACGGATGCAACATCGAAGTTCAATGCGTCGATAAAACATTTAGCGATGTTTTTAGACTTTTAGCAACGTTTTTATTGCGTCACTAAAAGGGATTTTTCTTGTAGTATTGGATTGCTATGTCATATCAATTTATGTCTTTTTTATGGTTGAACAAATACAATTGATTTTAAAATGAATGAGATAGAAATAGTTGGATATGTTGATGCTAATTATGTTGTTGATGTTGTTAAGTGTGGATCTTGGACTGATTTTGTGTTTAAGCTTTTATGTTGTACAATCAACTATCTAATTTACAATCCATAGTTGCATTATCTACAAGTTAATCTGAATATGTTGCTTTAACTGAAGCTATTAAGGAATCTTTTATGGTTTAAGGGAACTGTATCTGAATTATGTTGTAATGGTAATGTTTCTAGAACTGCGTTATGTGATAGTTAA

mRNA sequence

ATGATCAGCTTTAGCTCAGAGGTCGCCGCCATTCGTGAGGTCGCCGCCATTCGTGAAGAGAATTTGTGTGTGAGGTCGTCCGCGAACACAGAACAGAGAGTGAAGCCGGAGGTTCGCAAGTGTCTTGTCGTTGTCTACGGGTATATGAAGTTGTTCGTCGCCGTTGAGTTTCTAATCACCAGATTTTGGGTGTTTGTGTTGCCGCCGTCGTGGTTCGCGAGTGAAGGTCGTCAGATATCTCGTGTCGCCGGAGTCTGGGTGTCTCGCGAGAAGGTTGCGAAGGTTCGCCGTCGTGGGTGTCGCGTTGCCGTTGCCGGATGTCTCTTCGCCAGCGTCTGGGAGTCTATGAATGTTACTTCACCCAAGAAGAACGGTGGTGTGCGGCGTCTGATTGATTTTCGCGAGAGGGAGCTATTAAGGAATCTTTTATGGTTTAAGGGAACTGTATCTGAATTATGTTGTAATGGTAATGTTTCTAGAACTGCGTTATGTGATAGTTAA

Coding sequence (CDS)

ATGATCAGCTTTAGCTCAGAGGTCGCCGCCATTCGTGAGGTCGCCGCCATTCGTGAAGAGAATTTGTGTGTGAGGTCGTCCGCGAACACAGAACAGAGAGTGAAGCCGGAGGTTCGCAAGTGTCTTGTCGTTGTCTACGGGTATATGAAGTTGTTCGTCGCCGTTGAGTTTCTAATCACCAGATTTTGGGTGTTTGTGTTGCCGCCGTCGTGGTTCGCGAGTGAAGGTCGTCAGATATCTCGTGTCGCCGGAGTCTGGGTGTCTCGCGAGAAGGTTGCGAAGGTTCGCCGTCGTGGGTGTCGCGTTGCCGTTGCCGGATGTCTCTTCGCCAGCGTCTGGGAGTCTATGAATGTTACTTCACCCAAGAAGAACGGTGGTGTGCGGCGTCTGATTGATTTTCGCGAGAGGGAGCTATTAAGGAATCTTTTATGGTTTAAGGGAACTGTATCTGAATTATGTTGTAATGGTAATGTTTCTAGAACTGCGTTATGTGATAGTTAA

Protein sequence

MISFSSEVAAIREVAAIREENLCVRSSANTEQRVKPEVRKCLVVVYGYMKLFVAVEFLITRFWVFVLPPSWFASEGRQISRVAGVWVSREKVAKVRRRGCRVAVAGCLFASVWESMNVTSPKKNGGVRRLIDFRERELLRNLLWFKGTVSELCCNGNVSRTALCDS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0038489Lag0038489gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0038489.1.exon4Lag0038489.1.exon4exon
Lag0038489.1.exon3Lag0038489.1.exon3exon
Lag0038489.1.exon2Lag0038489.1.exon2exon
Lag0038489.1.exon1Lag0038489.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0038489.1cds.Lag0038489.1_4CDS
cds.Lag0038489.1cds.Lag0038489.1_3CDS
cds.Lag0038489.1cds.Lag0038489.1_2CDS
cds.Lag0038489.1cds.Lag0038489.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0038489.1Lag0038489.1-proteinpolypeptide