Lag0038372.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0038372.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 16023894 .. 16024199 (+)
Sequence length306
RNA-Seq ExpressionLag0038372.1
SyntenyLag0038372.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAGAAGAATACAAAACCGGAGGAAAAGAAAGAGACCCACGCTGCTCGGACTGCTCCAAATGCCGACTCTGCTACTGCCACCGTTGAGGAACACTGCTATCGGAGAGACAACTACGGGGAAAAGGCTGGCGATGGGGAGGTCTCACGGCTGAAGAGGAAGAAGAAAAACAAAAAGAAGGGCGCTGCTCACGGCTGGAACACCAAAAACGGTAGAAGAAATCGATGGAAGAAGGGCTTGACGGATGAAACTTGCGTGAGAAGGGGAAGGTTGCGTGTGTGGCTCAAAAAAGACTTAGACTAA

mRNA sequence

ATGGGCAAGAAGAATACAAAACCGGAGGAAAAGAAAGAGACCCACGCTGCTCGGACTGCTCCAAATGCCGACTCTGCTACTGCCACCGTTGAGGAACACTGCTATCGGAGAGACAACTACGGGGAAAAGGCTGGCGATGGGGAGGTCTCACGGCTGAAGAGGAAGAAGAAAAACAAAAAGAAGGGCGCTGCTCACGGCTGGAACACCAAAAACGGTAGAAGAAATCGATGGAAGAAGGGCTTGACGGATGAAACTTGCGTGAGAAGGGGAAGGTTGCGTGTGTGGCTCAAAAAAGACTTAGACTAA

Coding sequence (CDS)

ATGGGCAAGAAGAATACAAAACCGGAGGAAAAGAAAGAGACCCACGCTGCTCGGACTGCTCCAAATGCCGACTCTGCTACTGCCACCGTTGAGGAACACTGCTATCGGAGAGACAACTACGGGGAAAAGGCTGGCGATGGGGAGGTCTCACGGCTGAAGAGGAAGAAGAAAAACAAAAAGAAGGGCGCTGCTCACGGCTGGAACACCAAAAACGGTAGAAGAAATCGATGGAAGAAGGGCTTGACGGATGAAACTTGCGTGAGAAGGGGAAGGTTGCGTGTGTGGCTCAAAAAAGACTTAGACTAA

Protein sequence

MGKKNTKPEEKKETHAARTAPNADSATATVEEHCYRRDNYGEKAGDGEVSRLKRKKKNKKKGAAHGWNTKNGRRNRWKKGLTDETCVRRGRLRVWLKKDLD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..75

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0038372Lag0038372gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0038372.1.exon1Lag0038372.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0038372.1cds.Lag0038372.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0038372.1Lag0038372.1-proteinpolypeptide