Lag0032517.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032517.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	50S ribosomal protein L11
Location	chr11: 33928849 .. 33933284 (-)
Sequence length	705
RNA-Seq Expression	Lag0032517.1
Synteny	Lag0032517.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCTCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCATGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAATTCAATTTCTCGCTTCGGTTCCTTAGCAATGGCCAATCTTCGTTCCTCATCTCTCCCTCTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGGTAAATTTCTAATTCTGATAAACCCTTAATTTCCTTCAACATTATCCATAATTGGGCTGTGATTTTGTCTGATTTGCTTTTGGGATTTACAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCCACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCAAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGTGGGTTTGTCCTTTCATTCTCTTTTGTTCTGTGTGAATGCTTTGTTATGCCTTCCTTGGCAATGGCTTAATTGTTTGATTTGGAACAGGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGTATTTCCCTTTAAGTGTTTGATGCTCTTTTGGCCGTTCCATTTGTTACTTTTCTGTTAATATCTGCTACTATGTTCATCCAATTTTTCCCTTCCCTTATTTGTGCCAATTGGAATGCCTTTTTGCAAACCCGTTTGGCCTCCCTTGTGTAACTATTCGTTCTCTTTGATTTAATGAAATTTTGTCTGTTTCTTCTTGAAAACTGTTTAGTCAACTTTTGTTTACGATGGGGTGGGCAGGGCTGGGAGGAGAATTAGTGAGGTTACTTACCAAGTTGCTAAACAGATTTCTAATTGCAACTCCTTACTGAGATGTTGGCTATATTAGGATCAATATCTGGCTTATATAAAAAACAGTAACTTACTTAGATTGGTCAAATCTAGGAGAAGGCTTCAGGGCTTAGAGTGGATTTAAACAAAACTCTGGTGGCAGAGATCAATGTTCTTAATACGCATTCTACAGCAGTGGGCCTTGATTTCAGGTCCGAGGTGGGAAATGGCCCCTGAATTACCTTGATATGTAGTTAGGTAACAATCCTAGAAGTATAGTATTTTGGATCCCATAGTTGAAGAAATTGATGAGAAGATAAATGGAAGAAGGCTACATCTTTAGGAGGCAACTGTCTCAACCTAGCAAGACCATATTATCTAATTCACCCATGTATTTATTTTTTTTAGTTTTCAAATTTCCATATGGTTGCAAGGAAGGTGGACCAAATCCGAAGGGATTTCTTTTGGAGCGTCCTAAAGCAAGAAGTTTTCTGGTACCTATCCTTATTCATTGGAACATAACTTTGAGATTCAGCCTATGGAGGAATGGGCACTTGCAATTGCAACAGTAACAGGAGGAATGTTGTTCTATTTACCAAAATGCTGCAGATGTTTCCTGATGAGGTAGAGAAGCTTTGTGGCATATGGTGATTGCTGCTGCTAAGTATGGTGTTGTAGGTTCCTTAAGCTGCTGATTCATAACGAACGGCCAAGCTTATTGTGCAAGAAGTCCCTAGTTCTTCATAGCCAAGCCAGCAATCTAAATCCCTAAGAAAGCTAGGATGGTAGTTGCCAGTTGAAATGTTAACAAGGTTAGCGTTTGGAAGGACTCTGGAAGTAGGCGTGTCCTTTAGGCTGCAGTGTAGTGAAGATAGTGGCACCTGGTATTGTATTTCTAGAGGAATTCAATGGTCAGATGGTTGATAATTGGTTGGGAATTTTGTCCATTGTTAATTTCTCTCTCTCCTTTCATGAAGGGCATAGAGGCTGTTTTTCAAGGTAATACATGATCAGGAAGTTAATAATTGGTTGGGTATTTGGTGCAAGCTTCTCTTTTGGTCTGCCACTTTGGAAGCCAATGCCTCTCTGCTTTTTGTTACCGAAAAAATTGGAAAGGAAGACCTATCTTAAATAGAGCAAAGTTTTCTTCTGGGGTGGTATTTACTTCCGTTCCAATTTTGAAAAGATTGCCGAACTATCTTCTTGTGTCCAGCTGATAAGTCTGGTGCAAGAATATTTGGCAGATATTATCCATCTCTTCATGAAATGTCAGCTTACTACCCATCTCTCTTAGAGGCCGTTGGTTGCTTTTGGACACGTTTTTGCATTTCCTTCTAATTTGAGGCCTTACTTCATGTATTATTAGATGGATTATCTTTACTCAAAATTCGAAAGGGGTTTGTTTTGCAGCTTGATGCTGTTTTTTTATGAAAAAACCAACTTTCATTGAGAAAAAATGAAAGAATACACGGGCATACAAAAAACAAGCCCACAAAAAGGAGTCCAACTAAAGGAAGGGACCCCAATCAAGCAAAATACAACCTAACGGATAATTACAAAACATCTTTGAGACCGAAGCCCAAAGAGAGACATGATAACGAGTAAGGGACCACACGTCCACAGGATCCCTCTCTTTCCCCCTAAACACTCTATTGTTCCTCAACCCCCAAAGATTCCACAACAGAGCACACATCCCCCCAAGCCACAAAAATCTCGCTCTCTCTCTAAAACGCGGATGGAACTCCTCGATCAACCCCCTGTGGTCAACAAAAGACATCCTTTGCAGCTTGATGCTGTTATGACCATTTTCTGAGAATGTTGGTTGGGAGGGGATTGAAGAGTATTTCAGAACAGTAAGAAAGGGTATCACATGAGGTTTGGGACATCATCGTTCTTCTTGCCACTTAACGGAGTGGAAGTTCTAAGGAATTCTATGACTCTTCCCCTTCCTTTATTCCCCCTAATTCGAGATCTTTTTATAACTTCTTTAGGACGGGTTTCCTTTCCTATATATTTCATTCTTTTGATGAAACTGTTTCTTGCAAAAAAATAAAATAAATACAGCCATTGAGCCAAACGATATTGAGACTGAATCTCTACCAGCATGCAGCCAGAGATCTGTATAATCAGTTTGATAACTTATGAAAATCTAGGTGAAGTACCCAAGAGAAAAGTAAAGAGTAAACCTTTTCATTGGAGACAAACTTTCTTTGAAGAAAAGAAGGGAATAATATAAAAAAACTCCTCGAATCTACTTTAATCCAATAGCTGTTGTAATTACAAAATTTCTTATGTTTGGCATTCCAATTAGAAGCCATATGCTGTACAACTCATAAAAAATCTTAAAATTATCATCAAATATTCTAGTGTTTCTTTCGAACCACACCCACAAGGACCAGATCAAGGCCCGAATAACACTTCACATTTTGAATCTGCTCCTTCCCACAATTGTCACTGGCGTTTTGGCTTGGCAAATTGTTCATAAATATTTAAGTAGCATGTTGCAGTGAATCCATAGTTCCTTCAGTGGCTGTCATCCATTTGGGCACAAACCCTCCGAGGGATGGAGGCACTGTTGCAGCTTGAGCATAGTCGCTAGGAGGAGTGCCGACCTCCCATCACAGCTTGATTTTTGCTTGCTGCCATGTTGGTCATAGAAGACGTGCTTGAATTTGTGATACTAAATTTTGGTGGAGCTTCAATGAAATTGTTTATTATATTTAAAAAATGGTGGAGCTAAACAAAATGGTCAACTTATTTTATGAATTTAAAAAAACGTATCACTATATGGAGTTTGAGCTGATTTAGTGGCTTTGTTACATGTTACCTAAAGGTAAAAGTAATGAGTAACCAATCAACAACTATGTAAACAACACTCCATAATCTAAACATAGCCATTGACTCGCAGAAAACTTACTGATAGTAAACACAAAGCTGTATTAACGCAACCAACACTAAATATAGACAAGACAAACATATTAGAAAGCCTACATAATAGAAAGCCTAAATATAAAAATTTAAATCTTCTTTTTACATGTCATCTATTATAAGCTGTAATAAGTGAATTGATCTTATGCAAAAATGACCACAGAACTTTCATATTCTGAAAAAATGCTAATCAGTTAATAACATCTATAGTAGACTTTTTTCGGAACGCCTAGGAGACTCACATCGATACATTACTTTGTTTAAACCCATTTTGGTAGTTAGCATATGCAGAGAAGTTGTTTGCCCGCACTACCTGCTGTACTGCATTTTAACCTGTATGAGCTGTCATGTAGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACCATTGCTGCTGAAAAGTTACCAGATTTGAATTGCTCAACCATTGAATCTGCAATGAGAATCATAGCAGGTACGGCAGCCAATATGGGAATTGAGGTCGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAG

mRNA sequence

ATGGCTTCTTCTCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCATGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAATTCAATTTCTCGCTTCGGTTCCTTAGCAATGGCCAATCTTCGTTCCTCATCTCTCCCTCTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCCACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCAAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACCATTGCTGCTGAAAAGTTACCAGATTTGAATTGCTCAACCATTGAATCTGCAATGAGAATCATAGCAGGTACGGCAGCCAATATGGGAATTGAGGTCGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAG

Coding sequence (CDS)

ATGGCTTCTTCTCTCTCCACCTATCATCAACACCATCTTCTTTCTCCTTCATTTTCTTCAAAAATTACTACTAATGGCATGCAGCTCTCCTCTCCATTTTTCACTTCACCCTCTTCAGGGTTGTCTTCAAAATTCAATTTCTCGCTTCGGTTCCTTAGCAATGGCCAATCTTCGTTCCTCATCTCTCCCTCTCCAAGGCGTCTCAGTGTTGTCTCAATGGCGCCCCCTAAAGCCAAGCCTGGTGGAAAAGCCAAGAAAGTAATTGGGATGATTAAGCTTGCTCTGGAGGCTGGAAAGGCCACCCCAGCTCCTCCTGTTGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATCATGGCCTTTTGTAAGGATTACAATGCAAAGACAGCGGACAAGGCCGGCTATGTGATTCCAGTTGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCGCCTGCTTCTGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAGGATCCAAAGGCAGAGAAAGTGGGAAAGATAACCATTGAACAGTTGCGTACCATTGCTGCTGAAAAGTTACCAGATTTGAATTGCTCAACCATTGAATCTGCAATGAGAATCATAGCAGGTACGGCAGCCAATATGGGAATTGAGGTCGACCCTCCTGTCCTTGAACCTAAAAAGAAGGAACTTGTGTAG

Protein sequence

MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFLISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

Homology

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BLAST of Lag0032517.1 vs. NCBI nr
Match: XP_038876314.1 (50S ribosomal protein L11, chloroplastic [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-113
Identity = 220/234 (94.02%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASSLSTYHQHHLLSPSFSSKIT N   LSSPF TS SSGLSSKFNFSLRFLSNGQSS L
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKITANSKPLSSPFLTSSSSGLSSKFNFSLRFLSNGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISP+PRRLSVVSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPKKK+LV
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKQLV 234

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BLAST of Lag0032517.1 vs. NCBI nr
Match: XP_004145879.2 (50S ribosomal protein L11, chloroplastic [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 217/234 (92.74%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 1   MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISP+PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNC+TIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 234

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BLAST of Lag0032517.1 vs. NCBI nr
Match: KAE8647824.1 (hypothetical protein Csa_000647 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 217/234 (92.74%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 87  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 146

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISP+PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 147 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 206

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 207 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 266

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNC+TIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 267 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 320

[Close]

BLAST of Lag0032517.1 vs. NCBI nr
Match: XP_008437462.1 (PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1 50S ribosomal protein L11 [Cucumis melo var. makuwa] >TYK06036.1 50S ribosomal protein L11 [Cucumis melo var. makuwa])

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 216/234 (92.31%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS +PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lag0032517.1 vs. NCBI nr
Match: XP_022155580.1 (50S ribosomal protein L11, chloroplastic [Momordica charantia])

HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 213/235 (90.64%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTN-GMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSF 60
           MASSLSTY QHHLLSP FSSK + N G QLSSPF   P+SGLSS FNFSL+FLSNGQSS 
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+AEKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot
Match: Q9MAP3 (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-82
Identity = 162/212 (76.42%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 23  TTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFLISPSPRRLSVVSMAPPKAKPGG 82
           T++ +  +S    S S+ LSSK N S++FL   QS  L+S +PR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQSP-LLSSTPRFLTVIAMAPP--KPGG 72

Query: 83  KAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 142
           KAKKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 143 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCST 202
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLRTIAAEKLPDLNC+T
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 203 IESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           IESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot
Match: P31164 (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 161/223 (72.20%), Postives = 183/223 (82.06%), Query Frame = 0


Query: 15  SPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFLISP---SPRRLSVV 74
           +PS SS  +    +L S   T  S  LSS    SL+FL+   S   +SP   S RRLS+V
Sbjct: 8   APSSSSITSPIPRKLCSSLLTPSSLSLSSNPRNSLQFLN---SKLFLSPPSTSHRRLSIV 67

Query: 75  SMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADK 134
           +MAP   KP GKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADK
Sbjct: 68  AMAP---KP-GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADK 127

Query: 135 AGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIA 194
            G+VIPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDP+ EKVGKITI+QLR IA
Sbjct: 128 PGFVIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIA 187

Query: 195 AEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
            EKLPDLNC+TIESAMRIIAGTAANMGI++DPP+L  KKKE++
Sbjct: 188 TEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVI 223

[Close]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot
Match: O78412 (50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.4e-51
Identity = 102/138 (73.91%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY
Sbjct: 2   AKKVVAIIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCSTI 203
           +DKS+TFVLKTPPASVLL KAAGV+KGS +PK  +VG +T +Q+  IA  KLPDLN   +
Sbjct: 62  EDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRL 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ESA+RII GTA NMGI V
Sbjct: 122 ESAIRIIEGTAKNMGIGV 139

[Close]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot
Match: B7JWT8 (50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=rplK PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50
Identity = 100/138 (72.46%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ MIKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V+
Sbjct: 2   AKKVVAMIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTADQAGMVIPVEISVF 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCSTI 203
           +D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT +QLR IA  K+PDLN + I
Sbjct: 62  EDRSFTFVLKTPPASVLIRKAAGVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDI 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           E+AM+I+AGTA NMG+ +
Sbjct: 122 EAAMKIVAGTARNMGVTI 139

[Close]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot
Match: B8HVL5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplK PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.4e-50
Identity = 95/138 (68.84%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 84  AKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           AKKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY
Sbjct: 2   AKKVVAIIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCSTI 203
           +D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT  QLR IA  KLPDLN + +
Sbjct: 62  EDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDV 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ++AMRI+AGTA NMG+ +
Sbjct: 122 DAAMRIVAGTARNMGVTI 139

[Close]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL
Match: A0A0A0KQJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.7e-112
Identity = 217/234 (92.74%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASS+STYHQHHLLSPSFSSKI+ +  +LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISP+PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLRTIAAEKLPDLNC+TIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

[Close]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL
Match: A0A5D3C6S0 (50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001370 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.5e-111
Identity = 216/234 (92.31%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS +PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL
Match: A0A1S3AU30 (50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.5e-111
Identity = 216/234 (92.31%), Postives = 223/234 (95.30%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASSLSTYHQHHLLSPSFSSKI+ N   LSSPF TS SSGLSSKFNFSLRFL+NGQSS L
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS +PRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPK EKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL
Match: A0A6J1DMT9 (50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022678 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.0e-107
Identity = 213/235 (90.64%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTN-GMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSF 60
           MASSLSTY QHHLLSP FSSK + N G QLSSPF   P+SGLSS FNFSL+FLSNGQSS 
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+AEKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNC+TIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL
Match: A0A6J1ET69 (50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435764 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.8e-104
Identity = 207/234 (88.46%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFL 60
           MASSLS YH        FSSK+T N   LSS F  SPSSGLSSKFNFSLRF S+GQSS L
Sbjct: 1   MASSLSIYH-------PFSSKLTANSKHLSSSFLASPSSGLSSKFNFSLRFFSHGQSSSL 60

Query: 61  ISPSPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISP+PRRLSVVSMAPPKAKPGGKAKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+A+KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180

Query: 181 KITIEQLRTIAAEKLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR IAAEKLPDLNC+TIESAMR+IAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of Lag0032517.1 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 )

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-83
Identity = 162/212 (76.42%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 23  TTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFLISPSPRRLSVVSMAPPKAKPGG 82
           T++ +  +S    S S+ LSSK N S++FL   QS  L+S +PR L+V++MAPP  KPGG
Sbjct: 13  TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQSP-LLSSTPRFLTVIAMAPP--KPGG 72

Query: 83  KAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITV 142
           KAKKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEITV
Sbjct: 73  KAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYIIPVEITV 132

Query: 143 YDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCST 202
           +DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLRTIAAEKLPDLNC+T
Sbjct: 133 FDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTT 192

Query: 203 IESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           IESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 193 IESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of Lag0032517.1 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-40
Identity = 103/218 (47.25%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 14  LSPSFSSKITTNGMQLSSPFFTSPSSGLSSKFNFSLRFLSNGQSSFLISPSPRRLSVVSM 73
           ++ S  S + +    L  P   S S+ L+SK N S +FL+N QS  L+S +PR L+V++ 
Sbjct: 1   MASSSLSHLCSCTSSLHHPLSHSISANLTSKTNLSFQFLANRQSP-LLSSTPRSLTVIAG 60

Query: 74  APPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAG 133
           A   +K  GK KKV+G++K+ + AGKAT APP                            
Sbjct: 61  ATAPSKLRGKTKKVVGIVKMNVWAGKATLAPP---------------------------- 120

Query: 134 YVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAE 193
                      D+SFTF+LKTPP S LLLKAAGV+KGSKDPK  KVG ITI+Q+R IA  
Sbjct: 121 -----------DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEV 178

Query: 194 KLPDLNCSTIESAMRIIAGTAANMGIEVDPPVLEPKKK 232
           KLP+LNC+TI S MR IAGTA NMGI++DPP+LEPK K
Sbjct: 181 KLPELNCTTIVSTMRTIAGTAGNMGIDIDPPILEPKNK 178

[Close]

BLAST of Lag0032517.1 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 )

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 85  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVY 144
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT +
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 145 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKAEKVGKITIEQLRTIAAEKLPDLNCS-- 204
            D SF F +K+P  S  + KAAGV+KGS  P    V  +++  +  IA  K  D  C   
Sbjct: 71  KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130

Query: 205 TIESAMRIIAGTAANMGIEV 222
            +ES  + I GTA +MGI++
Sbjct: 131 PLESICKSIIGTANSMGIKI 150

The following BLAST results are available for this feature:

BLAST of Lag0032517.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876314.1	3.3e-113	94.02	50S ribosomal protein L11, chloroplastic [Benincasa hispida]	[more]
XP_004145879.2	1.4e-111	92.74	50S ribosomal protein L11, chloroplastic [Cucumis sativus]	[more]
KAE8647824.1	1.4e-111	92.74	hypothetical protein Csa_000647 [Cucumis sativus]	[more]
XP_008437462.1	1.5e-110	92.31	PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1...	[more]
XP_022155580.1	1.0e-106	90.64	50S ribosomal protein L11, chloroplastic [Momordica charantia]	[more]

BLAST of Lag0032517.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAP3	1.8e-82	76.42	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31164	1.7e-75	72.20	50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 P...	[more]
O78412	6.4e-51	73.91	50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 P...	[more]
B7JWT8	1.1e-50	72.46	50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=r...	[more]
B8HVL5	5.4e-50	68.84	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]

BLAST of Lag0032517.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQJ8	6.7e-112	92.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1	[more]
A0A5D3C6S0	7.5e-111	92.31	50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AU30	7.5e-111	92.31	50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876...	[more]
A0A6J1DMT9	5.0e-107	90.64	50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1ET69	8.8e-104	88.46	50S ribosomal protein L11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lag0032517.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32990.1	1.3e-83	76.42	plastid ribosomal protein l11	[more]
AT5G51610.1	1.8e-40	47.25	Ribosomal protein L11 family protein	[more]
AT4G35490.1	3.7e-22	43.57	mitochondrial ribosomal protein L11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 91..222 e-value: 6.3E-81 score: 284.8
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 58..222
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 87..223 score: 29.651791
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 91..221 e-value: 1.55382E-72 score: 215.007
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 153..221 e-value: 6.1E-25 score: 87.5
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 154..234 e-value: 8.4E-38 score: 130.1
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 149..222
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 84..148 e-value: 1.2E-31 score: 108.3
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 84..153 e-value: 2.8E-36 score: 125.0
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 81..166
IPR006519	Ribosomal protein L11, bacterial-type	TIGRFAM	TIGR01632	TIGR01632	coord: 85..222 e-value: 4.3E-63 score: 209.4
None	No IPR available	PANTHER	PTHR11661:SF10	RIBOSOMAL PROTEIN L11	coord: 58..222
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 208..222

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0032517	Lag0032517	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0032517.1.exon4	Lag0032517.1.exon4	exon
Lag0032517.1.exon3	Lag0032517.1.exon3	exon
Lag0032517.1.exon2	Lag0032517.1.exon2	exon
Lag0032517.1.exon1	Lag0032517.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0032517.1	cds.Lag0032517.1_4	CDS
cds.Lag0032517.1	cds.Lag0032517.1_3	CDS
cds.Lag0032517.1	cds.Lag0032517.1_2	CDS
cds.Lag0032517.1	cds.Lag0032517.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0032517.1	Lag0032517.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding