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Lag0032462.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAGATCTCGTTCTTTTGACTGGAAAGGGAATATGGATTGGCCAGAGGTACTCTGCAGTGAAATATTATTATTTAGTTGAAACTTGAAGACTGTACTGGCTGTGCAGATTGAGGAACATTCCTTACTCGGCTGAAATAGAATGTTTATTTTTTCTCTGAAGTTTTCTTTCGGATGTATAGAGTGTGTTCGTTTGTGTAGTCTCTGCAAGGTTCGAGTTCAGTTTGTTTGATTCTCCATCATGCCTTTGAACTCGCCATTGAAGATCCCCCTCTCCTTTTTGGAGTTCATGTAGACAATTTTATAGTTAAGGTTCTCGTGTAACTTATTTATTTATTTGTCTATTATCATGTATAATGCAAGTGAAATTTATTCATGTGCATTTCCTTTTGTAATTAATTATGATTAATAAATTATGTATAATGCAAGTGAGATTTTTTTTTTTTTTTCTTTGTTCGTGTCCCTAAACACACCACATTTGTTGAATGGACTATTCTAGTCTGATAAAATGTCTTTTATCCTTAGATATTGTTGGACTATTTATCTATTTTCCTTTGATATAGTTTGTTATAGGTGTAGCCTATCTCTATGCTCCACTTGTCCTTGTATTTCTCTTTATATTGGTACATTGTTCATTGTGTAAGAATACAGACAATTATTGAATACAATTCTCAATTATTCTCTCCTATTATTCTGCAACCTTTGATGGTATAGAGTTGGGCTCACTCTGTTCTTTCCTAAAATGAATATTGAAGAATGATCTTCATCTTCTACCTCATCTTCTCAAGAAAACACTCCAGTTGTTTCGCCAACCACACCAATCACAACTTCGGTGGTAACCCCTATTCAAAATCTAAACCAAAATCCTCCCAATCCCACTCCCCCACGAATTCGACCTCAAGTGAATCAAAATCGGAAAAGGAATCCAACCCTTATTCCTCCCCAAACTCTTAATATTGCTCCCTATCATCCTCAGCAACCTTTTCCTTAGTTGTTTTATCTCCAACAACAAGCATTTTATCTGAGACCCCTGTATCCTGCCCCTCCCTCAACCTCAAAATTTTCCTCCGTATCCAAACTTCTTTACCCCAAAAGCCTCTTGTCGTGAAACTCACTAATAACAATTTCTTGCTCTAGAAGAATCAACTTCTCAATGTCGTGCTAGCAAATGGACTATCGGGTTTTTTCGATGGCTCAATTCCAATTCTACTAAAATTTCTGGATCTGAACAACACTCAACTAAATCCTGATTATCTAGGATGGGAGAGGTACAATTGTTTTATTATGTATTGGATTTATTCCTCTTTGTTTGAAGAAAAGATAGGTGAGATAGTTAGCCTTGAATCAACTTCTGAAATCTGGTCTTCTTTAATTCGTTCATATGATTCGAATACAACTATTCATATTATGGCTTTGAAAGCTCAACTTCAGAAAATTAGAAAGGATGGTTTGTTCGTGAGTCAATATTTAGCCAAGATAAAAGAAATAGTTGATAGGTTTGTTGCGATTGGGGAATCGATATCATATCGAGATCATTTAGCTCGTATTTTTTATGGATTAGGTAGTGAATATAATGCTTTTGTTACCACGATTCAAAATAGATCAGATAATCTCACTTCTAAAAGTTACGTAGCCTCTTATTAGCTTATGAAGCACGTTTGGAGAAGCAATCTACAATTGACCATCTAAATTTAGCCCAAGCAAATTTTAGTAGCCTCAACATTCATAATCTAATCGTCGTTCTTCTACCAGGTCTCGACCATAATTTAACCATTTCTCAAAATCCTCCTCTTCTCCATCCCAACTGCACCAACTAAATTTCTCTCACAGTATCCTTGGCAAGCCCCAATCCCCTGTTCAGTGGTCTTCTAAACCAACAAATTCCAAGTTGCAATGCCAAATATGTGGCAAGTTTGACCACACAACCCTGATCTCTCATCATCACACTAACCTTGCATACCAAACCCCTCCTCAACTGCAAGCTCTTGTTCATACTTCAACCAATCCTGTCTCCAATATGTCTCAAGCTTTTTCAGATACCTCATCAACTGTCCAAGTTGAATTTTCTCATCCTGATGAATCGTGA ATGGTTAGATCTCGTTCTTTTGACTGGAAAGGGAATATGGATTGGCCAGAGTCTCTGCAAGGTTCGAGTTCAGTTTGTTTGATTCTCCATCATGCCTTTGAACTCGCCATTGAAGATCCCCCTCTCCTTTTTGGAGTTCATGTAGACAATTTTATAGTTAAGAAGAATCAACTTCTCAATGTCGTGCTAGCAAATGGACTATCGGGTTTTTTCGATGGCTCAATTCCAATTCTACTAAAATTTCTGGATCTGAACAACACTCAACTAAATCCTGATTATCTAGGATGGGAGAGTATCCTTGGCAAGCCCCAATCCCCTGTTCAGTGGTCTTCTAAACCAACAAATTCCAAGTTGCAATGCCAAATATGTGGCAAGTTTGACCACACAACCCTGATCTCTCATCATCACACTAACCTTGCATACCAAACCCCTCCTCAACTGCAAGCTCTTGTTCATACTTCAACCAATCCTGTCTCCAATATGTCTCAAGCTTTTTCAGATACCTCATCAACTGTCCAAGTTGAATTTTCTCATCCTGATGAATCGTGA ATGGTTAGATCTCGTTCTTTTGACTGGAAAGGGAATATGGATTGGCCAGAGTCTCTGCAAGGTTCGAGTTCAGTTTGTTTGATTCTCCATCATGCCTTTGAACTCGCCATTGAAGATCCCCCTCTCCTTTTTGGAGTTCATGTAGACAATTTTATAGTTAAGAAGAATCAACTTCTCAATGTCGTGCTAGCAAATGGACTATCGGGTTTTTTCGATGGCTCAATTCCAATTCTACTAAAATTTCTGGATCTGAACAACACTCAACTAAATCCTGATTATCTAGGATGGGAGAGTATCCTTGGCAAGCCCCAATCCCCTGTTCAGTGGTCTTCTAAACCAACAAATTCCAAGTTGCAATGCCAAATATGTGGCAAGTTTGACCACACAACCCTGATCTCTCATCATCACACTAACCTTGCATACCAAACCCCTCCTCAACTGCAAGCTCTTGTTCATACTTCAACCAATCCTGTCTCCAATATGTCTCAAGCTTTTTCAGATACCTCATCAACTGTCCAAGTTGAATTTTCTCATCCTGATGAATCGTGA MVRSRSFDWKGNMDWPESLQGSSSVCLILHHAFELAIEDPPLLFGVHVDNFIVKKNQLLNVVLANGLSGFFDGSIPILLKFLDLNNTQLNPDYLGWESILGKPQSPVQWSSKPTNSKLQCQICGKFDHTTLISHHHTNLAYQTPPQLQALVHTSTNPVSNMSQAFSDTSSTVQVEFSHPDES Homology
BLAST of Lag0032462.1 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-08 Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of Lag0032462.1 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0
HSP 2 Score: 68.2 bits (165), Expect = 8.5e-08 Identity = 59/204 (28.92%), Postives = 72/204 (35.29%), Query Frame = 0
BLAST of Lag0032462.1 vs. NCBI nr
Match: EXB93772.1 (hypothetical protein L484_010911 [Morus notabilis]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of Lag0032462.1 vs. NCBI nr
Match: RVW56403.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-04 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Lag0032462.1 vs. NCBI nr
Match: RVW73808.1 (hypothetical protein CK203_058306 [Vitis vinifera]) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-04 Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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