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Lag0030942.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGACTCCGGTTCGGACCTGAGCTATCTAGTGGACGAAGCGTACGACAAGGTGAGAGAAGAGGTGGTGAGACTGGTGGGGCCGATGATGAAGAAGGGGTACGAATACGCCGCCGTGGCCGACATGTGTTTCGACGGCGGAGCGGCGGCGGAGGTGGGGCGGAGGATCGGCGACATGTCGTTCGAGTTCGAGAACGGGGTGGAGATTTTGGTGGGGAAAGGGGAAGGGGTATTGACGGAAGTGGAAAAAGGAGTGAAGTGCGTGGGGATCGGACGGTCAGGAAGGCTCGGGATTGGGAGTAATATAATCGGGAACGTTCATCAGCAGAATATGTGGGTCGAGTACGATTTGGCCAATAGGAGAATCGGGTTTGGTGGAGCTGACTGTAGTGGATTGAAATGA ATGATCGACTCCGGTTCGGACCTGAGCTATCTAGTGGACGAAGCGTACGACAAGGTGAGAGAAGAGGTGGTGAGACTGGTGGGGCCGATGATGAAGAAGGGGTACGAATACGCCGCCGTGGCCGACATGTGTTTCGACGGCGGAGCGGCGGCGGAGGTGGGGCGGAGGATCGGCGACATGTCGTTCGAGTTCGAGAACGGGGTGGAGATTTTGGTGGGGAAAGGGGAAGGGGTATTGACGGAAGTGGAAAAAGGAGTGAAGTGCGTGGGGATCGGACGGTCAGGAAGGCTCGGGATTGGGAGTAATATAATCGGGAACGTTCATCAGCAGAATATGTGGGTCGAGTACGATTTGGCCAATAGGAGAATCGGGTTTGGTGGAGCTGACTGTAGTGGATTGAAATGA ATGATCGACTCCGGTTCGGACCTGAGCTATCTAGTGGACGAAGCGTACGACAAGGTGAGAGAAGAGGTGGTGAGACTGGTGGGGCCGATGATGAAGAAGGGGTACGAATACGCCGCCGTGGCCGACATGTGTTTCGACGGCGGAGCGGCGGCGGAGGTGGGGCGGAGGATCGGCGACATGTCGTTCGAGTTCGAGAACGGGGTGGAGATTTTGGTGGGGAAAGGGGAAGGGGTATTGACGGAAGTGGAAAAAGGAGTGAAGTGCGTGGGGATCGGACGGTCAGGAAGGCTCGGGATTGGGAGTAATATAATCGGGAACGTTCATCAGCAGAATATGTGGGTCGAGTACGATTTGGCCAATAGGAGAATCGGGTTTGGTGGAGCTGACTGTAGTGGATTGAAATGA MIDSGSDLSYLVDEAYDKVREEVVRLVGPMMKKGYEYAAVADMCFDGGAAAEVGRRIGDMSFEFENGVEILVGKGEGVLTEVEKGVKCVGIGRSGRLGIGSNIIGNVHQQNMWVEYDLANRRIGFGGADCSGLK Homology
BLAST of Lag0030942.1 vs. NCBI nr
Match: XP_011651212.2 (aspartic proteinase PCS1 [Cucumis sativus] >KAE8650483.1 hypothetical protein Csa_010014 [Cucumis sativus]) HSP 1 Score: 244.2 bits (622), Expect = 6.4e-61 Identity = 117/134 (87.31%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Lag0030942.1 vs. NCBI nr
Match: XP_038878004.1 (aspartic proteinase PCS1 [Benincasa hispida]) HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60 Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Lag0030942.1 vs. NCBI nr
Match: XP_022983616.1 (aspartic proteinase PCS1-like [Cucurbita maxima]) HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59 Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Lag0030942.1 vs. NCBI nr
Match: KAG6581233.1 (Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59 Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Lag0030942.1 vs. NCBI nr
Match: XP_022934878.1 (aspartic proteinase PCS1-like [Cucurbita moschata]) HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59 Identity = 115/134 (85.82%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Lag0030942.1 vs. ExPASy Swiss-Prot
Match: Q9LZL3 (Aspartic proteinase PCS1 OS=Arabidopsis thaliana OX=3702 GN=PCS1 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08 Identity = 40/143 (27.97%), Postives = 67/143 (46.85%), Query Frame = 0
BLAST of Lag0030942.1 vs. ExPASy Swiss-Prot
Match: Q766C3 (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis OX=150966 GN=nep1 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08 Identity = 40/130 (30.77%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of Lag0030942.1 vs. ExPASy Swiss-Prot
Match: Q9LS40 (Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana OX=3702 GN=ASPG1 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 33/130 (25.38%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of Lag0030942.1 vs. ExPASy Swiss-Prot
Match: Q9LTW4 (Aspartic proteinase NANA, chloroplast OS=Arabidopsis thaliana OX=3702 GN=NANA PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 35/131 (26.72%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of Lag0030942.1 vs. ExPASy Swiss-Prot
Match: Q6F4N5 (Aspartyl protease 25 OS=Oryza sativa subsp. japonica OX=39947 GN=AP25 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.2e-05 Identity = 33/132 (25.00%), Postives = 61/132 (46.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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