Lag0027128.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027128.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr10: 45279777 .. 45282524 (+)
Sequence length	918
RNA-Seq Expression	Lag0027128.1
Synteny	Lag0027128.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCTTCAACAACGCCGCCAATTTCGACAATCTTCTCCTTCAAACTCTCATGGGCAGGCTCCAAATCCGCCCTCCAAACAGCACCAACCCCCTTCTCTCCCAATCCCTCGAAGACCTTCTCTTCGATGCGGCCAATCTCTCCGATGAAGACAACGACGAGAACAAAACCCAGCTCGCCAAAGAGGAATCGAAACTCGAAAAGGAGATTATTCGCGTCATTCTCGCCGGAAACACCGATTCTCTAAAACCCAATTCTGGCCAGGCCGTCACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAGGAAAATGGATACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAACCGTGAGTTGAACAGACGGAAGGAGGAAGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGATGAGAAAGAGGAGAAGGTTGGCAAATTGGGTCTTCGGGAGTTGATTGATGGCGGTGATTCGAGTGGCGGTCGGATTCTTCATCGAAATGTCAATGCCAGTTCTCAAAGGTTTCACATCATTTACTTTCAATTTTGCTTTCATTCCTTAGAAAGTCCTATTCTCATGAATTTGAACTGTATAAGAAGTTTAACCATGAGAAGCCATCTTTAAAAAGCAGTTTCTAAAACAAAATCAGGAGGTTTTTTTCTGGAAAAGTTTCCAAATAGCTCTTGCTTTTCTATAGTTTAGATGAAGAATATAAAAACTGAGAAGTAAGACAAGGGGGACTTTCATATTCTTCAATGAAGTTCTGAAGCTGCCACTTAGTTTTTGTCCTCAGCTGCTATTGATATATGCTTTTGCTTGATATATAGGTATGCTTTTTATTTGTATGTCATAAAGTTATCTGCCCTTCGTCAAGTTCATGGAGTAAACCATTTCTTTCACAAGTCTTGTAGTAACTGTGTGTGTAGACACGGGTTCACACTCTTCTATTGATTAGGTAAAGGATTTATGGATGGAGAAGTCTATCCATTACGTATAGGCTTTACTTTAAGGACATTGTGGCACAACGGTCGAGGTCAATCAAAAGGTCCAGGCGGGTCATATGTATGTTGTTTGTATAAATGAAATTTACAGTTATCGTCATTGTATTAGTAATATGTAGTGGTAGATTGAACTATGGAAGTGAACATGTCCACCAGTAATAATGAAACCAAGTAAAAGGAGTTTAGCTAAAGCCTAAAACGACGATAGTTTGACAGAGGAGGTGCTAGGATGCAGTAGAAATCACTATGGCAGAAGCTCAGCCACATGAATCCTCCAATTGTGATTTTCTTTCCGCCCCAATTGGGATTATCCATATCAGATAAAGTAGTTCCATTAAAACAGCCATACATTTGGGAAACCAGAAATCTATAGAATCTACCAGAAATGGCATGAATCCTAGATAGCTCGTCCATATGGTGTTGTTTTGAAATTGATTTCACATCTTTTTGTGCTCTCGATGCCATGAATAAACAAGCAGAGAGAATCACAATCGATATTAGAACAGCCATATATTTACTTCCATACTGCAAGATGTTTTGAATAGAACAACTATTGCAAGAAAGATTTCCACACTATTTTCTCAGAATCTTATAGCAGGATATGGCTGATGAGGTAGATGCTCCTCCAAGAGAAAGTTTGGAACGTGCTTTAATTTTTAGGAAATTTATGGTAACCCTGAATGTAAGGCCAAACGAAGCTTCTTTGGTGCACTTGCTCATAATTGTTTGTTATGTGCTTTATATTCTGAGAGGCCACATGTGATGGTTGTATTGTTGCTTGCTTGTGCTAACTGGAATCTTGGAGTTTTATGTGCTATTCCTTAGTTCCCTTTCTGGGTTTCCCCCTCTTTCCTTTTTTTTGTTTGTTTGTTGGGATTTGAACTTTGAAGGAACACTCAGATTCTCTCGGGCACGGACTCGTGCTATATCATTGCTGCTAAATAGTTCACTTTCATTATTGACTTTGTTCTTGTAAATATTGAATGTTTCAGACTAGATAGAGATTGTCAGTTTGGTCAAATTCTTATATGCAAAAACGACGATCCACTTCCTTTGATGATGATTAGTTTTTTGTTCTAACTCGATGCTCGTACACTTATCCTATTTCATTGCATATCTTTCCATTCAGGTTTTAGTCAACCTGAGTTACAGTCTTTCGATCAGTATAAGAAGTTTGGATACCGAAGGACGTTGCTATGGACTATCGTTTTACAGATTGCACCTGGGTGTTTCTGCAGTTTGGACACTGAACTTCTTGTGTATGTTGGACAGTAAAGGAAATGAGATGAATACATAGATTCAGTAACATTCACTCTGTTTGATCAGTTTCTTCTCTATCATTTTGATTAATTATTTGCTCTTTGCCCTTTTCAGTTCACTTCTTCTGTGTTGTGTAGTTGTTCATTCTTGCAGGATCCTTTACCTGTTTCCTGTTTTTTTTTCCTTAGCGTTTTAGAGATTTCATCAATCAATGATAAATGCAATTTCATCCATTTTGTTTAAGAGAGGTTCACATATATTGCTAATTGATCTGTATTTTCTCAGAACTTGCAACTGTGAATCTCACAGTGCTGAGATGTTTTTCGTCACGTCTCATGTTCACAGGACCGGTACGGGTACGGGGACGGGGATGAGGATGGCTTCCCCGCCCCTCATTTAA

mRNA sequence

ATGAATTCCTTCAACAACGCCGCCAATTTCGACAATCTTCTCCTTCAAACTCTCATGGGCAGGCTCCAAATCCGCCCTCCAAACAGCACCAACCCCCTTCTCTCCCAATCCCTCGAAGACCTTCTCTTCGATGCGGCCAATCTCTCCGATGAAGACAACGACGAGAACAAAACCCAGCTCGCCAAAGAGGAATCGAAACTCGAAAAGGAGATTATTCGCGTCATTCTCGCCGGAAACACCGATTCTCTAAAACCCAATTCTGGCCAGGCCGTCACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAGGAAAATGGATACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAACCGTGAGTTGAACAGACGGAAGGAGGAAGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGATGAGAAAGAGGAGAAGGTTGGCAAATTGGGTCTTCGGGAGTTGATTGATGGCGGTGATTCGAGTGGCGGTCGGATTCTTCATCGAAATGTCAATGCCAGTTCTCAAAGGCTTTACTTTAAGGACATTGTGGCACAACGGTCGAGGTCAATCAAAAGGTCCAGGCGGGTCATATGTTTTAGTCAACCTGAGTTACAGTCTTTCGATCAGTATAAGAAGTTTGGATACCGAAGGACGTTGCTATGGACTATCGTTTTACAGATTGCACCTGGGTGTTTCTGCAGTTTGGACACTGAACTTCTTGTAACTTGCAACTGTGAATCTCACAGTGCTGAGATGTTTTTCGTCACGTCTCATGTTCACAGGACCGGTACGGGTACGGGGACGGGGATGAGGATGGCTTCCCCGCCCCTCATTTAA

Coding sequence (CDS)

ATGAATTCCTTCAACAACGCCGCCAATTTCGACAATCTTCTCCTTCAAACTCTCATGGGCAGGCTCCAAATCCGCCCTCCAAACAGCACCAACCCCCTTCTCTCCCAATCCCTCGAAGACCTTCTCTTCGATGCGGCCAATCTCTCCGATGAAGACAACGACGAGAACAAAACCCAGCTCGCCAAAGAGGAATCGAAACTCGAAAAGGAGATTATTCGCGTCATTCTCGCCGGAAACACCGATTCTCTAAAACCCAATTCTGGCCAGGCCGTCACGATCGGCGAGCACCATATATGCGTGGGGTTTCATGAGGAGAAGGATTCGGATTATCGAGTTTGGGAATGGCATGGGCATATTATGTTGTTTGATGAGGAAAATGGATACTCGCCGGAGTATATTTATGGGAATTACTTTGAGAGGCTTCAGGGGAAGGTCAACCGTGAGTTGAACAGACGGAAGGAGGAAGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAAGATGAGAAAGAGGAGAAGGTTGGCAAATTGGGTCTTCGGGAGTTGATTGATGGCGGTGATTCGAGTGGCGGTCGGATTCTTCATCGAAATGTCAATGCCAGTTCTCAAAGGCTTTACTTTAAGGACATTGTGGCACAACGGTCGAGGTCAATCAAAAGGTCCAGGCGGGTCATATGTTTTAGTCAACCTGAGTTACAGTCTTTCGATCAGTATAAGAAGTTTGGATACCGAAGGACGTTGCTATGGACTATCGTTTTACAGATTGCACCTGGGTGTTTCTGCAGTTTGGACACTGAACTTCTTGTAACTTGCAACTGTGAATCTCACAGTGCTGAGATGTTTTTCGTCACGTCTCATGTTCACAGGACCGGTACGGGTACGGGGACGGGGATGAGGATGGCTTCCCCGCCCCTCATTTAA

Protein sequence

MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRELIDGGDSSGGRILHRNVNASSQRLYFKDIVAQRSRSIKRSRRVICFSQPELQSFDQYKKFGYRRTLLWTIVLQIAPGCFCSLDTELLVTCNCESHSAEMFFVTSHVHRTGTGTGTGMRMASPPLI

Homology

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BLAST of Lag0027128.1 vs. NCBI nr
Match: XP_022145740.1 (uncharacterized protein LOC111015123 [Momordica charantia])

HSP 1 Score: 364.4 bits (934), Expect = 9.7e-97
Identity = 190/205 (92.68%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SF+N ANFDNLLLQTLMGRLQIRPPN+ NPLLSQSLEDLLFDAANLSD+DND+NKTQL
Sbjct: 1   MSSFSNTANFDNLLLQTLMGRLQIRPPNNNNPLLSQSLEDLLFDAANLSDDDNDDNKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEESKLEKEIIRVIL GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESKLEKEIIRVILTGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEE--EEEEDEKEEKVGKLGL 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN+RKEE+E+EEEE  EEE+DEK+EKVGKLGL
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGL 180

Query: 181 RELIDGGDSSGGRILHRNVNASSQR 204
           RELIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 RELIDGGDSSGGRILHRNVNASSQR 205

[Close]

BLAST of Lag0027128.1 vs. NCBI nr
Match: KAG6596424.1 (hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.4 bits (895), Expect = 3.2e-92
Identity = 182/203 (89.66%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           MNSFNN ANFDNLLLQTLMGRLQIRP ++ NPLL+QSLEDLLFDAANLSD+DNDENKTQL
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GN DSLKPNSGQAVTIGEHH+CVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHVCVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN++   E  EEEEEE++DEKEE+VGKLGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEEDDDEKEEEVGKLGLRE 180

Query: 181 LIDGGDSSGGRILHRNVNASSQR 204
           LIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQR 200

[Close]

BLAST of Lag0027128.1 vs. NCBI nr
Match: XP_038905388.1 (AT-rich interactive domain-containing protein 4B isoform X1 [Benincasa hispida])

HSP 1 Score: 347.1 bits (889), Expect = 1.6e-91
Identity = 182/207 (87.92%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNS--TNPLLSQSLEDLLFDAANLSDEDNDENKT 60
           MNSF N ANFDNLLLQTLM RL IRP N+   NPLLSQSLE+LLFDAANLSD+DNDENKT
Sbjct: 1   MNSFANTANFDNLLLQTLMERLHIRPSNNNHNNPLLSQSLEELLFDAANLSDDDNDENKT 60

Query: 61  QLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGH 120
           QLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICV FHEEKDSD+RVWEWHGH
Sbjct: 61  QLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVAFHEEKDSDFRVWEWHGH 120

Query: 121 IMLFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGL 180
           +MLFDEE+GYSPEYIYGNYFERL+GKVNRELN+RKEEEEEE+EEEEE+DEKEEKVGKLGL
Sbjct: 121 VMLFDEEDGYSPEYIYGNYFERLRGKVNRELNKRKEEEEEEDEEEEEDDEKEEKVGKLGL 180

Query: 181 RELIDGGDSSGGRILHRNVNASSQRLY 206
           RELIDGGDS+  RILHRNV+ASSQR++
Sbjct: 181 RELIDGGDSTAARILHRNVSASSQRIW 207

[Close]

BLAST of Lag0027128.1 vs. NCBI nr
Match: XP_022934613.1 (uncharacterized protein LOC111441746 [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 2.1e-91
Identity = 181/203 (89.16%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SFNN ANFDNLLLQTLMGRLQIRP ++ NPLL+QSLEDLLFDAANLSD+DNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GN DSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN++   E  EEEEE+++DEKEE+VGKLGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEDDDDEKEEEVGKLGLRE 180

Query: 181 LIDGGDSSGGRILHRNVNASSQR 204
           LIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQR 200

[Close]

BLAST of Lag0027128.1 vs. NCBI nr
Match: XP_023005891.1 (uncharacterized protein LOC111498761 [Cucurbita maxima])

HSP 1 Score: 346.7 bits (888), Expect = 2.1e-91
Identity = 180/203 (88.67%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SFNN ANFDNLLLQTLMGRLQIRP ++ NP+L+QSLEDLLFDAANLSD+DNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN++    E EEEEEE++DEKEE + KLGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK----EAEEEEEEDDDEKEENLSKLGLRE 180

Query: 181 LIDGGDSSGGRILHRNVNASSQR 204
           LIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQR 199

[Close]

BLAST of Lag0027128.1 vs. ExPASy TrEMBL
Match: A0A6J1CVB7 (uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015123 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.7e-97
Identity = 190/205 (92.68%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SF+N ANFDNLLLQTLMGRLQIRPPN+ NPLLSQSLEDLLFDAANLSD+DND+NKTQL
Sbjct: 1   MSSFSNTANFDNLLLQTLMGRLQIRPPNNNNPLLSQSLEDLLFDAANLSDDDNDDNKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEESKLEKEIIRVIL GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESKLEKEIIRVILTGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEE--EEEEDEKEEKVGKLGL 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN+RKEE+E+EEEE  EEE+DEK+EKVGKLGL
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGL 180

Query: 181 RELIDGGDSSGGRILHRNVNASSQR 204
           RELIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 RELIDGGDSSGGRILHRNVNASSQR 205

[Close]

BLAST of Lag0027128.1 vs. ExPASy TrEMBL
Match: A0A6J1KW97 (uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.0e-91
Identity = 180/203 (88.67%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SFNN ANFDNLLLQTLMGRLQIRP ++ NP+L+QSLEDLLFDAANLSD+DNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN++    E EEEEEE++DEKEE + KLGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK----EAEEEEEEDDDEKEENLSKLGLRE 180

Query: 181 LIDGGDSSGGRILHRNVNASSQR 204
           LIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQR 199

[Close]

BLAST of Lag0027128.1 vs. ExPASy TrEMBL
Match: A0A6J1F855 (uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC111441746 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.0e-91
Identity = 181/203 (89.16%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SFNN ANFDNLLLQTLMGRLQIRP ++ NPLL+QSLEDLLFDAANLSD+DNDENKTQL
Sbjct: 1   MSSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
           AKEES LEKEIIRVIL GN DSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGKVNRELN++   E  EEEEE+++DEKEE+VGKLGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEDDDDEKEEEVGKLGLRE 180

Query: 181 LIDGGDSSGGRILHRNVNASSQR 204
           LIDGGDSSGGRILHRNVNASSQR
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQR 200

[Close]

BLAST of Lag0027128.1 vs. ExPASy TrEMBL
Match: A0A6J1F6Q3 (uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC111441374 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.5e-87
Identity = 178/204 (87.25%), Postives = 190/204 (93.14%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNS-TNPLLSQSLEDLLFDAANLSDEDNDENKTQ 60
           MNSFNN ANFDNLLLQTLMGRLQIRPPNS  NPL+SQSLEDLLFD ANLSD+DNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHI 120
           LAKEESKLEKEIIR+ILAGN+DSLKPNSGQAVTIGEHHICVGFHEE DS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEE-DSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLR 180
           MLFDEENGY+PEYIYGNYFE L GKV REL++ KEEEE+E EEEE+ +E EEKVG+LGLR
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLLGKVYRELHKLKEEEEKENEEEEDGNEDEEKVGELGLR 180

Query: 181 ELIDGGDSSGGRILHRNVNASSQR 204
           ELI+GGDSS GRILHRNVNASSQR
Sbjct: 181 ELINGGDSSAGRILHRNVNASSQR 203

[Close]

BLAST of Lag0027128.1 vs. ExPASy TrEMBL
Match: A0A6J1J2Z9 (uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.3e-86
Identity = 176/204 (86.27%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNS-TNPLLSQSLEDLLFDAANLSDEDNDENKTQ 60
           MNSFNN ANFDNLLLQTLMGRLQIR PNS  NPL+SQSLEDLLFD ANLSD+DNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRHPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHI 120
           LAKEESKLEKEIIR+ILAGN+DSLKPNSGQAVTIGEHHICVGFHEEKDS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLR 180
           MLFDEENGY+PEYIYGNYFE LQGK  REL++ KEEE +E EEEE     EEKVG+LGLR
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLQGKFYRELHKPKEEEVKENEEEE-----EEKVGELGLR 180

Query: 181 ELIDGGDSSGGRILHRNVNASSQR 204
           ELI+GGDSS GRILHRNVNASSQR
Sbjct: 181 ELINGGDSSAGRILHRNVNASSQR 199

[Close]

BLAST of Lag0027128.1 vs. TAIR 10
Match: AT3G53630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 245.4 bits (625), Expect = 6.1e-65
Identity = 133/205 (64.88%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MNSFNNAANFDNLLLQTLMGRLQIRPPNSTNPLLSQSLEDLLFDAANLSDEDNDENKTQL 60
           M+SFN  +N DNLL+QTL+GRLQIRPPNS    LSQSL+DLLF + +   +D+ E +T L
Sbjct: 1   MSSFNGNSNIDNLLIQTLLGRLQIRPPNS--HFLSQSLDDLLFKSDDSDGDDDGEGQTSL 60

Query: 61  AKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIM 120
            +EE++LEKE+IRVI++G +DSLKPNSGQAVT+ EHHICVGFHE+++SDYRVWEWHGHIM
Sbjct: 61  DREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRE 180
           LFDEENGY+PEYIYGNYFERL  K+    NRR E+E+++E        KEE+V  LGLRE
Sbjct: 121 LFDEENGYTPEYIYGNYFERLPVKLPN--NRRVEKEKKKE-------MKEEEVENLGLRE 180

Query: 181 LIDGGDSSGGRILHR-NVNASSQRL 205
           LIDGGD++ GRILHR N+N  S R+
Sbjct: 181 LIDGGDAAPGRILHRNNINIGSSRV 194

[Close]

BLAST of Lag0027128.1 vs. TAIR 10
Match: AT4G18692.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 134 YGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRELIDGGDSSGGRIL 193
           +GNYFERL  K+    NR  E+E+++E        KEE+V   GLRELIDGGD++ GRIL
Sbjct: 4   FGNYFERLPVKLPN--NRHVEKEKKKE-------VKEEEVENWGLRELIDGGDAAPGRIL 63

Query: 194 HR-NVNASSQR 204
           HR N+N  S R
Sbjct: 64  HRNNINIGSSR 65

[Close]

BLAST of Lag0027128.1 vs. TAIR 10
Match: AT3G53342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-05
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 134 YGNYFERLQGKVNRELNRRKEEEEEEEEEEEEEDEKEEKVGKLGLRELIDGGDSSGGRIL 193
           +GNYFERL  K+    NR  E+E+++E        KEE+V   GLRELIDGGD + GRIL
Sbjct: 4   FGNYFERLPVKLPN--NRHVEKEKKKE-------VKEEEVENWGLRELIDGGDVAPGRIL 63

Query: 194 HR-NVNASSQR 204
           HR N+N  S R
Sbjct: 64  HRNNINIGSSR 65

The following BLAST results are available for this feature:

BLAST of Lag0027128.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145740.1	9.7e-97	92.68	uncharacterized protein LOC111015123 [Momordica charantia]	[more]
KAG6596424.1	3.2e-92	89.66	hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038905388.1	1.6e-91	87.92	AT-rich interactive domain-containing protein 4B isoform X1 [Benincasa hispida]	[more]
XP_022934613.1	2.1e-91	89.16	uncharacterized protein LOC111441746 [Cucurbita moschata]	[more]
XP_023005891.1	2.1e-91	88.67	uncharacterized protein LOC111498761 [Cucurbita maxima]	[more]

BLAST of Lag0027128.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0027128.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVB7	4.7e-97	92.68	uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1KW97	1.0e-91	88.67	uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761...	[more]
A0A6J1F855	1.0e-91	89.16	uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1F6Q3	1.5e-87	87.25	uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A6J1J2Z9	1.3e-86	86.27	uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390...	[more]

BLAST of Lag0027128.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53630.1	6.1e-65	64.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18692.1	1.4e-05	52.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53342.1	3.2e-05	52.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..173
None	No IPR available	PANTHER	PTHR35286	EXPRESSED PROTEIN	coord: 1..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0027128	Lag0027128	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0027128.1.exon1	Lag0027128.1.exon1	exon
Lag0027128.1.exon2	Lag0027128.1.exon2	exon
Lag0027128.1.exon3	Lag0027128.1.exon3	exon
Lag0027128.1.exon4	Lag0027128.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0027128.1	cds.Lag0027128.1	CDS
cds.Lag0027128.1	cds.Lag0027128.1_2	CDS
cds.Lag0027128.1	cds.Lag0027128.1_3	CDS
cds.Lag0027128.1	cds.Lag0027128.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0027128.1	Lag0027128.1-protein	polypeptide