Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAAAAACGAGAGCAAACAAAGAGAGAGATAATGAGGAAGAAGCAGTGCCAGTTAACACTGAGATAGCGAAAGCAAAAGCAAAGAAGAGAAGAACACCTGAAGAGAGGGAAGCCAAGAAAAGAAAGAAACAACGGAGGATTGAGAATATTCAAGAAGAACCAGTGAATGTCCCAGAAACGGAGGGAGCTCAAAATCCTGAAGTAGAACCGATAGCTCCAGATACGGTTCAAGAAGAAAATGTTGAAAAGAATCAAGAAACAGAGTCTGTTGAAGTTCGAGACGACCAGGCCGCGGTTGTGTCTGAAGAAGAGAATGAACAGGAACCGGTGCAGGAGGCTCAGGTGGAGGTAATCATGCCAGAGGTACCAAAGCACCGCCGCATAAAGCGGAAGGCGGGTCGCATTAGGGTGATTCGAAATACCTCATCGCCTCCATCGTCAGATTCTGAGGAAGAGAGAAGGGAACGAGAAAATAAGGAGGTTGAAGACAAGGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAATAG mRNA sequence ATGGCAAAAACGAGAGCAAACAAAGAGAGAGATAATGAGGAAGAAGCAGTGCCAGTTAACACTGAGATAGCGAAAGCAAAAGCAAAGAAGAGAAGAACACCTGAAGAGAGGGAAGCCAAGAAAAGAAAGAAACAACGGAGGATTGAGAATATTCAAGAAGAACCAGTGAATGTCCCAGAAACGGAGGGAGCTCAAAATCCTGAAGTAGAACCGATAGCTCCAGATACGGTTCAAGAAGAAAATGTTGAAAAGAATCAAGAAACAGAGTCTGTTGAAGTTCGAGACGACCAGGCCGCGGTTGTGTCTGAAGAAGAGAATGAACAGGAACCGGTGCAGGAGGCTCAGGTGGAGGTAATCATGCCAGAGGTACCAAAGCACCGCCGCATAAAGCGGAAGGCGGGTCGCATTAGGGTGATTCGAAATACCTCATCGCCTCCATCGTCAGATTCTGAGGAAGAGAGAAGGGAACGAGAAAATAAGGAGGTTGAAGACAAGGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAATAG Coding sequence (CDS) ATGGCAAAAACGAGAGCAAACAAAGAGAGAGATAATGAGGAAGAAGCAGTGCCAGTTAACACTGAGATAGCGAAAGCAAAAGCAAAGAAGAGAAGAACACCTGAAGAGAGGGAAGCCAAGAAAAGAAAGAAACAACGGAGGATTGAGAATATTCAAGAAGAACCAGTGAATGTCCCAGAAACGGAGGGAGCTCAAAATCCTGAAGTAGAACCGATAGCTCCAGATACGGTTCAAGAAGAAAATGTTGAAAAGAATCAAGAAACAGAGTCTGTTGAAGTTCGAGACGACCAGGCCGCGGTTGTGTCTGAAGAAGAGAATGAACAGGAACCGGTGCAGGAGGCTCAGGTGGAGGTAATCATGCCAGAGGTACCAAAGCACCGCCGCATAAAGCGGAAGGCGGGTCGCATTAGGGTGATTCGAAATACCTCATCGCCTCCATCGTCAGATTCTGAGGAAGAGAGAAGGGAACGAGAAAATAAGGAGGTTGAAGACAAGGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAATAG Protein sequence MAKTRANKERDNEEEAVPVNTEIAKAKAKKRRTPEEREAKKRKKQRRIENIQEEPVNVPETEGAQNPEVEPIAPDTVQEENVEKNQETESVEVRDDQAAVVSEEENEQEPVQEAQVEVIMPEVPKHRRIKRKAGRIRVIRNTSSPPSSDSEEERRERENKEVEDKAREEEAKKAEE
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 148..176 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 80..101 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..113 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 147..176 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 128..176 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..53 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Lag0022547 | Lag0022547 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lag0022547.1.exon1 | Lag0022547.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.Lag0022547.1 | cds.Lag0022547.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lag0022547.1 | Lag0022547.1-protein | polypeptide |
|
