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Lag0021445.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCTGATTCCAATTTCTGGCTTCCTCCCCACTTTTTATCCGACCACGACACCCTCCCCGGAAAACCCACCTCCGCCGCCGCCTTCCCCACCGACTTCCCTTATGACTTCAGCCCCTCTGCCGTTGATTCTCCAGTCGAATCTGTCCTTGGCTCCAACGAGACCGACAGTACCGCTAGAAACGACGATGACGAGGAAGACTTTCTCGCTACGTTGACGCAGCGGCTTACTCAGTCCACCCTTCGTGATTATGAAAAACTTGGTTTCTGTCCACAAATCCCAAGTACCCATCTGTTGATTTTTCTTTTATTGACTCGATTTTTGTCTCTTCGATGAGTTTCTGATTTCCGGGCGACTCTCTTTTGCTTACCTTTCGTCGCCGACTTGAATCAGTACATCTCCGGCTCGGTTTTCCTTCTCCTCGTCTTCCAAACGCGTGGATTTTTTTTGTTCGACGCGGTGACTGGAAGCTTACCCACGGTGACTTGA ATGGCCTCTGATTCCAATTTCTGGCTTCCTCCCCACTTTTTATCCGACCACGACACCCTCCCCGGAAAACCCACCTCCGCCGCCGCCTTCCCCACCGACTTCCCTTATGACTTCAGCCCCTCTGCCGTTGATTCTCCAGTCGAATCTGTCCTTGGCTCCAACGAGACCGACAGTACCGCTAGAAACGACGATGACGAGGAAGACTTTCTCGCTACGTTGACGCAGCGGCTTACTCAGTCCACCCTTCGTGATTATGAAAAACTTGTTTCTGATTTCCGGGCGACTCTCTTTTGCTTACCTTTCGTCGCCGACTTGAATCAGTACATCTCCGGCTCGGTTTTCCTTCTCCTCGTCTTCCAAACGCGTGGATTTTTTTTGTTCGACGCGGTGACTGGAAGCTTACCCACGGTGACTTGA ATGGCCTCTGATTCCAATTTCTGGCTTCCTCCCCACTTTTTATCCGACCACGACACCCTCCCCGGAAAACCCACCTCCGCCGCCGCCTTCCCCACCGACTTCCCTTATGACTTCAGCCCCTCTGCCGTTGATTCTCCAGTCGAATCTGTCCTTGGCTCCAACGAGACCGACAGTACCGCTAGAAACGACGATGACGAGGAAGACTTTCTCGCTACGTTGACGCAGCGGCTTACTCAGTCCACCCTTCGTGATTATGAAAAACTTGTTTCTGATTTCCGGGCGACTCTCTTTTGCTTACCTTTCGTCGCCGACTTGAATCAGTACATCTCCGGCTCGGTTTTCCTTCTCCTCGTCTTCCAAACGCGTGGATTTTTTTTGTTCGACGCGGTGACTGGAAGCTTACCCACGGTGACTTGA MASDSNFWLPPHFLSDHDTLPGKPTSAAAFPTDFPYDFSPSAVDSPVESVLGSNETDSTARNDDDEEDFLATLTQRLTQSTLRDYEKLVSDFRATLFCLPFVADLNQYISGSVFLLLVFQTRGFFLFDAVTGSLPTVT Homology
BLAST of Lag0021445.1 vs. NCBI nr
Match: XP_038893422.1 (uncharacterized protein LOC120082215 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 9.0e-26 Identity = 68/91 (74.73%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Lag0021445.1 vs. NCBI nr
Match: XP_008464895.1 (PREDICTED: uncharacterized protein LOC103502654 [Cucumis melo] >KAA0051556.1 WAS/WASL-interacting protein family member 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK21266.1 WAS/WASL-interacting protein family member 2, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-24 Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Lag0021445.1 vs. NCBI nr
Match: XP_004149945.1 (uncharacterized protein LOC101215147 [Cucumis sativus] >KGN50597.1 hypothetical protein Csa_021479 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-24 Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Lag0021445.1 vs. NCBI nr
Match: XP_022138921.1 (uncharacterized protein LOC111009981 [Momordica charantia]) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-20 Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of Lag0021445.1 vs. NCBI nr
Match: XP_022942517.1 (uncharacterized protein LOC111447530 [Cucurbita moschata]) HSP 1 Score: 89.0 bits (219), Expect = 3.5e-14 Identity = 52/90 (57.78%), Postives = 57/90 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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