Lag0020099.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0020099.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 48061356 .. 48063795 (-)
Sequence length342
RNA-Seq ExpressionLag0020099.1
SyntenyLag0020099.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTGATGAAGGGGTGTTGTGGTCAATCAACGGTGAGGAAAGCAGCAACGTAGGCAAAGGAAAGTGGACTACAATTGTCAGGGTGACGTGGCGACTGTCAGAGCAGAGGGTGAATATGTGGGAGATTACGTGGCAGCTGAGGAGTGGAGGAGAAGATATTTATGGGAAAGTTAATGGATCATGTAAGTGACAGACATGTGGTTGTAATTGGTTTTCAAGTATCAACCTTTGATGGGACCCAAATTTTGTACTGGTTTTGAGCTCTACACGTTGCTTAAAAGGCCAACCATTCAATTATTTCATTTATTTTTGTCACCTACTTGAAGAATATAAAGAATAATTTTCAAGAAAATTTGATAATGTGAAAGTTTCCTATGGAAGATAATGGAAAGATTAGAGAAATTTGATCATACGATTATGGGAATTCCTTCATTACCTTGAATGTTAAATTTTCAAGTTGGTTAAATGATTATAAACACCCCTCAACTTCGGTTAGTTTCAATTATACACCTAAACTTTCAAAAGTTTCATTTTAATCCTTGTAGTTTGAAGTTTGTTTCGAAATGACCTTTGGAGACATTTTTCATTAAATTTATGAACGAAAAATGATGTATTTGCATGTGTTTTTATTGTTTTTTTTTTCTATGTATATGTTCAAATATGTTTACATAAGCAACAATATACATATGCAAACACGTCATTTTCCGTTCATAAATTTAAGGTAAAATGCTTTCAAGGATTGTTTTGAAACAAACTTCAAACTAAAAAGACTAAAATGAGACTTTTGAAAGTTTAGAGATATAATTGAATCCAACCCCATAGTTCAGGGGTATTTTTGATAATTTAATCTTTCAAGTTTAATATGATTAAGATTCAATAAACAGTTATCAAAGAAGTTTAGTTTTATGTTTTTTTTTTAATACGGAAAATAAAAAATAGTTATCAAAACATATATAGATTTTGTTTTTAAAAAACAAAAAACAAAATATAGAAAAGCAAAAAACCAAAAACTGAAATGGTTATCAAAAGAACTTTAGTGTTTTGCCTATTATTTTCGATCCTTTTGAGATTTTTTTACTATTTTTTTTTGTCTTTTTAGAGATTCAAACTTCTAAACTTTTAGTCGAACATATAATGATCTAATTAATTGAATTATACTCATGTTGACAAATTTTAATTTTGGTTCATTTTGGTCTTTATACTTTCATAAAACATTGATTTTGATCTTTATATATGTTTAGTTTTTGTCCATTTTAACTTCTATACTTTTCTTCTGATGTTATTTTGGTTCCTATATGCTTTTGAAAATTGATCCTTATTATCATTTTATTTTATTTCTTATCACAATTTTTGTACAATACTAGATTGGATAATTTTTTTAAAAATATTGTTATTATTATTTGTTATATATGTGTGATTTTTTTTTAAAACTTTGTGATTATGGATCAAAATGGTTACTTTTTGACCATACAAGGACCAAGGACCAAAATGAGCAAATGTACAAGGAGAAAATAGACTTAAAACAAAAAAATTACAAAAATAACCTTTTAGGTCACCAAACTAACCATTAATCTAACAAGAAAATAAATGGGAGAGTTAACCAATAAAAAGACTTATTAAAAGATATGGTGAACTTATGGATTTATCAAACTCATGAACTACAATAAACAACCTTGTTAACATGATGGCAGACAAAAGAAGTAAAAGTAGAGATTAAAAAGTGAATGTTAGAACTTAGAAGTAATGGTTCCTACCCAAGATGAAGGGATTGCTTGGGTGTTGTGTCCAAGGATTCATATTTAACCCTCAAACAATAGCTATATCGTGTTCTAACGTGGAAATGAAGAGATTTAAGCTTATATACAACTACTTCTAAATCAAATAAAACTTCGTCAATCGAGCTGTCACTAATGAACTTAAAGGATACACTATCTAACTGTGAAAAAAAAAATTCCTCTTTAATTTAGTATAAAACATTTCAAGTTAAATCATAGCACCCATCCTTACATTTAATTATAGTTTATTAGGTTCTTACCTCTAAAAGTTCCATTAGTATCCTTGAGCTTACTAATTGACCATGACCTTCACGTGACAAAAACAGTGAATTTGTTTGAGAGGGAAAGACGTGACCTGCAAAACCAATAAAAACTATTGTACACTGGTGTGATGCCTAAGTTAGATAAACAATCAGAAGTATATGTAATTCCAATTTTTCGAACCCTTTTTCAGGTGTGAAAAATGGTATTTATACTTGCATCGTCTCTTAGGGCTCTTCTTGGCTTCGGGAGCCGTTTGAGATCGAATTCGATCGAACCGGGACATCGAGAGTCAGTTGGGAGAAGAACAAGCTCGACCCACTTAAGTGGGCCGAGAGTCGGCCTCAGCCTATGGTCAAGGGCGAGCATGAGACTGAACCAAGGACCGATCATAAGTGA

mRNA sequence

ATGGAGGGTGATGAAGGGGTGTTGTGGTCAATCAACGGTGAGGAAAGCAGCAACGTAGGCAAAGGAAAGTGGACTACAATTGTCAGGGTGACGTGGCGACTGTCAGAGCAGAGGGTGAATATGTGGGAGATTACGTGGCAGCTGAGGAGTGGAGGAGAAGATATTTATGGGAAAGGCTCTTCTTGGCTTCGGGAGCCGTTTGAGATCGAATTCGATCGAACCGGGACATCGAGAGTCAGTTGGGAGAAGAACAAGCTCGACCCACTTAAGTGGGCCGAGAGTCGGCCTCAGCCTATGGTCAAGGGCGAGCATGAGACTGAACCAAGGACCGATCATAAGTGA

Coding sequence (CDS)

ATGGAGGGTGATGAAGGGGTGTTGTGGTCAATCAACGGTGAGGAAAGCAGCAACGTAGGCAAAGGAAAGTGGACTACAATTGTCAGGGTGACGTGGCGACTGTCAGAGCAGAGGGTGAATATGTGGGAGATTACGTGGCAGCTGAGGAGTGGAGGAGAAGATATTTATGGGAAAGGCTCTTCTTGGCTTCGGGAGCCGTTTGAGATCGAATTCGATCGAACCGGGACATCGAGAGTCAGTTGGGAGAAGAACAAGCTCGACCCACTTAAGTGGGCCGAGAGTCGGCCTCAGCCTATGGTCAAGGGCGAGCATGAGACTGAACCAAGGACCGATCATAAGTGA

Protein sequence

MEGDEGVLWSINGEESSNVGKGKWTTIVRVTWRLSEQRVNMWEITWQLRSGGEDIYGKGSSWLREPFEIEFDRTGTSRVSWEKNKLDPLKWAESRPQPMVKGEHETEPRTDHK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..113

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0020099Lag0020099gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0020099.1.exon2Lag0020099.1.exon2exon
Lag0020099.1.exon1Lag0020099.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0020099.1cds.Lag0020099.1_2CDS
cds.Lag0020099.1cds.Lag0020099.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0020099.1Lag0020099.1-proteinpolypeptide