![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lag0016853.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTGCTTTCACTCCTTTTTCTTTCTTCTTCTATATTCCTACTCGAGCTGCAAGGCTAATTTAGCTTAATGGCTATCTCAAATTTTGCAGGTCTCAATCGGTGTGGGAAGAGTTGCAGACTGAGATGGCTGAATTATCTCAGACCTAACATAAAGAGAGGGAATATATCAGATCAAGAGGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTCACATTCTTACCCATTTCACTCTGTAATTTTGTTGTTTTGATTATCTTTCTGTTTCATAATCTGAAGGAGTTTTGGTTTTCTGGGTTGGGGGGTGGGGGTGGTGCCTGATTGGTCTTCTCAGGTGGTCCTTGATTGCTGGGAGACTGCCCGGGCGAACGGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAAATGAACCAACCGAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGAGTAAAAGAAAAGTAGACACAGAGTCAAGGGAAGAGGAAACATCTCAAGAATGTGAAAACAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTGA ATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTCTCAATCGGTGTGGGAAGAGTTGCAGACTGAGATGGCTGAATTATCTCAGACCTAACATAAAGAGAGGGAATATATCAGATCAAGAGGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTGGTCCTTGATTGCTGGGAGACTGCCCGGGCGAACGGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAAATGAACCAACCGAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGAGTAAAAGAAAAGTAGACACAGAGTCAAGGGAAGAGGAAACATCTCAAGAATGTGAAAACAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTGA ATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCAAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTCTCAATCGGTGTGGGAAGAGTTGCAGACTGAGATGGCTGAATTATCTCAGACCTAACATAAAGAGAGGGAATATATCAGATCAAGAGGAAGATTTGATCCTCAGGCTCCATAAACTTCTTGGCAACAGGTGGTCCTTGATTGCTGGGAGACTGCCCGGGCGAACGGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAAATGAACCAACCGAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGAGTAAAAGAAAAGTAGACACAGAGTCAAGGGAAGAGGAAACATCTCAAGAATGTGAAAACAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTGA MTEEDSVKRKVKQVEGDINEAENVRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQPSEKESDILKRKGSKRKVDTESREEETSQECENSSNLEFDVDNLFDFSNEGPDLEWMSKFL Homology
BLAST of Lag0016853.1 vs. NCBI nr
Match: XP_022948466.1 (transcription factor MYB114-like [Cucurbita moschata] >XP_023525819.1 transcription factor MYB114-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.4 bits (960), Expect = 6.0e-100 Identity = 190/195 (97.44%), Postives = 191/195 (97.95%), Query Frame = 0
BLAST of Lag0016853.1 vs. NCBI nr
Match: KAG6606693.1 (Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 374.0 bits (959), Expect = 7.8e-100 Identity = 189/195 (96.92%), Postives = 191/195 (97.95%), Query Frame = 0
BLAST of Lag0016853.1 vs. NCBI nr
Match: XP_038878481.1 (transcription factor MYB3-like [Benincasa hispida]) HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99 Identity = 188/196 (95.92%), Postives = 193/196 (98.47%), Query Frame = 0
BLAST of Lag0016853.1 vs. NCBI nr
Match: XP_022998619.1 (transcription factor MYB114-like [Cucurbita maxima]) HSP 1 Score: 371.3 bits (952), Expect = 5.1e-99 Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of Lag0016853.1 vs. NCBI nr
Match: XP_022153490.1 (transcription factor MYB114-like [Momordica charantia]) HSP 1 Score: 370.9 bits (951), Expect = 6.6e-99 Identity = 185/195 (94.87%), Postives = 191/195 (97.95%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy Swiss-Prot
Match: A0A4D6QCQ2 (Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.2e-44 Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy Swiss-Prot
Match: A0A4D6Q5I0 (Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.5e-42 Identity = 95/179 (53.07%), Postives = 116/179 (64.80%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy Swiss-Prot
Match: P10290 (Anthocyanin regulatory C1 protein OS=Zea mays OX=4577 GN=C1 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 7.7e-42 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy Swiss-Prot
Match: A0A2R6PN00 (Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=MYB123 PE=1 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41 Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 6.5e-41 Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy TrEMBL
Match: A0A6J1G9A5 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 2.9e-100 Identity = 190/195 (97.44%), Postives = 191/195 (97.95%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy TrEMBL
Match: A0A6J1KET2 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99 Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy TrEMBL
Match: A0A6J1DGZ8 (transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99 Identity = 185/195 (94.87%), Postives = 191/195 (97.95%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy TrEMBL
Match: A0A6J1IXC0 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111480008 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 5.6e-96 Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 0
BLAST of Lag0016853.1 vs. ExPASy TrEMBL
Match: A0A6J1GUA9 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95 Identity = 182/196 (92.86%), Postives = 188/196 (95.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|