Lag0005394.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005394.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	elongation of fatty acids protein 3-like
Location	chr6: 16343090 .. 16344005 (+)
Sequence length	873
RNA-Seq Expression	Lag0005394.1
Synteny	Lag0005394.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCCATCACTTTGGCGTGAATCCCACGCTCTGCCGTCTGATCGTTCCCTCTTAATGTCGACGGCGATGTCGCCTAGAATCATGTCGATTACCGATTTCACCTACTGGCTGTCGGAGCACCCCGCCATCGTCGGATTTCGTTGGAGCCACACCCATTCATGGGGCTCCACTTGGTCCTTCCTCTTCTCTTCCATCACCTTTTACTTTGCCTTCTCCACCGCCGTCCATCTCTTCCTCAGCCTCCTCCTCCGCCTTGGCCGTCCTGTCCCTCTCGGCCCCATTATAGCCATCCATTGCCTCTCCATGGCTCTCATCTCCGCCGGGATCCTCCTCTCCTCCGCCACCGAGATTCGCGACACATGGTGGTTCTGGCGGCGTTCCAAAACCCTTTCCAGTGGCTCCTTTGTTTCCCCTTGGGCACTTGCCCTTCTGGCCGCATCTTCTTCTGGTCGTACATCTACTATATATCCCGATTCTTCCATATGTTCCGTACCATCTTCACCATTCTCCGACGACGACGGCTCTCCTTCTTCCAACTCTTCAACCATTCGATTTCGACGTTTATGTCATTCCTATGGCTCGAATTTTCACAATTCTTTCAGGTTCTTGCGATTCTGTTGACTTCGCTGGTGTACGCAGTGGTTTACGGATACAGATTTTGGACGACGATTGGTTTGCGAAGGGCTTGTTTCCCTTTCGTGATAAACTGTCAATTCTTCCTGTTGGATTGCAACCTGGCCTGCCATGTGGGCGTTTTGATGCTGCACTTTATGAAAGGTGGGTGCAACAGAATTGGGGCTTGGGGTTTCAATACGGTGCTCAATGGAGCGATTTTGTTGTTGTTCTTGAACTTCTATCTCAAAATTCGTCTGGGGAAGTCGCAGGATTCTTTAAAGATGATCAAGCTTGA

mRNA sequence

ATGGCTTCCCCATCACTTTGGCGTGAATCCCACGCTCTGCCGTCTGATCGTTCCCTCTTAATGTCGACGGCGATGTCGCCTAGAATCATGTCGATTACCGATTTCACCTACTGGCTGTCGGAGCACCCCGCCATCGTCGGATTTCGTTGGAGCCACACCCATTCATGGGGCTCCACTTGGTCCTTCCTCTTCTCTTCCATCACCTTTTACTTTGCCTTCTCCACCGCCGTCCATCTCTTCCTCAGCCTCCTCCTCCGCCTTGGCCGTCCTGTCCCTCTCGGCCCCATTATAGCCATCCATTGCCTCTCCATGGCTCTCATCTCCGCCGGGATCCTCCTCTCCTCCGCCACCGAGATTCGCGACACATGGTGGTTCTGGCGGCGTTCCAAAACCCTTTCCAGTGGCTCCTTTGTTTCCCCTTGGGCACTTGCCCTTCTGGCCGCATCTTCTTCTGGTCGTACATCTACTATATATCCCGATTCTTCCATATGTTCCGTACCATCTTCACCATTCTCCGACGACGACGGCTCTCCTTCTTCCAACTCTTCAACCATTCGATTTCGACGTTCTTGCGATTCTGTTGACTTCGCTGGTGTACGCAGTGGTTTACGGATACAGATTTTGGACGACGATTGGTTTGCGAAGGGCTTGTTTCCCTTTCGTGATAAACTGTCAATTCTTCCTGTTGGATTGCAACCTGGCCTGCCATGTGGGCGTTTTGATGCTGCACTTTATGAAAGGTGGGTGCAACAGAATTGGGGCTTGGGGTTTCAATACGGTGCTCAATGGAGCGATTTTGTTGTTGTTCTTGAACTTCTATCTCAAAATTCGTCTGGGGAAGTCGCAGGATTCTTTAAAGATGATCAAGCTTGA

Coding sequence (CDS)

ATGGCTTCCCCATCACTTTGGCGTGAATCCCACGCTCTGCCGTCTGATCGTTCCCTCTTAATGTCGACGGCGATGTCGCCTAGAATCATGTCGATTACCGATTTCACCTACTGGCTGTCGGAGCACCCCGCCATCGTCGGATTTCGTTGGAGCCACACCCATTCATGGGGCTCCACTTGGTCCTTCCTCTTCTCTTCCATCACCTTTTACTTTGCCTTCTCCACCGCCGTCCATCTCTTCCTCAGCCTCCTCCTCCGCCTTGGCCGTCCTGTCCCTCTCGGCCCCATTATAGCCATCCATTGCCTCTCCATGGCTCTCATCTCCGCCGGGATCCTCCTCTCCTCCGCCACCGAGATTCGCGACACATGGTGGTTCTGGCGGCGTTCCAAAACCCTTTCCAGTGGCTCCTTTGTTTCCCCTTGGGCACTTGCCCTTCTGGCCGCATCTTCTTCTGGTCGTACATCTACTATATATCCCGATTCTTCCATATGTTCCGTACCATCTTCACCATTCTCCGACGACGACGGCTCTCCTTCTTCCAACTCTTCAACCATTCGATTTCGACGTTCTTGCGATTCTGTTGACTTCGCTGGTGTACGCAGTGGTTTACGGATACAGATTTTGGACGACGATTGGTTTGCGAAGGGCTTGTTTCCCTTTCGTGATAAACTGTCAATTCTTCCTGTTGGATTGCAACCTGGCCTGCCATGTGGGCGTTTTGATGCTGCACTTTATGAAAGGTGGGTGCAACAGAATTGGGGCTTGGGGTTTCAATACGGTGCTCAATGGAGCGATTTTGTTGTTGTTCTTGAACTTCTATCTCAAAATTCGTCTGGGGAAGTCGCAGGATTCTTTAAAGATGATCAAGCTTGA

Protein sequence

MASPSLWRESHALPSDRSLLMSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALISAGILLSSATEIRDTWWFWRRSKTLSSGSFVSPWALALLAASSSGRTSTIYPDSSICSVPSSPFSDDDGSPSSNSSTIRFRRSCDSVDFAGVRSGLRIQILDDDWFAKGLFPFRDKLSILPVGLQPGLPCGRFDAALYERWVQQNWGLGFQYGAQWSDFVVVLELLSQNSSGEVAGFFKDDQA

Homology

[Close]

BLAST of Lag0005394.1 vs. NCBI nr
Match: XP_038880984.1 (elongation of fatty acids protein 3-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-42
Identity = 97/113 (85.84%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 25  MSPRI--MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLS 84
           MSP I  ++I DFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSI FY AFSTAVHLFLS
Sbjct: 1   MSPGIIPININDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTAVHLFLS 60

Query: 85  LLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LLLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 113

[Close]

BLAST of Lag0005394.1 vs. NCBI nr
Match: XP_023518252.1 (elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-41
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. NCBI nr
Match: XP_023004077.1 (elongation of fatty acids protein 3-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-41
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLL
Sbjct: 1   MQAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. NCBI nr
Match: KAG6595084.1 (Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-41
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. NCBI nr
Match: XP_022962893.1 (elongation of fatty acids protein 3-like [Cucurbita moschata])

HSP 1 Score: 178.3 bits (451), Expect = 9.3e-41
Identity = 92/111 (82.88%), Postives = 94/111 (84.68%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A S A+HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 21  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLF 80
           MSTA+      I   TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y A S+++H+ 
Sbjct: 1   MSTAL------INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHIL 60

Query: 81  LSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSATEIRDTWWFWRRSKT 132
           LS + R  R VPLG I  IH L M+++S    AGILLS+A EIRDT W WRRSKT
Sbjct: 61  LSAVRRSNRSVPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKT 109

[Close]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL
Match: A0A6J1KPE4 (elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497497 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.1e-42
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLL
Sbjct: 1   MQAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL
Match: A0A6J1HG46 (elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463259 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.5e-41
Identity = 92/111 (82.88%), Postives = 94/111 (84.68%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A S A+HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL
Match: A0A1S3B0F3 (elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.9e-40
Identity = 91/111 (81.98%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           MSP I+ I DFTYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFSTA+HLFL+LL
Sbjct: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTALHLFLTLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GR VPLGPI AIH LSMA    LISAGILLSS  EIRDT WFWRRSKT
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL
Match: A0A6J1BT67 (elongation of fatty acids protein 3-like OS=Momordica charantia OX=3673 GN=LOC111005330 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-39
Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0


Query: 30  MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGR 89
           M I D TYWLSEHP+IVGFRWSH+HSWGSTWSFLFSSI FY  FSTA+HLFL LLLR GR
Sbjct: 1   MPIKDLTYWLSEHPSIVGFRWSHSHSWGSTWSFLFSSIAFYLVFSTALHLFLCLLLRPGR 60

Query: 90  PVPLGPIIAIHCLSM----ALISAGILLSSATEIRDTWWFWRRSKT 132
           PVPLGPI AIHCLSM    ALISAGILLSSA EIRDT WFWRRSKT
Sbjct: 61  PVPLGPIPAIHCLSMALISALISAGILLSSAAEIRDTRWFWRRSKT 106

[Close]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL
Match: A0A0A0KL12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 89/111 (80.18%), Postives = 93/111 (83.78%), Query Frame = 0


Query: 25  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLL 84
           MS  I+ I DFTYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A STA+HLFL+LL
Sbjct: 1   MSSGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLL 60

Query: 85  LRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIRDTWWFWRRSKT 132
           LR GR VPLGPI AIH LSMA    LISAGILLSS  EIRDT WFWRRSKT
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKT 111

[Close]

BLAST of Lag0005394.1 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-28
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 21  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLF 80
           MSTA+      I   TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y A S+++H+ 
Sbjct: 1   MSTAL------INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHIL 60

Query: 81  LSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSATEIRDTWWFWRRSKT 132
           LS + R  R VPLG I  IH L M+++S    AGILLS+A EIRDT W WRRSKT
Sbjct: 61  LSAVRRSNRSVPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKT 109

[Close]

BLAST of Lag0005394.1 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 102.1 bits (253), Expect = 7.9e-22
Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 32  ITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLG--- 91
           +T F Y+L+EHP IV FRWS T S+ STWSFLF++++ Y   +  +HL L + L L    
Sbjct: 1   MTTFNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRR 60

Query: 92  RPVPLGPIIAIHCLSMALISA----GILLSSATEIRDTWWFWRRSKT 132
           R   LGPI A+H L++++ISA    GILLS+A EIRDT W WRR++T
Sbjct: 61  RGFSLGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRT 107

[Close]

BLAST of Lag0005394.1 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 42.4 bits (98), Expect = 7.5e-04
Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 36  TYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGP 95
           TYWL  HP I  F W+   + GST  F+F  ++ Y + +  +   +  L  LG P  L P
Sbjct: 9   TYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLG-PRILKP 68

Query: 96  IIAIHCLSMALIS 109
           I A+H L + L+S
Sbjct: 69  ITAVHSLILFLLS 80

The following BLAST results are available for this feature:

BLAST of Lag0005394.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880984.1	2.2e-42	85.84	elongation of fatty acids protein 3-like [Benincasa hispida]	[more]
XP_023518252.1	1.9e-41	83.78	elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004077.1	1.9e-41	83.78	elongation of fatty acids protein 3-like [Cucurbita maxima]	[more]
KAG6595084.1	1.9e-41	83.78	Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022962893.1	9.3e-41	82.88	elongation of fatty acids protein 3-like [Cucurbita moschata]	[more]

BLAST of Lag0005394.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYY4	4.7e-27	59.13	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]

BLAST of Lag0005394.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPE4	9.1e-42	83.78	elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HG46	4.5e-41	82.88	elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3B0F3	2.9e-40	81.98	elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706...	[more]
A0A6J1BT67	2.5e-39	83.02	elongation of fatty acids protein 3-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KL12	1.2e-38	80.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1	[more]

BLAST of Lag0005394.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36830.1	3.3e-28	59.13	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	7.9e-22	51.40	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	7.5e-04	36.99	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 34..130
None	No IPR available	PANTHER	PTHR11157:SF11	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 34..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0005394	Lag0005394	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0005394.1.exon1	Lag0005394.1.exon1	exon
Lag0005394.1.exon2	Lag0005394.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0005394.1	cds.Lag0005394.1	CDS
cds.Lag0005394.1	cds.Lag0005394.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0005394.1	Lag0005394.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity