IVF0026931.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0026931.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Location	chr03: 21971464 .. 21974309 (-)
Sequence length	1324
RNA-Seq Expression	IVF0026931.2
Synteny	IVF0026931.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTTCTCAAATCTCATACCCATGAATCGAAATCCTAAATATTTGGCTTCAAAGTCCAAAGAAAGCAAATTTTTATACCCTTTAACCAAAATAGTTCATTGTTGAAGCAAATAATGTTTTAACTTTTGGAAGTATAAAATTATCGAGAAATATCACAACTGAAAAAGTTGGATAGAAGAGAAAAAAGGTGAATAGAGACACACTGGCACCGCCCTCTACATTCTCTTCCTCACTAGAAATCTCCATTGTCCCATAATTCTCTTTTTTTTTCTCTCTCTTTCTCGGTTTTGCCACTTCTCTTAAATCCACTATTCTTCTCTTCTCTCATCTATCCTCTCTCAGAATCTTTCCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTAAGCTTCTGGAATCTTTATTTTCATTTCTTGGTTTTGTTTACTGGCTTCCATTTGAAGTTTTTCTGCAGCTTAAATTGAGGTTTTACACAAGAATCGTTGAAACCCTCTAAAGGGTTTCAAGAAATCAGTGGAAATTAGAAAACAAACTGTTGGGTTAATTTTTTTTTTTTGAAATTTCTGATGAACCCTTTTTCTGGAATCTTGTTTAGGTGCCACTTATTGCATTTGTAAAGACGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTAGTCAAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTCAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGGTATTGGACTTTTGTTTTCCATTTATACTCGTCTTCTTCATCAATTGGTTCGTTTTTTTTTGTTACTTAACATTTCTTTTGGATCTTTTCTTGTTTTCTTGTGTTTTTTCTTTTACAGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACCCAGTTCAATTTCTTCACTCTCTTTCAGTTTTTGAAGAATTAATCACATTCAACTTTTTAGATTGTGTTTTTCTGTTCAACAATGTTCTTAATGGAAAGTAGTTGAATGTTTTGTTTATTAGGAAACAAAGACTACCTCAGATGTTTTGGATTAGTTGAAATTTGAAAAGGTTTAAGGAAAAGTAAAGCACTGGTCTCGTAAACAATCCTCAAATATCTCCATTTTTTTACTGAGAATTTGTTTCTCAAAGTGGCATATTCCAATGACTTTTTTTTTAACCCAAAGCTATCTTTTTTTTTCTTTAACTTTTCGAGTTGGTGTTGGTGAGAATCTTCTGCCTGATGTAAGAAAAGAAAAGAAACTTAAAAAAAAAAATCTATCAAGAATCCAATTCCCTTCCCCTTCTTTCTCAATGATCAAGCTTGGCTTTATTGAATATCTTTTCCCCTTGGAAAGTTACAATTGTTGAAAACGTAATCTATATGGAAAAATGTTTTTGTAATATATTACTTTGGATGAAAATTATCTTACGGGGAGAATCTGTTAACAAGTTAACTCTTAGTTTTACAGTCTCTCTCTCACAGCTTCTAAACAATAGAGATGATCTATTAATATCATTGATAATGTCTAAAACCACTTCTTCTAATTGTTGCAACTTGCTAGACTAAGAATACAAGCTGTCTGATGTTGATACGGTTTTTCTATGTCATCTCTGTCCTCTTCTTCTCCAAGATAATAACTCTATTGCTACACACCTGTCTTCTAGATGTGCTTTCATTTTAGATGATCCATATCTACTTCTCTTTTTTGTCCAATGAAAAAGTTTACCATTCAAGTTTGCACTGATGACAGTCACGAACAAATCAAATGCCATTAAAATGTTAAGGTAATATTAAAGTTTCATTCATCCATCAACTTAAGCTTTTAAGTCAATCGGTGATTTAAACTTAAGCTTTTAAGTCAATCGGTGATTTAACTTGGTATTACAAAAGTGTGTCTTGTGTTCAAACCCCTACAATGATATTTTCACTTGTTTTGGGTCTTCTACAAATCCCTAAGCTCACAAGCATGTGAGAGAGTAGTGTTGATATAATATTAAATTTATTGTCATCCATCAACTTAAGCTTTTAAGTCAACCAATGATTTAACAAACACTCATTTCTGTTTTCCTTTCCCCTTCTTTTCAGTTTCACAGGTACCCGACTACCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACGCCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCGGGCACAACCTCCCCTTCAGTGTTCGGGGGTGGAATAAGCCCAACAGGCGGCGTCGGTCTTGGTGGGAATACTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACCTGTTCTTCTTCACCGCTACTGTGACATTTTGGTTTTCAATGTTCTGTTAGGTTAACCATGACGGAGGCCATTAGTTGATTTCTTTGGATGGATGGATGAAAGGAAAAGCTAGGAAGGTTGTTTTCTAATGTCCTTCGATGTGGAAAAGAAAAAAAAAAAAAAAGAAAAGAAAGAAAAGAAAAGGGTGGAGAATTTGATTCCTTATTGAGTGGTGGTATGATTTTCTACTAGAATGGAACCTGATCCTCTTAGATATTTTTCACTTTTGTGTATCTAATAGAGGCTGTATTTTCCTTAATTTAATGGGACTTTGTACCCACTAATCAATAATTCTGCTCTGTTGTTCATTATTAATTTCTTCATTTGATAATAAAGTCTTATGAGTTGTGTTACTCAA

mRNA sequence

AAAACTTTCTCAAATCTCATACCCATGAATCGAAATCCTAAATATTTGGCTTCAAAGTCCAAAGAAAGCAAATTTTTATACCCTTTAACCAAAATAGTTCATTGTTGAAGCAAATAATGTTTTAACTTTTGGAAGTATAAAATTATCGAGAAATATCACAACTGAAAAAGTTGGATAGAAGAGAAAAAAGGTGAATAGAGACACACTGGCACCGCCCTCTACATTCTCTTCCTCACTAGAAATCTCCATTGTCCCATAATTCTCTTTTTTTTTCTCTCTCTTTCTCGGTTTTGCCACTTCTCTTAAATCCACTATTCTTCTCTTCTCTCATCTATCCTCTCTCAGAATCTTTCCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTGCCACTTATTGCATTTGTAAAGACGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTAGTCAAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTCAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCGACTACCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACGCCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCGGGCACAACCTCCCCTTCAGTGTTCGGGGGTGGAATAAGCCCAACAGGCGGCGTCGGTCTTGGTGGGAATACTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACCTGTTCTTCTTCACCGCTACTGTGACATTTTGGTTTTCAATGTTCTGTTAGGTTAACCATGACGGAGGCCATTAGTTGATTTCTTTGGATGGATGGATGAAAGGAAAAGCTAGGAAGGTTGTTTTCTAATGTCCTTCGATGTGGAAAAGAAAAAAAAAAAAAAAGAAAAGAAAGAAAAGAAAAGGGTGGAGAATTTGATTCCTTATTGAGTGGTGGTATGATTTTCTACTAGAATGGAACCTGATCCTCTTAGATATTTTTCACTTTTGTGTATCTAATAGAGGCTGTATTTTCCTTAATTTAATGGGACTTTGTACCCACTAATCAATAATTCTGCTCTGTTGTTCATTATTAATTTCTTCATTTGATAATAAAGTCTTATGAGTTGTGTTACTCAA

Coding sequence (CDS)

ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTGCCACTTATTGCATTTGTAAAGACGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTAGTCAAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTCAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCGACTACCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACGCCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCGGGCACAACCTCCCCTTCAGTGTTCGGGGGTGGAATAA

Protein sequence

MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPPPHQPLHQPPFPARRQEPQQTHQQHHRRQQLRAQPPLQCSGVE

Homology

[Close]

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-32
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC  I Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPPP 120
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA  S S P+  + C +P+S S +GT  P  
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPASASGSGTTTPVT 120

Query: 121 HQPLHQPP 129
             P  + P
Sbjct: 121 TTPSTRVP 126

[Close]

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.9e-28
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           M+VLL   LI   FT +S+A YC+CK+G ++Q LQK++DYACG GADC+QI   G C+QP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPP 120
           NTVK+HC  AVNSY+Q+K     +CDF+G A PS +PP+ AS C+  SS S T T   P
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTGTP 117

[Close]

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-27
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC+       CF P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPS 112
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA P+ S P+  +GC +P+S S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTSAS 109

[Close]

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.6e-27
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 5   LLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTVK 64
           L+ YL+ L    H+SA++C+CK GLSD  LQK+LDYACG GADC+     G CF P+ V+
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPS 112
            HC+YAVNS+FQ+KGQ   SC+F+GTA  + + P+  +GC +PSS S
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSY-TGCAFPSSAS 109

[Close]

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 58/115 (50.43%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLL  +L+   FT +S+A  C+CKD  ++  LQK +D+ACG GADC+QI   G C+QP
Sbjct: 1   MAVLLPLFLLSFMFT-YSNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 116
           NT+K+HC  AVNSY+Q+K     +CDF+G A+ S SPP+  S C+  SS + T T
Sbjct: 61  NTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLSSSSSNGTPT 113

[Close]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.9e-59
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 116
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.9e-59
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 116
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.3e-57
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 116
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.4e-52
Identity = 103/120 (85.83%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPPP 120
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PS SPPA ASGCVYPSSPS TGT    P
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSPSGTGTPTTTP 120

[Close]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLC+LIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 116
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTAM SQSPP  ASGCVY SS S TGT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGT 115

[Close]

BLAST of IVF0026931.2 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (601), Expect = 3.62e-76
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 232 bits (592), Expect = 7.42e-75
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTAILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus])

HSP 1 Score: 229 bits (583), Expect = 1.98e-73
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSPSFTGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGT 115

[Close]

BLAST of IVF0026931.2 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia])

HSP 1 Score: 214 bits (546), Expect = 8.34e-68
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PS SPPA ASGCVYPSSPS TGT
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSPSGTGT 115

[Close]

BLAST of IVF0026931.2 vs. NCBI nr
Match: KAG7029572.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209 bits (533), Expect = 6.50e-66
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGT 115
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTAM SQSPP  ASGCVY SS S TGT
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSSNTGT 115

[Close]

BLAST of IVF0026931.2 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC  I Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPPP 120
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA  S S P+  + C +P+S S +GT  P  
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPASASGSGTTTPVT 120

Query: 121 HQPLHQPP 129
             P  + P
Sbjct: 121 TTPSTRVP 126

[Close]

BLAST of IVF0026931.2 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33
Identity = 71/128 (55.47%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTV 63
           LLL  L  LA T++SSATYC+C+DG+ ++ LQ S+DYACG   DC+ I + GPC+QPNT+
Sbjct: 3   LLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQS-PPAVASGCVYPSSPSFTGTRLPPPHQ 123
           K HC +AVN+YFQR GQ+ GSC+FSGTA  SQ+ P  V +GC+YPSSP   GT  P    
Sbjct: 63  KSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSPGSAGT-TPTTGT 122

Query: 124 PLHQPPFP 131
           P     FP
Sbjct: 123 PSGTQTFP 129

[Close]

BLAST of IVF0026931.2 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.6e-32
Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTV 63
           +LL  L+ L+ T+ SSA YC+CKDG+ D  LQ S+DYACG  ADC+ I   G C+QP+T+
Sbjct: 3   VLLGLLLLLSLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPA-VASGCVYPSSPSFTGTRLPPPHQ 123
           K HC +AVNSYFQ   QV GSC+FSGTA  + +PP+ +A+GC+YPSSPS   TR PP   
Sbjct: 63  KSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSPS--STRSPPSTT 121

[Close]

BLAST of IVF0026931.2 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 )

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           M+VLL   LI   FT +S+A YC+CK+G ++Q LQK++DYACG GADC+QI   G C+QP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTRLPP 120
           NTVK+HC  AVNSY+Q+K     +CDF+G A PS +PP+ AS C+  SS S T T   P
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTGTP 117

[Close]

BLAST of IVF0026931.2 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 122.5 bits (306), Expect = 3.1e-28
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC+       CF P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPS 112
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA P+ S P+  +GC +P+S S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTSAS 109

The following BLAST results are available for this feature:

BLAST of IVF0026931.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	1.6e-32	57.81	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q93V72	8.9e-28	54.62	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]
Q9FNQ2	4.4e-27	54.05	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9SD84	7.6e-27	53.27	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FZD0	1.6e-24	50.43	Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370...	[more]

BLAST of IVF0026931.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8S9	5.9e-59	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BDH0	5.9e-59	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0KDN8	7.3e-57	96.52	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=...	[more]
A0A6J1BPT8	2.4e-52	85.83	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1HDW5	1.7e-50	88.70	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of IVF0026931.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445454.1	3.62e-76	100.00	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA00647...	[more]
XP_038886488.1	7.42e-75	98.26	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]	[more]
XP_004144176.1	1.98e-73	96.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMO...	[more]
XP_022131475.1	8.34e-68	88.70	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]	[more]
KAG7029572.1	6.50e-66	89.57	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of IVF0026931.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18650.1	1.1e-33	57.81	plasmodesmata callose-binding protein 3	[more]
AT2G03505.1	1.5e-33	55.47	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G13830.1	3.6e-32	56.20	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G69295.1	6.3e-29	54.62	plasmodesmata callose-binding protein 4	[more]
AT5G61130.1	3.1e-28	54.05	plasmodesmata callose-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 21..106 e-value: 2.6E-40 score: 149.9
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 22..92 e-value: 3.7E-21 score: 75.6
None	No IPR available	GENE3D	1.20.58.1040		coord: 15..108 e-value: 1.0E-9 score: 40.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..161
None	No IPR available	PANTHER	PTHR31044:SF95	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1	coord: 1..123
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 1..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0026931	IVF0026931	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026931.2-exon	IVF0026931.2-exon-chr03:21971464..21972095	exon
IVF0026931.2-exon	IVF0026931.2-exon-chr03:21973288..21973324	exon
IVF0026931.2-exon	IVF0026931.2-exon-chr03:21973443..21973682	exon
IVF0026931.2-exon	IVF0026931.2-exon-chr03:21973895..21974309	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026931.2-three_prime_utr	IVF0026931.2-three_prime_utr-chr03:21971464..21971941	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026931.2-cds	IVF0026931.2-cds-chr03:21971942..21972095	CDS
IVF0026931.2-cds	IVF0026931.2-cds-chr03:21973288..21973324	CDS
IVF0026931.2-cds	IVF0026931.2-cds-chr03:21973443..21973682	CDS
IVF0026931.2-cds	IVF0026931.2-cds-chr03:21973895..21973949	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026931.2-five_prime_utr	IVF0026931.2-five_prime_utr-chr03:21973950..21974309	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0026931.2	IVF0026931.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma