IVF0026293.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0026293.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CSL zinc finger domain-containing protein
Location	chr05: 1650368 .. 1652899 (+)
Sequence length	1046
RNA-Seq Expression	IVF0026293.1
Synteny	IVF0026293.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTGATTCCTCTTTCAAAGGGCCTCCGGAAAGCCTTCCAATTATGGCGACGGTGAGAGTCTTCGTAACAATGCCGATGAAGCTTCTGCTGCTGTTGCTAATGGTTCTGATACTTGTTGTTCACTCTGAAGCTGCAAATACGAACAATGTATACCAACCTTGTGCGGACACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCTTTCTTCTCTAACCAGTCTCATCAGCTCTCCCCGTGTGACCGTCGTCTTTCTCTTGCCTCGCTTAACTCACAGCTGGCAGTTTTTAGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGTATACTAACTCGATCTTGATTTTATGTATCTGATTGTTTCCGTTACTTATGCAGATCAGTGTAGTTTAGTTTCTAATTTAATCGATGTTTTTTTTTTCTTTCTCATTTGTGGAAGTTGGTAGAATTAGGTTATGTTATTGTTTTCACGAGGATTTTAACTTATGAGTCTGTTTTTTTAAAGAAGATTGAGAGAAATGAATGGTTTTCGGTATATTGATTGGTGAAGAACTTGAAATTACACATAGAGGTGAGGTAGATAAGCCTCTTAAATACACAACTAATTAGCGATGGATTAGGTACTAAACTAATTCTAATAAATGGTAAGTTAAGATAAACGAGTAAAGTTACTAATAGTAATACTAATAAGTACAGTAAACAGATAAATGATTATGCCTTAACATTATGGATTCTTGACGTTACTTTATTCTCTGGATTGGATGGCCCTATTGTGAAATCATATATTATTTGGTCGTAGTTTTAGCAATATTATGCTATAGTGTCCTGTCTCTTGCTAACAGATTATGCTTTGGTATGACTTTTGAGTTCGAAATCTTGTTTGACGAAATGTACTAGACTTTAGTGGATGAAACTAGATTGACAGTATACTTGTTCGTCATCATCGCTTCCTTCTCTTTACTTGGTTTGAATTTAAAATGTTGTTTGATTAGATGGTTCATGGAGAAAATTAGATAGATGTCATCTTCATGGTCTTCATTCTTGGTTCCATCTCTTAGTCGGTTATAACCTTACAATCAATTCCATTGAATCTCGTCCATGAATATGGTATCTCATTTGACGAAATATGTCCAATGTCCATTGGGGAAAATAGATTATGAGTTATGGTACTGATCTTCATGTGACATTTATTGAATGATGAAAATTTACAGTTATATTCATAACCGATGAATTAATTTTATATCAATTCCCCTTCAGGTTGCAATTGCAATTTCTTAGAGTTATTGAAGTGCGAGGACCAAAATCGTGTAATGGCATTTGATTAATTAGGAAAGGAGGTTTTTATGTTGGCCATTTAACTTAGAATTTAATTTCTTTTACAAGTTTTCCTAACACTAGAATACCATTAGATTAGGTGGATTTGTCCGGAAGCTGGTATAATATTAAATTTACCTTCATCCATCGGCTTAGTCATGAAATTAGTTAAAGTGCACACAAATGCAACTATTAATAGAAAAAAGAGGCGAAGGAGGGTTCTTATAGTGTTATTAAATGCGGATCCCTACTTGTGCGGATCCCTAGTTGTTTCAAAAGAATTCCCTGCTTCTTAATGCAACATCACCATAATTAGTAGAAATGGCCATAATGCTTAATGCCTTGGAATTTTCAGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCCGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTCGTCGCTAATAACACATTCATAGTGACGAGTTTCACCCTGGTAAGATTCAAAATTTGGTAACTGTAAAGTAGATACTAGAGAAGTTGTAGGTTTTGTTAGCAAAATCAAACCAATCTGATGAATTCCTACTAAAAAAAACTAAGCATTCTGATGAATGAAATGGAATTTGGTGGGAGCAGGTACTCGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCCATTAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTGCAGCGCTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTATATAGTGTGTATTCAAATCTCAGGGATTCTCTTACCAGCCAGTACAACAGGTTCTTCTAATTACTTATTCATCATACTCCTCTCAAGGTCTGTTGTTTTATAACTTCTATACATTATACTGTTTATCATGGTCTCCCTTCTTGGCTTTGTTATACATCCTTTTTGGCTCCCTTCCTTTGTATGGGACATCCCATATGAAGATCTCTTTGGACTAATGATGTTCGAAGAATGGGGTTAATTGGATAGTTAGTTAATATTATAAGTTTTTTTAACCCCCTTTTCTTCTTACCTCAACTGATTACTACCATCT

mRNA sequence

TCCTGATTCCTCTTTCAAAGGGCCTCCGGAAAGCCTTCCAATTATGGCGACGGTGAGAGTCTTCGTAACAATGCCGATGAAGCTTCTGCTGCTGTTGCTAATGGTTCTGATACTTGTTGTTCACTCTGAAGCTGCAAATACGAACAATGTATACCAACCTTGTGCGGACACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCTTTCTTCTCTAACCAGTCTCATCAGCTCTCCCCGTGTGACCGTCGTCTTTCTCTTGCCTCGCTTAACTCACAGCTGGCAGTTTTTAGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCCGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTCGTCGCTAATAACACATTCATAGTGACGAGTTTCACCCTGGTACTCGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCCATTAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTGCAGCGCTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTATATAGTGTGTATTCAAATCTCAGGGATTCTCTTACCAGCCAGTACAACAGGTTCTTCTAATTACTTATTCATCATACTCCTCTCAAGGTCTGTTGTTTTATAACTTCTATACATTATACTGTTTATCATGGTCTCCCTTCTTGGCTTTGTTATACATCCTTTTTGGCTCCCTTCCTTTGTATGGGACATCCCATATGAAGATCTCTTTGGACTAATGATGTTCGAAGAATGGGGTTAATTGGATAGTTAGTTAATATTATAAGTTTTTTTAACCCCCTTTTCTTCTTACCTCAACTGATTACTACCATCT

Coding sequence (CDS)

ATGGCGACGGTGAGAGTCTTCGTAACAATGCCGATGAAGCTTCTGCTGCTGTTGCTAATGGTTCTGATACTTGTTGTTCACTCTGAAGCTGCAAATACGAACAATGTATACCAACCTTGTGCGGACACTAAGATTCAGAGATCCGATGGATTCACCTTCGGAATCGCATTCTCTTCCAGAGACTCTTTCTTCTCTAACCAGTCTCATCAGCTCTCCCCGTGTGACCGTCGTCTTTCTCTTGCCTCGCTTAACTCACAGCTGGCAGTTTTTAGACCTAGAGTAGACCAGATCTCACTTCTCTCCATCAATACTTCCGATTTCTTTCCGGATGCTTTTGGTGGTTACATGGTGGCTTTTGCCGGAAGAAAGTACGCTGCAAGGTCTCAGCCTGCATTCGTCGCTAATAACACATTCATAGTGACGAGTTTCACCCTGGTACTCGAGTTTCAAAAGGGCAGGCTGCAGAACTTGTACTGGAAACGAGATGGATGTGCTTCATGCTCAGGTAAGTCGAGATCTAGTTATGTCTGCCTTAATAATCAGGATTGTGCCATTAGAACATCGAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTTACGTTTTCAGGCACGGATAAGCATCTTGCAGCGCTGAACTCCTGGTATGAAGTAAAAAATCTTCGACAATATTCCCTATATAGTGTGTATTCAAATCTCAGGGATTCTCTTACCAGCCAGTACAACAGGTTCTTCTAA

Protein sequence

MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSLTSQYNRFF

Homology

[Close]

BLAST of IVF0026293.1 vs. ExPASy TrEMBL
Match: A0A1S3BNB9 (uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 7.9e-135
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240

Query: 241 SLTSQYNRFF 251
           SLTSQYNRFF
Sbjct: 241 SLTSQYNRFF 250

[Close]

BLAST of IVF0026293.1 vs. ExPASy TrEMBL
Match: A0A0A0KEG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-128
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVR+F T+P K LLLLLM LI+VVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 14  MATVRLFATLPKK-LLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 73

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF+NQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 74  DSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 133

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN+TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 134 GRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 193

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLY+VYSNLRD
Sbjct: 194 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRD 253

Query: 241 SLTSQYNRFF 251
           SLT QYNRFF
Sbjct: 254 SLTGQYNRFF 262

[Close]

BLAST of IVF0026293.1 vs. ExPASy TrEMBL
Match: A0A6J1JBU3 (uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 232/250 (92.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVT+PM+LLLLL   + L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTVPMELLLLL---MALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFA
Sbjct: 61  DSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMD 240

Query: 241 SLTSQYNRFF 251
           SLT QYNRFF
Sbjct: 241 SLTGQYNRFF 247

[Close]

BLAST of IVF0026293.1 vs. ExPASy TrEMBL
Match: A0A6J1FS19 (uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC111448296 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 232/250 (92.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVT+PM+LLLLL   + L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTVPMELLLLL---MALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFA
Sbjct: 61  DSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMD 240

Query: 241 SLTSQYNRFF 251
           SLT QYNRFF
Sbjct: 241 SLTGQYNRFF 247

[Close]

BLAST of IVF0026293.1 vs. ExPASy TrEMBL
Match: A0A6J1DHN7 (uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020583 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 227/250 (90.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MAT+RVFVT PM+LLLLL+ +L+   HSEAANTNNVYQPCADTKIQRSDGF+FGIAFSSR
Sbjct: 1   MATMRVFVTAPMELLLLLVALLL---HSEAANTNNVYQPCADTKIQRSDGFSFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSL SLNSQLAVFRPRVD+ISLL+INTSDFFPD+FGGYMVAFA
Sbjct: 61  DSFFFNQSHQLSPCDRRLSLPSLNSQLAVFRPRVDEISLLTINTSDFFPDSFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN+TFIVTSFTLVLEF+KGRLQNL+WKRDGC+SCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANSTFIVTSFTLVLEFEKGRLQNLFWKRDGCSSCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGG VDCSLGIQLTFSGTDKHL ALNSWYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGTVDCSLGIQLTFSGTDKHLTALNSWYEVKNLRQYSLYSVYSNLMD 240

Query: 241 SLTSQYNRFF 251
           SLTSQYNRFF
Sbjct: 241 SLTSQYNRFF 247

[Close]

BLAST of IVF0026293.1 vs. NCBI nr
Match: XP_008449601.1 (PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo])

HSP 1 Score: 489 bits (1258), Expect = 5.16e-174
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240

Query: 241 SLTSQYNRFF 250
           SLTSQYNRFF
Sbjct: 241 SLTSQYNRFF 250

[Close]

BLAST of IVF0026293.1 vs. NCBI nr
Match: XP_004140172.1 (uncharacterized protein LOC101221211 [Cucumis sativus] >KGN48055.1 hypothetical protein Csa_003088 [Cucumis sativus])

HSP 1 Score: 468 bits (1203), Expect = 1.94e-165
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVR+F T+P KLL LLLM LI+VVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 14  MATVRLFATLPKKLL-LLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 73

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF+NQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA
Sbjct: 74  DSFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 133

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN+TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 134 GRKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 193

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALNSWYEVKNLRQYSLY+VYSNLRD
Sbjct: 194 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRD 253

Query: 241 SLTSQYNRFF 250
           SLT QYNRFF
Sbjct: 254 SLTGQYNRFF 262

[Close]

BLAST of IVF0026293.1 vs. NCBI nr
Match: XP_038900700.1 (uncharacterized protein LOC120087841 [Benincasa hispida])

HSP 1 Score: 462 bits (1189), Expect = 4.53e-163
Identity = 235/249 (94.38%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 2   ATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 61
           AT+R FVT+PMKLLLLL+    L+VHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 32  ATMRFFVTVPMKLLLLLMP---LIVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 91

Query: 62  SFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 121
           SFFSNQSHQLSPCDRRLSLA+LNSQLAVFRPRVD+ISLLSINTSDFFPDAFGGYMVAFAG
Sbjct: 92  SFFSNQSHQLSPCDRRLSLAALNSQLAVFRPRVDEISLLSINTSDFFPDAFGGYMVAFAG 151

Query: 122 RKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 181
           RKYAARSQPAFVAN+TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 152 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 211

Query: 182 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDS 241
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNL DS
Sbjct: 212 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLMDS 271

Query: 242 LTSQYNRFF 250
           LT QYNRFF
Sbjct: 272 LTGQYNRFF 277

[Close]

BLAST of IVF0026293.1 vs. NCBI nr
Match: XP_022943561.1 (uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 uncharacterized protein LOC111484349 [Cucurbita maxima])

HSP 1 Score: 457 bits (1176), Expect = 1.46e-161
Identity = 232/250 (92.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVT+PM+LLLLL+    L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTVPMELLLLLMA---LMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFA
Sbjct: 61  DSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMD 240

Query: 241 SLTSQYNRFF 250
           SLT QYNRFF
Sbjct: 241 SLTGQYNRFF 247

[Close]

BLAST of IVF0026293.1 vs. NCBI nr
Match: KAG7010325.1 (hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456 bits (1173), Expect = 4.19e-161
Identity = 231/250 (92.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVT+PM+LLLLL+    L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTVPMELLLLLMA---LMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFA
Sbjct: 61  DSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN TFIVTSFTLVLEFQKG+LQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANGTFIVTSFTLVLEFQKGKLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMD 240

Query: 241 SLTSQYNRFF 250
           SLT QYNRFF
Sbjct: 241 SLTGQYNRFF 247

[Close]

BLAST of IVF0026293.1 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 354.8 bits (909), Expect = 5.8e-98
Identity = 176/248 (70.97%), Postives = 209/248 (84.27%), Query Frame = 0


Query: 6   VFVTMPMKLLLLLLMVLILVVHSE---AANTNNVYQPCADTKIQRSDGFTFGIAFSSRDS 65
           +F +  + LL+   ++L + +  +   + NTN +Y PC+DT+IQRSDGFTFGIAFSSR S
Sbjct: 1   MFSSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPS 60

Query: 66  FFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGR 125
           FF NQ+  LSPCDRRLSLA++NSQ +VFRP++D+ISLLSINTS FFPD +GGYMVAFAGR
Sbjct: 61  FFINQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGR 120

Query: 126 KYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQD 185
           KYAARS PAF+AN+TFIVTSFTLV+EFQKGRLQNLYWKRDGCASC G    ++VCLN QD
Sbjct: 121 KYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKG--NQNFVCLNKQD 180

Query: 186 CAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSL 245
           CAIRT SC+ RGG VDCSLGIQL FSGTDKHLA LNSWYEV+NL+QYSLY +YSNL+ SL
Sbjct: 181 CAIRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSL 240

Query: 246 TSQYNRFF 251
           T+Q+N FF
Sbjct: 241 TNQFNNFF 246

[Close]

BLAST of IVF0026293.1 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 286.6 bits (732), Expect = 2.0e-77
Identity = 146/243 (60.08%), Postives = 185/243 (76.13%), Query Frame = 0


Query: 14  LLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFS---NQSHQ 73
           LL  L   ++    +EA + N VY PC+D+ +   DGFTFGIAF+++DSFFS   ++S Q
Sbjct: 6   LLCCLFAAVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQ 65

Query: 74  LSPCDRRLSLASLNSQLAVFRPRVDQISLLSINT---SDFFPDAFGGYMVAFAGRKYAAR 133
            SPCD R    + NS++AVFRP+VD+I+LL+INT   S F PDA  GYMVAFAG KYAAR
Sbjct: 66  YSPCDHRHLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAAR 125

Query: 134 SQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRT 193
           S P  VA++  IVTSFTLVLEFQKGRL+N++WK+DGC+ CSG S+  +VCLN ++CAI+ 
Sbjct: 126 SLPIMVADSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSK--FVCLNKEECAIKP 185

Query: 194 SSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSLTSQYN 251
            +C+N+GG VDCSLGIQL FSGTDKH  ALNSWYEV NL+QYSLY +YSNL+DSLT+ + 
Sbjct: 186 QNCKNQGGQVDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFK 245

[Close]

BLAST of IVF0026293.1 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.8e-67
Identity = 131/239 (54.81%), Postives = 173/239 (72.38%), Query Frame = 0


Query: 16  LLLLMVLILVVHS--EAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFSNQSHQLSP 75
           ++++M+++++V     AA+ N VY PC+DT+I + DGFT GIA SS+++FF +Q  QLSP
Sbjct: 126 IMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQV-QLSP 185

Query: 76  CDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAGRKYAARSQPAFV 135
           CD RL LA+  +QLA+FRP+VD+ISLLSI+TS F P   GG+MV FAG KYAARS P  V
Sbjct: 186 CDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKV 245

Query: 136 ANNTFIVTSFT---------LVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCA 195
           A+ +  +T+FT         LVLEFQKG LQNL+WK  GC  C G   SS VCLN  DCA
Sbjct: 246 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 305

Query: 196 IRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRDSLT 244
           + TS C+  GG  +C++GIQ+ FSGTD++L +LN+WYEV NLRQYSL  +Y+N  DSL+
Sbjct: 306 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]

BLAST of IVF0026293.1 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-13
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 115 YMVAFAGRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCA 166
           Y V   G +  +   PAF+AN+TFIVTSFT V+EFQKGRLQNLYWKRD CA
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCA 52

The following BLAST results are available for this feature:

BLAST of IVF0026293.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0026293.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNB9	7.9e-135	100.00	uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=...	[more]
A0A0A0KEG2	2.5e-128	95.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1	[more]
A0A6J1JBU3	2.5e-125	92.80	uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349...	[more]
A0A6J1FS19	2.5e-125	92.80	uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A6J1DHN7	1.2e-122	90.80	uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of IVF0026293.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449601.1	5.16e-174	100.00	PREDICTED: uncharacterized protein LOC103491438 [Cucumis melo]	[more]
XP_004140172.1	1.94e-165	95.20	uncharacterized protein LOC101221211 [Cucumis sativus] >KGN48055.1 hypothetical ...	[more]
XP_038900700.1	4.53e-163	94.38	uncharacterized protein LOC120087841 [Benincasa hispida]	[more]
XP_022943561.1	1.46e-161	92.80	uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 unchar...	[more]
KAG7010325.1	4.19e-161	92.40	hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0026293.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	5.8e-98	70.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	2.0e-77	60.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	1.8e-67	54.81	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	2.6e-13	66.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 12..250
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 12..250

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0026293	IVF0026293	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026293.1-five_prime_utr	IVF0026293.1-five_prime_utr-chr05:1650368..1650410	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026293.1-exon	IVF0026293.1-exon-chr05:1650368..1650737	exon
IVF0026293.1-exon	IVF0026293.1-exon-chr05:1652084..1652191	exon
IVF0026293.1-exon	IVF0026293.1-exon-chr05:1652332..1652899	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026293.1-cds	IVF0026293.1-cds-chr05:1650411..1650737	CDS
IVF0026293.1-cds	IVF0026293.1-cds-chr05:1652084..1652191	CDS
IVF0026293.1-cds	IVF0026293.1-cds-chr05:1652332..1652649	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0026293.1-three_prime_utr	IVF0026293.1-three_prime_utr-chr05:1652650..1652899	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0026293.1	IVF0026293.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding