IVF0025956.5 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0025956.5
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr05: 17375429 .. 17380797 (-)
Sequence length	4674
RNA-Seq Expression	IVF0025956.5
Synteny	IVF0025956.5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAAATAATTCCCTCTTCTTTCCTAAATTTCCTTTCATTTGTCTTTCATTTCCACGATTTTTTCCCTTTCCTCTTCCTTTCCCCACAAAATTTTCAAATACGACTCTCAACTACATACCCAAGCTCCCATCGCTGCACAGCCGAGGCAGAGCCGAGTGCTGGAGCAGAGAGAATGGAAGATGAGATTGCAACAGTTGGTAAATAGATTGAGGGATAGCTTTTGCTGGCAACATGCCCTAGAACTGATATTCCCGGAAGAAAAAGGTACGAAGCTAAATGCACTTGTCCATGGATGAGAATGAGAATCTGGAAGAGCCGGAGTAGTTTTCTTTGTAGATATTTCAGGTGATTTGATGGAAGAAATGTTTGTGATAAAGTGAGAGTGAATGTGATGGTTTTTCCTTTTTTTGAGTTGGTTTGATTTTAGCACTGTTAGCGAAATTCACCCCGTTTTTCTACTTTATCTAGTTTTTTCATATGTTTCTTACTTTTTGTTCTATGTAATTTAATTTGATTCCAGAGACGGGAGCTTATCGTATTTTGCTGGGGCTGAGAATAAAGATGAAAGGGTTCTTGTGCCCGATTCGTGGTCCTTAACCAACATTCACGACATGTTAAAAACAAAAACTTGATATTTGTTTAAAGTTTTTGTGATTTTCTATTTTTTTTTTGTTTAGTTTATCGAAATTGAATAATTAAAATTGGATTTCAGGGCTTGTGAATTATTCTATTATTTAAAAGGTGGAAAAGTCGATTACGATGAAGAGCACAACAGAGTTTTTGGTCACTCGCAATTTGATCGCATGTATGAACAAGGTCAATTGGGTTTCGTGTTTCTTTTTTTTTTTTTTTTTTGTGTTTTTTGTTTTTGGTAAATTTCAAAAACCACTTTGTTAAGTAGATGTTGTAGTTCTACATTCAATGATAAAAATTGAGTCAAAATATTCAAATTCTCTCACATTTATACAATTATATAATAAATTAACTTTTAACTCATACTTTGAAAAAAAATTACAATATAGCAAAACTTAACTTTTAGTATTTTCTTGGTGCCACTCTTTGAGGAATTAAACTTGATTGTTTGATACATTAGGAGAGAGAGTATCATCCATCTGATTAAAACTTAACTATATTTTCTCACACGAATCTTGAACTCATACATTTAGTGGTACAAATATAATAATAAGATAACTTTCTTTCTATTAGGTCTTGAGAGTGATGTGATATGTTATTGTATTTAGCTTAGGCATTGTTCTTACGTCTCTCTCTGTAATCTTATAGCTTGGGATTCGTCCTCTCTTGTATACTTGGTTGACGGGAGAAAAGAAAAAAGAATAAACAAAGAAGAATTTAAACTTACGCTTATCTGATTGCTTTTAAGTTTGTGTGTGACTGCATTGCATGTTTTTTACTTAAAACTGTGATGGTTGTAGGAATCAGGAGAGGAAGATCTTATTTTATCCTAGACAGCATCATGTGAGTTTTATTTTTTTTCTCTTCAAGTGTACAAGGAATTAAATGATCTATTCTTTAAGCTTAATTTTCAATTGTCTTTGTCAGATCTTGGTGAAAAATGATGGATGCCAAGATTCTATTCCTACATTTTTTGGTAGGTTGGGTTTGTACATTGAAGGATCGGTTTTTCCACCTCTTTCTGGCATTCATATCAGAATCATTGCTACTAGAGACAGTTCCATTGCTTCCCTGAAGAACGGGGAGTTGGTACTTGAAACTGCCACTGAAAAAATCTTTTTAATACAATTTCTTCCCTTAAGATTTTTCCTAGCCATTGAAAAAAAATGAATGTCGAGATCTCCTAGAAACTGTCCGAAGAAAGATTAACTTGATATCAGAAAACTTCTTGTAACTTTGGTTACCTACAACTGACTGACATTTCCTTTTTGTCGAGGTTACCTTTTTGTGTAACATTATATACATTTGTGGAGTTGTAAGAATTTTAATATAGGGGACTGGAGTATTGGTATTGAGTTGCTGGAAAGAGGCCTGAGATTTTGGCAATTTTTCATAATTGTGCTGTAAGTTCTGTGGACCTTCAACATTCATTGTTTCTTTTCATGTTGCCATATTAATTCTTGTTTTCGTTCATGGTGTAGGTCATAAGTATAGCCTGTTGTGTGTTTTACCATAACTGTGGCAATCATGGTGTTTTGAAAGACAGAACACTTCTATTTCTCAAGGTACAATGACCCAGAAAATCATATCATTCAACTTGTTTGAGCATCGGTTGTTCAAGAAATTTTGCTACCACACTTCAAATAGTTTTTCATCCAATACCCTTCATGCCAAAATGGTCAAGATTGGTTCTATTATTGAGTCAGGGAAGTTTGTTTTGACATCTTATGTGAAATCTAAGAAATTAAACGATGCTCAGAAACTGTTCGACGAAATGCCCAATAGAGATGTACTTACATGGACGGCCATTATATCGGGTTTTTCTAGAGTAAATTGTTCTGGAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGAAGGTGTTTGTCCAAATCACTTTACTTTGTCTACTGTTCTTAAACTTTGCTCTAAAGTAGGTGATGTGCGAATGGGTAAGGGAATTCATGGATGGATACTGAGAAACGGGGTTAAATTAGATGTTGTCTTGGAAAATTCTCTGCTTGATTTGTATGCTAAGTTTGATGAATTTGTTTATGCCAGAAAGTTGTATGATTCAATGGGAGAAAAGAGTACTGATACTGACAACATAATTCTTGGTGTATACGTCCGTAGTTGTGATGTTAACAAATCTCTTCATTTATTCAGAAACTTGCCCTGCAGAAATGCTGCGAGTTGGAATACAATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATGCAGCGTTGGAGCTGCTCTATGAAATGGTGGAGAACGAATCTGAGTTTAACAATTTTACTTCTTCCATAGCTTTAAGTGTGGCTTCTTCTTTACTGATTCTTGAGCTAGGTAGACAGGTACATGGCCGGATTGTCAGGTGTGGTCTTCATAATGATGGATTTGTAAAGAGTGCACTGATAAATATGTACATTAAGTGTGGAAATTTGGAAAAAGCATCGGTGATATATAGTCAACTGCCTTCAGGTTTTGCGACGAAACAAGGTTCCAATATTGTATGCAGTGACACGATGACAGAAATTGTTTCGCGGAGCTCAATGGTGTATGGATATGTCCGAAATGGCAAATATGAAGATGCTTTCAAAACTTTTGTGTCTATGGTCCGTGAACGGGTTCTAATGGACAAATTTACCATTGCAAGCGTTGTGTCTGCTTGTGCTAATGCTGGTGTTTTGGAGCTTGGACGTCAAGTCCATGGATTCATTCAGAAATCTGTGGAACAACTTGATGCTCACTTGGCTTCCTCCTTGATTGACATGTACGCTAAAGGTGGGAGTTTGGATTGTGCCCATCGAATTTTTGACCAAATGACCTATTACTTAAATGTTGTAATATGGACTTCCATGATCGTTGGATGTTCTTTACACGGGCATGGTAAGGAAGCCATTAGATTGTTTGAACAGATGAGATATGAGGGAATTATACCAAATGAGGTCACTTTTATAGGAGTTTTAACAGCTTGCAGTCATGCGGGGCTGCTTGAAGATGGCCTTCTATATTTTAATATGATGAAAGATGTTTATGCAATCAAGCCTAAGGTTGAGCATTACACTTGTATGGTAGATCTTTACGGCCGAGCTGGACTCTTGAATGAAGTTAAAGAATTCATCTATGAGAATGATTTATCACACCTTAGTGTAGTTTGGAAGGCATTCCTATCATCCTGTCTGCTTTACAGGGACCTTGAAATGGGAAAGTGGGTTTCTGAAAAATTGTTTAGACTCGAACCACAAGATGAAGGGTCTTATGTTTTACTATCAAACATGTGCTCCGGCAGTCAAAAGTGGCAAGAAGCCTCAAGAGCAAGAAGTTCTATGCAACACAGTGGGATTAACAAAACACCTGGTCAATCTTGGATTCATTTGAAAAATCAAGTCCACTCTTTCGTTGCAGGAGACCGATCACACCCTCAACATGCTCAAATATATGAATATCTGGACAAGCTAATTGGAAGATTGAAGGAAATCGGGTACTTGCATGATGTGAAATTGGTGATGCAGGATGTAGAAGAAGAACAGGGTGAAGTGCTTCTTGGTTGGCATAGTGAAAAGCTTGCAGTTGCTTATGGCATAATCAGCTTGGGTTCTGCCATTCCAATCCGAATCATGAAGAACCTTCGGATATGTACCGATTGTCATAACTTTATGAAGTTAACATCTCAACTTTTAGGCAGAGAGATCATTGTTCGAGACATTTGTCGTTTCCATCATTTCAATTCCGGTCATTGCTCTTGTGGTGATTATTGGTGAGCTGGGAACGAGAATCCAATGCACGTCAATTTTCATGGATAATATCACGTTAATCTGCCTGGAGTTCACAACGCAGCTGAGGGAAGCAAGACAAAATAAATTCATTAGAAAAAGCCAAAATCACAATATTCTGCTTCTTAGATGTATCAACGCCTGTGCAATTTCGAGACCTGAATTGCATATAACAGTGAACTTCACAAGTTACATCCCTGAACTGAAGGGTTGAAGTAAAGTCTGACGTAGTTCAACCCATATATATATAATCAGGATACCATGAACGTGATTGGAAATTTATGTAAATGAATGAGCCAGCGATTACCCGGTGAACTAAATGACAACCTTTACCACTTGATTCCCATCAGGAAAGAATAGTGAATCGAAGATACTATGGTCTGAACCCAAATGGCTCAGTCTTACCACCACCTCAACAACAGTTTCAGAAACACTGAACGTTAATCATATTGATGTTTAACCGGAAGAGTGGAGAAGTATTGCTCACAGAAATCCGCTTACACATTGTCAGAATCATGTTATGACTTTTGATAACTTTCTCTATTAGTGGTTTTAAAGAAAGTGCTTAAAAATAGTTTGAAGTGCTCTAGAAATTTTCAAGACACTTTTAGTTGAAAGCACTTTCTATTTTTCAAATTCCCTCACGGGAACTTCAATACCAGTTCTTACGAGGCACATTGAAGAAATGCAAGGGAAGAAGATTCTTAAGTGTTAACATGTTGACCATTTTTCTCAACCACTTGTGTACTCACGACAGGGCGAATGAGTGTTTGTATGTGATTAGAAATGATTAGAAATAGTGGACTTGGGCCTTGATGAAAGCCAATGGGTAGTTAAGATTTACTTTGTCCTAATTTTTTATTCTTTTAATTAGACTCATGTTATCTATAAATTTCTCCCTTTTGTACCTTTATGATTATCACAAAATAATAAGAAGCAAAATATTGCCTTTTTTT

mRNA sequence

CTAAAAATAATTCCCTCTTCTTTCCTAAATTTCCTTTCATTTGTCTTTCATTTCCACGATTTTTTCCCTTTCCTCTTCCTTTCCCCACAAAATTTTCAAATACGACTCTCAACTACATACCCAAGCTCCCATCGCTGCACAGCCGAGGCAGAGCCGAGTGCTGGAGCAGAGAGAATGGAAGATGAGATTGCAACAGTTGGTAAATAGATTGAGGGATAGCTTTTGCTGGCAACATGCCCTAGAACTGATATTCCCGGAAGAAAAAGGTACGAAGCTAAATGCACTTGTCCATGGATGAGAATGAGAATCTGGAAGAGCCGGAGTAGTTTTCTTTGTAGATATTTCAGGTGATTTGATGGAAGAAATGTTTGTGATAAAGTGAGAGTGAATGTGATGGTTTTTCCTTTTTTTGAGTTGGTTTGATTTTAGCACTGTTAGCGAAATTCACCCCGTTTTTCTACTTTATCTAGTTTTTTCATATGTTTCTTACTTTTTGTTCTATGTAATTTAATTTGATTCCAGAGACGGGAGCTTATCGTATTTTGCTGGGGCTGAGAATAAAGATGAAAGGGTTCTTGTGCCCGATTCGTGGTCCTTAACCAACATTCACGACATGTTAAAAACAAAAACTTGATATTTGTTTAAAGTTTTTGTGATTTTCTATTTTTTTTTTGTTTAGTTTATCGAAATTGAATAATTAAAATTGGATTTCAGGGCTTGTGAATTATTCTATTATTTAAAAGGTGGAAAAGTCGATTACGATGAAGAGCACAACAGAGTTTTTGGTCACTCGCAATTTGATCGCATGTATGAACAAGGAATCAGGAGAGGAAGATCTTATTTTATCCTAGACAGCATCATGTGAGTTTTATTTTTTTTCTCTTCAAGTGTACAAGGAATTAAATGATCTATTCTTTAAGCTTAATTTTCAATTGTCTTTGTCAGATCTTGGTGAAAAATGATGGATGCCAAGATTCTATTCCTACATTTTTTGGTAGGTTGGGTTTGTACATTGAAGGATCGGTTTTTCCACCTCTTTCTGGCATTCATATCAGAATCATTGCTACTAGAGACAGTTCCATTGCTTCCCTGAAGAACGGGGAGTTGGTACTTGAAACTGCCACTGAAAAAATCTTTTTAATACAATTTCTTCCCTTAAGATTTTTCCTAGCCATTGAAAAAAAATGAATGTCGAGATCTCCTAGAAACTGTCCGAAGAAAGATTAACTTGATATCAGAAAACTTCTTGTAACTTTGGTTACCTACAACTGACTGACATTTCCTTTTTGTCGAGGTTACCTTTTTGTGTAACATTATATACATTTGTGGAGTTGTAAGAATTTTAATATAGGGGACTGGAGTATTGGTATTGAGTTGCTGGAAAGAGGCCTGAGATTTTGGCAATTTTTCATAATTGTGCTGTCATAAGTATAGCCTGTTGTGTGTTTTACCATAACTGTGGCAATCATGGTGTTTTGAAAGACAGAACACTTCTATTTCTCAAGGTACAATGACCCAGAAAATCATATCATTCAACTTGTTTGAGCATCGGTTGTTCAAGAAATTTTGCTACCACACTTCAAATAGTTTTTCATCCAATACCCTTCATGCCAAAATGGTCAAGATTGGTTCTATTATTGAGTCAGGGAAGTTTGTTTTGACATCTTATGTGAAATCTAAGAAATTAAACGATGCTCAGAAACTGTTCGACGAAATGCCCAATAGAGATGTACTTACATGGACGGCCATTATATCGGGTTTTTCTAGAGTAAATTGTTCTGGAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGAAGGTGTTTGTCCAAATCACTTTACTTTGTCTACTGTTCTTAAACTTTGCTCTAAAGTAGGTGATGTGCGAATGGGTAAGGGAATTCATGGATGGATACTGAGAAACGGGGTTAAATTAGATGTTGTCTTGGAAAATTCTCTGCTTGATTTGTATGCTAAGTTTGATGAATTTGTTTATGCCAGAAAGTTGTATGATTCAATGGGAGAAAAGAGTACTGATACTGACAACATAATTCTTGGTGTATACGTCCGTAGTTGTGATGTTAACAAATCTCTTCATTTATTCAGAAACTTGCCCTGCAGAAATGCTGCGAGTTGGAATACAATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATGCAGCGTTGGAGCTGCTCTATGAAATGGTGGAGAACGAATCTGAGTTTAACAATTTTACTTCTTCCATAGCTTTAAGTGTGGCTTCTTCTTTACTGATTCTTGAGCTAGGTAGACAGGTACATGGCCGGATTGTCAGGTGTGGTCTTCATAATGATGGATTTGTAAAGAGTGCACTGATAAATATGTACATTAAGTGTGGAAATTTGGAAAAAGCATCGGTGATATATAGTCAACTGCCTTCAGGTTTTGCGACGAAACAAGGTTCCAATATTGTATGCAGTGACACGATGACAGAAATTGTTTCGCGGAGCTCAATGGTGTATGGATATGTCCGAAATGGCAAATATGAAGATGCTTTCAAAACTTTTGTGTCTATGGTCCGTGAACGGGTTCTAATGGACAAATTTACCATTGCAAGCGTTGTGTCTGCTTGTGCTAATGCTGGTGTTTTGGAGCTTGGACGTCAAGTCCATGGATTCATTCAGAAATCTGTGGAACAACTTGATGCTCACTTGGCTTCCTCCTTGATTGACATGTACGCTAAAGGTGGGAGTTTGGATTGTGCCCATCGAATTTTTGACCAAATGACCTATTACTTAAATGTTGTAATATGGACTTCCATGATCGTTGGATGTTCTTTACACGGGCATGGTAAGGAAGCCATTAGATTGTTTGAACAGATGAGATATGAGGGAATTATACCAAATGAGGTCACTTTTATAGGAGTTTTAACAGCTTGCAGTCATGCGGGGCTGCTTGAAGATGGCCTTCTATATTTTAATATGATGAAAGATGTTTATGCAATCAAGCCTAAGGTTGAGCATTACACTTGTATGGTAGATCTTTACGGCCGAGCTGGACTCTTGAATGAAGTTAAAGAATTCATCTATGAGAATGATTTATCACACCTTAGTGTAGTTTGGAAGGCATTCCTATCATCCTGTCTGCTTTACAGGGACCTTGAAATGGGAAAGTGGGTTTCTGAAAAATTGTTTAGACTCGAACCACAAGATGAAGGGTCTTATGTTTTACTATCAAACATGTGCTCCGGCAGTCAAAAGTGGCAAGAAGCCTCAAGAGCAAGAAGTTCTATGCAACACAGTGGGATTAACAAAACACCTGGTCAATCTTGGATTCATTTGAAAAATCAAGTCCACTCTTTCGTTGCAGGAGACCGATCACACCCTCAACATGCTCAAATATATGAATATCTGGACAAGCTAATTGGAAGATTGAAGGAAATCGGGTACTTGCATGATGTGAAATTGGTGATGCAGGATGTAGAAGAAGAACAGGGTGAAGTGCTTCTTGGTTGGCATAGTGAAAAGCTTGCAGTTGCTTATGGCATAATCAGCTTGGGTTCTGCCATTCCAATCCGAATCATGAAGAACCTTCGGATATGTACCGATTGTCATAACTTTATGAAGTTAACATCTCAACTTTTAGGCAGAGAGATCATTGTTCGAGACATTTGTCGTTTCCATCATTTCAATTCCGGTCATTGCTCTTGTGGTGATTATTGGTGAGCTGGGAACGAGAATCCAATGCACGTCAATTTTCATGGATAATATCACGTTAATCTGCCTGGAGTTCACAACGCAGCTGAGGGAAGCAAGACAAAATAAATTCATTAGAAAAAGCCAAAATCACAATATTCTGCTTCTTAGATGTATCAACGCCTGTGCAATTTCGAGACCTGAATTGCATATAACAGTGAACTTCACAAGTTACATCCCTGAACTGAAGGGTTGAAGTAAAGTCTGACGTAGTTCAACCCATATATATATAATCAGGATACCATGAACGTGATTGGAAATTTATGTAAATGAATGAGCCAGCGATTACCCGGTGAACTAAATGACAACCTTTACCACTTGATTCCCATCAGGAAAGAATAGTGAATCGAAGATACTATGGTCTGAACCCAAATGGCTCAGTCTTACCACCACCTCAACAACAGTTTCAGAAACACTGAACGTTAATCATATTGATGTTTAACCGGAAGAGTGGAGAAGTATTGCTCACAGAAATCCGCTTACACATTGTCAGAATCATGTTATGACTTTTGATAACTTTCTCTATTAGTGGTTTTAAAGAAAGTGCTTAAAAATAGTTTGAAGTGCTCTAGAAATTTTCAAGACACTTTTAGTTGAAAGCACTTTCTATTTTTCAAATTCCCTCACGGGAACTTCAATACCAGTTCTTACGAGGCACATTGAAGAAATGCAAGGGAAGAAGATTCTTAAGTGTTAACATGTTGACCATTTTTCTCAACCACTTGTGTACTCACGACAGGGCGAATGAGTGTTTGTATGTGATTAGAAATGATTAGAAATAGTGGACTTGGGCCTTGATGAAAGCCAATGGGTAGTTAAGATTTACTTTGTCCTAATTTTTTATTCTTTTAATTAGACTCATGTTATCTATAAATTTCTCCCTTTTGTACCTTTATGATTATCACAAAATAATAAGAAGCAAAATATTGCCTTTTTTT

Coding sequence (CDS)

ATGACCCAGAAAATCATATCATTCAACTTGTTTGAGCATCGGTTGTTCAAGAAATTTTGCTACCACACTTCAAATAGTTTTTCATCCAATACCCTTCATGCCAAAATGGTCAAGATTGGTTCTATTATTGAGTCAGGGAAGTTTGTTTTGACATCTTATGTGAAATCTAAGAAATTAAACGATGCTCAGAAACTGTTCGACGAAATGCCCAATAGAGATGTACTTACATGGACGGCCATTATATCGGGTTTTTCTAGAGTAAATTGTTCTGGAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGAAGGTGTTTGTCCAAATCACTTTACTTTGTCTACTGTTCTTAAACTTTGCTCTAAAGTAGGTGATGTGCGAATGGGTAAGGGAATTCATGGATGGATACTGAGAAACGGGGTTAAATTAGATGTTGTCTTGGAAAATTCTCTGCTTGATTTGTATGCTAAGTTTGATGAATTTGTTTATGCCAGAAAGTTGTATGATTCAATGGGAGAAAAGAGTACTGATACTGACAACATAATTCTTGGTGTATACGTCCGTAGTTGTGATGTTAACAAATCTCTTCATTTATTCAGAAACTTGCCCTGCAGAAATGCTGCGAGTTGGAATACAATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATGCAGCGTTGGAGCTGCTCTATGAAATGGTGGAGAACGAATCTGAGTTTAACAATTTTACTTCTTCCATAGCTTTAAGTGTGGCTTCTTCTTTACTGATTCTTGAGCTAGGTAGACAGGTACATGGCCGGATTGTCAGGTGTGGTCTTCATAATGATGGATTTGTAAAGAGTGCACTGATAAATATGTACATTAAGTGTGGAAATTTGGAAAAAGCATCGGTGATATATAGTCAACTGCCTTCAGGTTTTGCGACGAAACAAGGTTCCAATATTGTATGCAGTGACACGATGACAGAAATTGTTTCGCGGAGCTCAATGGTGTATGGATATGTCCGAAATGGCAAATATGAAGATGCTTTCAAAACTTTTGTGTCTATGGTCCGTGAACGGGTTCTAATGGACAAATTTACCATTGCAAGCGTTGTGTCTGCTTGTGCTAATGCTGGTGTTTTGGAGCTTGGACGTCAAGTCCATGGATTCATTCAGAAATCTGTGGAACAACTTGATGCTCACTTGGCTTCCTCCTTGATTGACATGTACGCTAAAGGTGGGAGTTTGGATTGTGCCCATCGAATTTTTGACCAAATGACCTATTACTTAAATGTTGTAATATGGACTTCCATGATCGTTGGATGTTCTTTACACGGGCATGGTAAGGAAGCCATTAGATTGTTTGAACAGATGAGATATGAGGGAATTATACCAAATGAGGTCACTTTTATAGGAGTTTTAACAGCTTGCAGTCATGCGGGGCTGCTTGAAGATGGCCTTCTATATTTTAATATGATGAAAGATGTTTATGCAATCAAGCCTAAGGTTGAGCATTACACTTGTATGGTAGATCTTTACGGCCGAGCTGGACTCTTGAATGAAGTTAAAGAATTCATCTATGAGAATGATTTATCACACCTTAGTGTAGTTTGGAAGGCATTCCTATCATCCTGTCTGCTTTACAGGGACCTTGAAATGGGAAAGTGGGTTTCTGAAAAATTGTTTAGACTCGAACCACAAGATGAAGGGTCTTATGTTTTACTATCAAACATGTGCTCCGGCAGTCAAAAGTGGCAAGAAGCCTCAAGAGCAAGAAGTTCTATGCAACACAGTGGGATTAACAAAACACCTGGTCAATCTTGGATTCATTTGAAAAATCAAGTCCACTCTTTCGTTGCAGGAGACCGATCACACCCTCAACATGCTCAAATATATGAATATCTGGACAAGCTAATTGGAAGATTGAAGGAAATCGGGTACTTGCATGATGTGAAATTGGTGATGCAGGATGTAGAAGAAGAACAGGGTGAAGTGCTTCTTGGTTGGCATAGTGAAAAGCTTGCAGTTGCTTATGGCATAATCAGCTTGGGTTCTGCCATTCCAATCCGAATCATGAAGAACCTTCGGATATGTACCGATTGTCATAACTTTATGAAGTTAACATCTCAACTTTTAGGCAGAGAGATCATTGTTCGAGACATTTGTCGTTTCCATCATTTCAATTCCGGTCATTGCTCTTGTGGTGATTATTGGTGA

Protein sequence

MTQKIISFNLFEHRLFKKFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW

Homology

[Close]

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.0e-147
Identity = 265/706 (37.54%), Postives = 431/706 (61.05%), Query Frame = 0


Query: 32  LHAKMVKIGSIIE-SGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCS 91
           LHA+ ++  S+   S   V++ Y   K L++A  LF  + +  VL W ++I  F+  +  
Sbjct: 27  LHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLF 86

Query: 92  GMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSL 151
             AL  F EM   G CP+H    +VLK C+ + D+R G+ +HG+I+R G+  D+   N+L
Sbjct: 87  SKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNAL 146

Query: 152 LDLYAK---FDEFVYARKLYDSMGEKSTDT--DNIILGVYVRSCDVNKSLHLFRNLPCRN 211
           +++YAK       +    ++D M ++++++  +++     +    ++    +F  +P ++
Sbjct: 147 MNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKD 206

Query: 212 AASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHG 271
             S+NTII G  Q G    AL ++ EM   + + ++FT S  L + S  + +  G+++HG
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266

Query: 272 RIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVS 331
            ++R G+ +D ++ S+L++MY K   +E +  ++S+L             C D     +S
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL------------YCRDG----IS 326

Query: 332 RSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQ 391
            +S+V GYV+NG+Y +A + F  MV  +V       +SV+ ACA+   L LG+Q+HG++ 
Sbjct: 327 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 386

Query: 392 KSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAI 451
           +     +  +AS+L+DMY+K G++  A +IFD+M   L+ V WT++I+G +LHGHG EA+
Sbjct: 387 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN-VLDEVSWTAIIMGHALHGHGHEAV 446

Query: 452 RLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDL 511
            LFE+M+ +G+ PN+V F+ VLTACSH GL+++   YFN M  VY +  ++EHY  + DL
Sbjct: 447 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 506

Query: 512 YGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSY 571
            GRAG L E   FI +  +     VW   LSSC ++++LE+ + V+EK+F ++ ++ G+Y
Sbjct: 507 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 566

Query: 572 VLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIY 631
           VL+ NM + + +W+E ++ R  M+  G+ K P  SWI +KN+ H FV+GDRSHP   +I 
Sbjct: 567 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 626

Query: 632 EYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIM 691
           E+L  ++ ++++ GY+ D   V+ DV+EE    LL  HSE+LAVA+GII+      IR+ 
Sbjct: 627 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 686

Query: 692 KNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           KN+RICTDCH  +K  S++  REIIVRD  RFHHFN G+CSCGDYW
Sbjct: 687 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 3.7e-145
Identity = 263/701 (37.52%), Postives = 423/701 (60.34%), Query Frame = 0


Query: 49  VLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPN 108
           VL++Y K   ++   + FD++P RD ++WT +I G+  +     A+++  +M+ EG+ P 
Sbjct: 86  VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145

Query: 109 HFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYD 168
            FTL+ VL   +    +  GK +H +I++ G++ +V + NSLL++YAK  + + A+ ++D
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205

Query: 169 SMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALEL 228
            M  +   + N ++ ++++   ++ ++  F  +  R+  +WN++I G  Q GY   AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265

Query: 229 LYEMVENE-SEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYI 288
             +M+ +     + FT +  LS  ++L  L +G+Q+H  IV  G    G V +ALI+MY 
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325

Query: 289 KCGNLEKASVIYSQLPS------GFAT-----------KQGSNIVCSDTMTEIVSRSSMV 348
           +CG +E A  +  Q  +      GF              Q  NI  S    ++V+ ++M+
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385

Query: 349 YGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQ 408
            GY ++G Y +A   F SMV      + +T+A+++S  ++   L  G+Q+HG   KS E 
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445

Query: 409 LDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQ 468
               ++++LI MYAK G++  A R FD +    + V WTSMI+  + HGH +EA+ LFE 
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505

Query: 469 MRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAG 528
           M  EG+ P+ +T++GV +AC+HAGL+  G  YF+MMKDV  I P + HY CMVDL+GRAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565

Query: 529 LLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSN 588
           LL E +EFI +  +    V W + LS+C +++++++GK  +E+L  LEP++ G+Y  L+N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625

Query: 589 MCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDK 648
           + S   KW+EA++ R SM+   + K  G SWI +K++VH F   D +HP+  +IY  + K
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685

Query: 649 LIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRI 708
           +   +K++GY+ D   V+ D+EEE  E +L  HSEKLA+A+G+IS      +RIMKNLR+
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745

Query: 709 CTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           C DCH  +K  S+L+GREIIVRD  RFHHF  G CSC DYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

[Close]

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 469.2 bits (1206), Expect = 8.8e-131
Identity = 245/716 (34.22%), Postives = 399/716 (55.73%), Query Frame = 0


Query: 20   CYHTSNSFSSNTLHAKMVKIG----SIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVL 79
            C      F    LHA   K+G    + IE    +L  Y K   +  A   F E    +V+
Sbjct: 399  CSADGTLFRGQQLHAYTTKLGFASNNKIEGA--LLNLYAKCADIETALDYFLETEVENVV 458

Query: 80   TWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWI 139
             W  ++  +  ++    + ++FR+M +E + PN +T  ++LK C ++GD+ +G+ IH  I
Sbjct: 459  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 518

Query: 140  LRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSL 199
            ++   +L+  + + L+D+YAK             +G+  T  D +I              
Sbjct: 519  IKTNFQLNAYVCSVLIDMYAK-------------LGKLDTAWDILI-------------- 578

Query: 200  HLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLL 259
                    ++  SW T+I G  Q  + + AL    +M++     +    + A+S  + L 
Sbjct: 579  ----RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 638

Query: 260  ILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIV 319
             L+ G+Q+H +    G  +D   ++AL+ +Y +CG +E++ + + Q      T+ G NI 
Sbjct: 639  ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ------TEAGDNI- 698

Query: 320  CSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLE 379
                     + +++V G+ ++G  E+A + FV M RE +  + FT  S V A +    ++
Sbjct: 699  ---------AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 758

Query: 380  LGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGC 439
             G+QVH  I K+    +  + ++LI MYAK GS+  A + F +++   N V W ++I   
Sbjct: 759  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAY 818

Query: 440  SLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPK 499
            S HG G EA+  F+QM +  + PN VT +GVL+ACSH GL++ G+ YF  M   Y + PK
Sbjct: 819  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 878

Query: 500  VEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLF 559
             EHY C+VD+  RAGLL+  KEFI E  +   ++VW+  LS+C++++++E+G++ +  L 
Sbjct: 879  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 938

Query: 560  RLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGD 619
             LEP+D  +YVLLSN+ + S+KW      R  M+  G+ K PGQSWI +KN +HSF  GD
Sbjct: 939  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 998

Query: 620  RSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIIS 679
            ++HP   +I+EY   L  R  EIGY+ D   ++ +++ EQ + ++  HSEKLA+++G++S
Sbjct: 999  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1058

Query: 680  LGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
            L + +PI +MKNLR+C DCH ++K  S++  REIIVRD  RFHHF  G CSC DYW
Sbjct: 1059 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.1e-130
Identity = 257/718 (35.79%), Postives = 402/718 (55.99%), Query Frame = 0


Query: 18  KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTS----YVKSKKLNDAQKLFDEMPNRD 77
           K C   +       +H  +VK G  ++   F +T     Y K +++N+A+K+FD MP RD
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLD--LFAMTGLENMYAKCRQVNEARKVFDRMPERD 202

Query: 78  VLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHG 137
           +++W  I++G+S+   + MAL++ + M  E + P+  T+ +VL   S +  + +GK IHG
Sbjct: 203 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 262

Query: 138 WILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNK 197
           + +R+G    V +  +L+D+YAK      AR+L+D M E                     
Sbjct: 263 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE--------------------- 322

Query: 198 SLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASS 257
                     RN  SWN++I   +Q      A+ +  +M++   +  + +   AL   + 
Sbjct: 323 ----------RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 382

Query: 258 LLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSN 317
           L  LE GR +H   V  GL  +  V ++LI+MY KC  ++ A+ ++ +L S         
Sbjct: 383 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS--------- 442

Query: 318 IVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGV 377
                    +VS ++M+ G+ +NG+  DA   F  M    V  D FT  SV++A A   +
Sbjct: 443 -------RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 502

Query: 378 LELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIV 437
               + +HG + +S    +  + ++L+DMYAK G++  A  IFD M+   +V  W +MI 
Sbjct: 503 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 562

Query: 438 GCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIK 497
           G   HG GK A+ LFE+M+   I PN VTF+ V++ACSH+GL+E GL  F MMK+ Y+I+
Sbjct: 563 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 622

Query: 498 PKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEK 557
             ++HY  MVDL GRAG LNE  +FI +  +     V+ A L +C +++++   +  +E+
Sbjct: 623 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 682

Query: 558 LFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVA 617
           LF L P D G +VLL+N+   +  W++  + R SM   G+ KTPG S + +KN+VHSF +
Sbjct: 683 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFS 742

Query: 618 GDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGI 677
           G  +HP   +IY +L+KLI  +KE GY+ D  LV+  VE +  E LL  HSEKLA+++G+
Sbjct: 743 GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGL 802

Query: 678 ISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           ++  +   I + KNLR+C DCHN  K  S + GREI+VRD+ RFHHF +G CSCGDYW
Sbjct: 803 LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.7e-126
Identity = 239/713 (33.52%), Postives = 404/713 (56.66%), Query Frame = 0


Query: 28  SSNTLHAKMVKIGSIIESGKFVLTSYVK-------SKKLNDAQKLFDEMPNRDVLTWTAI 87
           S   +HA+M+KIG  + +  + L+  ++        + L  A  +F  +   ++L W  +
Sbjct: 48  SLRIIHAQMIKIG--LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 107

Query: 88  ISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGV 147
             G +  +    AL+L+  M+  G+ PN +T   VLK C+K    + G+ IHG +L+ G 
Sbjct: 108 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 167

Query: 148 KLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRN 207
            LD+ +  SL+ +Y +      A K++D    +   +   ++  Y     +  +  LF  
Sbjct: 168 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 227

Query: 208 LPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELG 267
           +P ++  SWN +I G  + G    ALEL  +M++     +  T    +S  +    +ELG
Sbjct: 228 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 287

Query: 268 RQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTM 327
           RQVH  I   G  ++  + +ALI++Y KCG LE A  ++ +LP                 
Sbjct: 288 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----------------Y 347

Query: 328 TEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQV 387
            +++S ++++ GY     Y++A   F  M+R     +  T+ S++ ACA+ G +++GR +
Sbjct: 348 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 407

Query: 388 HGFIQKSVEQLD--AHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLH 447
           H +I K ++ +   + L +SLIDMYAK G ++ AH++F+ +  + ++  W +MI G ++H
Sbjct: 408 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 467

Query: 448 GHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEH 507
           G    +  LF +MR  GI P+++TF+G+L+ACSH+G+L+ G   F  M   Y + PK+EH
Sbjct: 468 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 527

Query: 508 YTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLE 567
           Y CM+DL G +GL  E +E I   ++    V+W + L +C ++ ++E+G+  +E L ++E
Sbjct: 528 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 587

Query: 568 PQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSH 627
           P++ GSYVLLSN+ + + +W E ++ R+ +   G+ K PG S I + + VH F+ GD+ H
Sbjct: 588 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 647

Query: 628 PQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGS 687
           P++ +IY  L+++   L++ G++ D   V+Q++EEE  E  L  HSEKLA+A+G+IS   
Sbjct: 648 PRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKP 707

Query: 688 AIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
              + I+KNLR+C +CH   KL S++  REII RD  RFHHF  G CSC DYW
Sbjct: 708 GTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL
Match: A0A1S3B4E3 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucumis melo OX=3656 GN=LOC103485889 PE=3 SV=1)

HSP 1 Score: 1453.0 bits (3760), Expect = 0.0e+00
Identity = 714/714 (100.00%), Postives = 714/714 (100.00%), Query Frame = 0


Query: 18   KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW 77
            KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW
Sbjct: 299  KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW 358

Query: 78   TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR 137
            TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR
Sbjct: 359  TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR 418

Query: 138  NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL 197
            NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL
Sbjct: 419  NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL 478

Query: 198  FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL 257
            FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL
Sbjct: 479  FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL 538

Query: 258  ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS 317
            ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS
Sbjct: 539  ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS 598

Query: 318  DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG 377
            DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG
Sbjct: 599  DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG 658

Query: 378  RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL 437
            RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL
Sbjct: 659  RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL 718

Query: 438  HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE 497
            HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE
Sbjct: 719  HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE 778

Query: 498  HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL 557
            HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL
Sbjct: 779  HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL 838

Query: 558  EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS 617
            EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS
Sbjct: 839  EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS 898

Query: 618  HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG 677
            HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG
Sbjct: 899  HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG 958

Query: 678  SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
            SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW
Sbjct: 959  SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 1012

[Close]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL
Match: A0A0A0LKI4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074230 PE=3 SV=1)

HSP 1 Score: 1420.6 bits (3676), Expect = 0.0e+00
Identity = 700/731 (95.76%), Postives = 711/731 (97.26%), Query Frame = 0


Query: 1   MTQKIISFNLFEHRLFKKFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLN 60
           MT KIISFNL EH LFK F YHTSN FSSNTLHAKMVKIGSI  SGKFVLTSYVKS+KLN
Sbjct: 28  MTHKIISFNLSEHHLFKSFSYHTSNHFSSNTLHAKMVKIGSIFVSGKFVLTSYVKSEKLN 87

Query: 61  DAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCS 120
           DAQKLFDEMPNRDVLTWTA+ISGFSRVN SGMALQLFREMLVEGV PNHFTLSTVLKLCS
Sbjct: 88  DAQKLFDEMPNRDVLTWTALISGFSRVNSSGMALQLFREMLVEGVSPNHFTLSTVLKLCS 147

Query: 121 KVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNI 180
           KVGDVRMGKGIHGWILRNGVKLDVVLENS+LDLYAKFDEFVYARKLYDSM EKSTDTDNI
Sbjct: 148 KVGDVRMGKGIHGWILRNGVKLDVVLENSMLDLYAKFDEFVYARKLYDSMREKSTDTDNI 207

Query: 181 ILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFN 240
           ILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFN
Sbjct: 208 ILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFN 267

Query: 241 NFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYS 300
           NFTSSIALSV SSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYS
Sbjct: 268 NFTSSIALSVVSSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYS 327

Query: 301 QLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFT 360
           +LPSGFATKQ SNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFT
Sbjct: 328 RLPSGFATKQSSNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFT 387

Query: 361 IASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMT 420
           IA+VVSAC+NAGVLELGRQVHGFI K+VEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMT
Sbjct: 388 IANVVSACSNAGVLELGRQVHGFIHKTVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMT 447

Query: 421 YYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGL 480
            YLNVVIWTSMIVGC+LHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDG 
Sbjct: 448 NYLNVVIWTSMIVGCALHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGH 507

Query: 481 LYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLL 540
           LYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLS VWKAFLSSC L
Sbjct: 508 LYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSAVWKAFLSSCRL 567

Query: 541 YRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQS 600
           YRDLEMGKWVSEKLFRL+PQDEGSYVLLSNMCSGSQKW+EASRAR SMQHSGINKTPGQS
Sbjct: 568 YRDLEMGKWVSEKLFRLKPQDEGSYVLLSNMCSGSQKWEEASRARRSMQHSGINKTPGQS 627

Query: 601 WIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLL 660
           WIHLKNQVHSFVAGD+SHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLL
Sbjct: 628 WIHLKNQVHSFVAGDQSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLL 687

Query: 661 GWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHF 720
           GWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDI RFHHF
Sbjct: 688 GWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDIYRFHHF 747

Query: 721 NSGHCSCGDYW 732
           NSGHCSCGDYW
Sbjct: 748 NSGHCSCGDYW 758

[Close]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL
Match: A0A5D3C6T4 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00140 PE=3 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 694/695 (99.86%), Postives = 695/695 (100.00%), Query Frame = 0


Query: 37  VKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL 96
           +KIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL
Sbjct: 196 LKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL 255

Query: 97  FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK 156
           FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK
Sbjct: 256 FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK 315

Query: 157 FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL 216
           FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL
Sbjct: 316 FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL 375

Query: 217 MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG 276
           MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG
Sbjct: 376 MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG 435

Query: 277 FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN 336
           FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN
Sbjct: 436 FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN 495

Query: 337 GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA 396
           GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA
Sbjct: 496 GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA 555

Query: 397 SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI 456
           SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI
Sbjct: 556 SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI 615

Query: 457 IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK 516
           IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK
Sbjct: 616 IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK 675

Query: 517 EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ 576
           EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ
Sbjct: 676 EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ 735

Query: 577 KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK 636
           KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK
Sbjct: 736 KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK 795

Query: 637 EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN 696
           EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN
Sbjct: 796 EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN 855

Query: 697 FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW
Sbjct: 856 FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 890

[Close]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL
Match: A0A6J1EPP7 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita moschata OX=3662 GN=LOC111436248 PE=3 SV=1)

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 613/711 (86.22%), Postives = 658/711 (92.55%), Query Frame = 0


Query: 21   YHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAI 80
            +H+SN    NTLHAKMVK GSI ES KF+L+SYVKS+KLNDA+K+FDEMP+RDVLTWT +
Sbjct: 306  FHSSNDSLPNTLHAKMVKNGSIFESRKFILSSYVKSEKLNDARKVFDEMPSRDVLTWTVL 365

Query: 81   ISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGV 140
            ISGF+RVNCS MALQLFREMLVEGVCPN FTLSTVLKLCS+VGDV+MGKGIHGWILR+GV
Sbjct: 366  ISGFARVNCSEMALQLFREMLVEGVCPNPFTLSTVLKLCSRVGDVKMGKGIHGWILRSGV 425

Query: 141  KLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRN 200
             LDVVLENS+LDLYAKFDEF Y  KL+DSM EKST T NI+LGV+VRS DVNKSL LFRN
Sbjct: 426  SLDVVLENSMLDLYAKFDEFDYVTKLFDSMREKSTATYNILLGVHVRS-DVNKSLDLFRN 485

Query: 201  LPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELG 260
            LPCR+ ASWNT+ICGLMQGGYLN ALELLYEMVENE EFN  TSSIALSV SSLLI+ELG
Sbjct: 486  LPCRDTASWNTVICGLMQGGYLNEALELLYEMVENEPEFNKVTSSIALSVVSSLLIIELG 545

Query: 261  RQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTM 320
            RQVHGRIVRCGLHNDGFVKS+LINMYIKCGNLEKASVIYSQ+PSGFATKQ  NIVCSDTM
Sbjct: 546  RQVHGRIVRCGLHNDGFVKSSLINMYIKCGNLEKASVIYSQMPSGFATKQDFNIVCSDTM 605

Query: 321  TEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQV 380
            TEIVSRSSMV GYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSAC+NAGV ELGRQ+
Sbjct: 606  TEIVSRSSMVSGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACSNAGVFELGRQI 665

Query: 381  HGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGH 440
            H +IQK+ EQLDAHL SSLIDMYAKGGSLDCA +IF+Q T YLNVVIWTSMI GC+LHG 
Sbjct: 666  HAYIQKTGEQLDAHLTSSLIDMYAKGGSLDCARQIFEQTT-YLNVVIWTSMITGCALHGQ 725

Query: 441  GKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYT 500
            GKEAIRLFE+MRYEG+IPNEVTFIGVL ACSHAGLLEDG LYFNMMKDVYAIKPKVEH+T
Sbjct: 726  GKEAIRLFEKMRYEGMIPNEVTFIGVLAACSHAGLLEDGRLYFNMMKDVYAIKPKVEHFT 785

Query: 501  CMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQ 560
            CMVDLYGRAG LNEVK+FIYENDLSHL+ VWKAFLSSC LY+D+EMG WVSE+LFRLEP 
Sbjct: 786  CMVDLYGRAGHLNEVKKFIYENDLSHLNAVWKAFLSSCQLYKDIEMGNWVSERLFRLEPL 845

Query: 561  DEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQ 620
            DEG YVLLSNMCS +QKW+EA R R SMQH GI+KTPGQSWIH+KN+VHSFVAGDRSHPQ
Sbjct: 846  DEGPYVLLSNMCSSNQKWEEAFRTRRSMQHRGISKTPGQSWIHVKNRVHSFVAGDRSHPQ 905

Query: 621  HAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAI 680
            HAQIYEYLDKLIGRLKEIGYL DVKLVMQDVEEEQGEVLLGWHSEKLA+AYG+ISLGS+I
Sbjct: 906  HAQIYEYLDKLIGRLKEIGYLFDVKLVMQDVEEEQGEVLLGWHSEKLAIAYGLISLGSSI 965

Query: 681  PIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
            PIRIMKNLRICTDCHNFMKLTSQLL REIIVRDI RFHHFNSGHCSCGDYW
Sbjct: 966  PIRIMKNLRICTDCHNFMKLTSQLLCREIIVRDIHRFHHFNSGHCSCGDYW 1014

[Close]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL
Match: A0A6J1KA70 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxima OX=3661 GN=LOC111492492 PE=3 SV=1)

HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 603/711 (84.81%), Postives = 652/711 (91.70%), Query Frame = 0


Query: 21   YHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAI 80
            YH+SN    NTLHAKMVK GSI ES KF+L+SYVKS+KLNDA+K+FDEMP+RDVLTWT +
Sbjct: 306  YHSSNDSLPNTLHAKMVKNGSIFESRKFILSSYVKSEKLNDARKVFDEMPSRDVLTWTVL 365

Query: 81   ISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGV 140
            ISGF+RVNCS MALQLFREMLVEGV PN FTLSTVLKLCS+VGDV+MGKGIHGWILR+GV
Sbjct: 366  ISGFARVNCSEMALQLFREMLVEGVYPNPFTLSTVLKLCSRVGDVKMGKGIHGWILRSGV 425

Query: 141  KLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRN 200
             LDVVLENS+LDLYAKFDEF Y +KL+DSM EKST T NI+LGV+VRS DVNKSL LFRN
Sbjct: 426  SLDVVLENSMLDLYAKFDEFDYVKKLFDSMREKSTATYNILLGVHVRS-DVNKSLDLFRN 485

Query: 201  LPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELG 260
            LPCR+ ASWNT+ICGLMQGGYLN ALELLYEMVEN+ EFN  TSSIALSV SSLLI+ELG
Sbjct: 486  LPCRDTASWNTVICGLMQGGYLNEALELLYEMVENQPEFNKVTSSIALSVVSSLLIIELG 545

Query: 261  RQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTM 320
            RQVHGRI+RCG HNDGFVKS+LINMYIKCGNLEKASVIYSQ+PSGF  KQ  +IV SDTM
Sbjct: 546  RQVHGRILRCGFHNDGFVKSSLINMYIKCGNLEKASVIYSQMPSGFGKKQDFDIVYSDTM 605

Query: 321  TEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQV 380
            TEIVSRSSMV GYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSAC+NAGV ELGRQ+
Sbjct: 606  TEIVSRSSMVSGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACSNAGVFELGRQI 665

Query: 381  HGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGH 440
            H +IQK+ EQLDAHL SSLIDMYAKGGSLDCA +IF+QMT YLNVVIWTSMI GC+LHG 
Sbjct: 666  HAYIQKTGEQLDAHLTSSLIDMYAKGGSLDCARQIFEQMT-YLNVVIWTSMITGCALHGQ 725

Query: 441  GKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYT 500
            GKEAIRLFE+MRYEG+IPNEVTFIGVL ACSHAGL+EDG LYFNMMKDVYAIKPKVEH+T
Sbjct: 726  GKEAIRLFEKMRYEGMIPNEVTFIGVLAACSHAGLIEDGRLYFNMMKDVYAIKPKVEHFT 785

Query: 501  CMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQ 560
            CMVDLYGRAG LNEVK+FIYENDLSHL+ VWKAFLSSC LY+D+EMG WVSE+LFRLEP 
Sbjct: 786  CMVDLYGRAGRLNEVKKFIYENDLSHLNAVWKAFLSSCQLYKDIEMGNWVSERLFRLEPL 845

Query: 561  DEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQ 620
            DEG Y+LLSNMCS +QKW+EA R R  MQH GI+KTPGQSWIH+KNQVHSFVAGDRSHPQ
Sbjct: 846  DEGPYILLSNMCSSNQKWEEAFRTRRFMQHRGISKTPGQSWIHVKNQVHSFVAGDRSHPQ 905

Query: 621  HAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAI 680
            HAQIYEYLD LIGRLKEIGYL DVKLVMQDVEEEQGEVLLGWHSEKLA+AYG+ISL SAI
Sbjct: 906  HAQIYEYLDNLIGRLKEIGYLFDVKLVMQDVEEEQGEVLLGWHSEKLAIAYGLISLDSAI 965

Query: 681  PIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
            PIRIMKNLR+CTDCHNFMKLTSQLL REIIVRDI RFHHFNSGHCSCGDYW
Sbjct: 966  PIRIMKNLRMCTDCHNFMKLTSQLLCREIIVRDIHRFHHFNSGHCSCGDYW 1014

[Close]

BLAST of IVF0025956.5 vs. NCBI nr
Match: XP_008441858.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo])

HSP 1 Score: 1456 bits (3768), Expect = 0.0
Identity = 714/714 (100.00%), Postives = 714/714 (100.00%), Query Frame = 0


Query: 18   KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW 77
            KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW
Sbjct: 299  KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTW 358

Query: 78   TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR 137
            TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR
Sbjct: 359  TAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILR 418

Query: 138  NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL 197
            NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL
Sbjct: 419  NGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHL 478

Query: 198  FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL 257
            FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL
Sbjct: 479  FRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLIL 538

Query: 258  ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS 317
            ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS
Sbjct: 539  ELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCS 598

Query: 318  DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG 377
            DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG
Sbjct: 599  DTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELG 658

Query: 378  RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL 437
            RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL
Sbjct: 659  RQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSL 718

Query: 438  HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE 497
            HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE
Sbjct: 719  HGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVE 778

Query: 498  HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL 557
            HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL
Sbjct: 779  HYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRL 838

Query: 558  EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS 617
            EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS
Sbjct: 839  EPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRS 898

Query: 618  HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG 677
            HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG
Sbjct: 899  HPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLG 958

Query: 678  SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 731
            SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW
Sbjct: 959  SAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 1012

[Close]

BLAST of IVF0025956.5 vs. NCBI nr
Match: KAA0049879.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK07617.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1415 bits (3662), Expect = 0.0
Identity = 694/695 (99.86%), Postives = 695/695 (100.00%), Query Frame = 0


Query: 37  VKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL 96
           +KIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL
Sbjct: 196 LKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQL 255

Query: 97  FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK 156
           FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK
Sbjct: 256 FREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAK 315

Query: 157 FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL 216
           FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL
Sbjct: 316 FDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGL 375

Query: 217 MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG 276
           MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG
Sbjct: 376 MQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDG 435

Query: 277 FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN 336
           FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN
Sbjct: 436 FVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRN 495

Query: 337 GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA 396
           GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA
Sbjct: 496 GKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLA 555

Query: 397 SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI 456
           SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI
Sbjct: 556 SSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGI 615

Query: 457 IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK 516
           IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK
Sbjct: 616 IPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVK 675

Query: 517 EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ 576
           EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ
Sbjct: 676 EFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQ 735

Query: 577 KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK 636
           KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK
Sbjct: 736 KWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLK 795

Query: 637 EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN 696
           EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN
Sbjct: 796 EIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHN 855

Query: 697 FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 731
           FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW
Sbjct: 856 FMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 890

[Close]

BLAST of IVF0025956.5 vs. NCBI nr
Match: XP_011648996.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis sativus])

HSP 1 Score: 1405 bits (3638), Expect = 0.0
Identity = 690/719 (95.97%), Postives = 701/719 (97.50%), Query Frame = 0


Query: 13   HRLFKKFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNR 72
            H LFK F YHTSN FSSNTLHAKMVKIGSI  SGKFVLTSYVKS+KLNDAQKLFDEMPNR
Sbjct: 299  HHLFKSFSYHTSNHFSSNTLHAKMVKIGSIFVSGKFVLTSYVKSEKLNDAQKLFDEMPNR 358

Query: 73   DVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIH 132
            DVLTWTA+ISGFSRVN SGMALQLFREMLVEGV PNHFTLSTVLKLCSKVGDVRMGKGIH
Sbjct: 359  DVLTWTALISGFSRVNSSGMALQLFREMLVEGVSPNHFTLSTVLKLCSKVGDVRMGKGIH 418

Query: 133  GWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVN 192
            GWILRNGVKLDVVLENS+LDLYAKFDEFVYARKLYDSM EKSTDTDNIILGVYVRSCDVN
Sbjct: 419  GWILRNGVKLDVVLENSMLDLYAKFDEFVYARKLYDSMREKSTDTDNIILGVYVRSCDVN 478

Query: 193  KSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVAS 252
            KSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSV S
Sbjct: 479  KSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVVS 538

Query: 253  SLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGS 312
            SLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYS+LPSGFATKQ S
Sbjct: 539  SLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSRLPSGFATKQSS 598

Query: 313  NIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAG 372
            NIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIA+VVSAC+NAG
Sbjct: 599  NIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIANVVSACSNAG 658

Query: 373  VLELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMI 432
            VLELGRQVHGFI K+VEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMT YLNVVIWTSMI
Sbjct: 659  VLELGRQVHGFIHKTVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTNYLNVVIWTSMI 718

Query: 433  VGCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAI 492
            VGC+LHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDG LYFNMMKDVYAI
Sbjct: 719  VGCALHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGHLYFNMMKDVYAI 778

Query: 493  KPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSE 552
            KPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLS VWKAFLSSC LYRDLEMGKWVSE
Sbjct: 779  KPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSAVWKAFLSSCRLYRDLEMGKWVSE 838

Query: 553  KLFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFV 612
            KLFRL+PQDEGSYVLLSNMCSGSQKW+EASRAR SMQHSGINKTPGQSWIHLKNQVHSFV
Sbjct: 839  KLFRLKPQDEGSYVLLSNMCSGSQKWEEASRARRSMQHSGINKTPGQSWIHLKNQVHSFV 898

Query: 613  AGDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYG 672
            AGD+SHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYG
Sbjct: 899  AGDQSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYG 958

Query: 673  IISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 731
            IISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDI RFHHFNSGHCSCGDYW
Sbjct: 959  IISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDIYRFHHFNSGHCSCGDYW 1017

[Close]

BLAST of IVF0025956.5 vs. NCBI nr
Match: XP_038889548.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Benincasa hispida] >XP_038889549.1 putative pentatricopeptide repeat-containing protein At3g23330 [Benincasa hispida])

HSP 1 Score: 1315 bits (3402), Expect = 0.0
Identity = 639/731 (87.41%), Postives = 682/731 (93.30%), Query Frame = 0


Query: 1   MTQKIISFNLFEHRLFKKFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLN 60
           M QKIISFNL EH+LFK  CYHTSN    NTLHAKMVK GSI+ESGKFVL+SYVKS+KLN
Sbjct: 27  MAQKIISFNLSEHQLFKSCCYHTSNDSLVNTLHAKMVKNGSILESGKFVLSSYVKSEKLN 86

Query: 61  DAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCS 120
           DAQKLFDEMP+RDVLTWT +ISGFSR+NCS MALQLFR+MLVEGVCPNHFTLSTVLKLCS
Sbjct: 87  DAQKLFDEMPSRDVLTWTVLISGFSRINCSEMALQLFRKMLVEGVCPNHFTLSTVLKLCS 146

Query: 121 KVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNI 180
           +VGD++MGKGIHGWILRNGV LDVVLENS+LDLYAKFD+F  A+KL+DSM EKST T NI
Sbjct: 147 RVGDMQMGKGIHGWILRNGVNLDVVLENSMLDLYAKFDDFYCAKKLFDSMREKSTATYNI 206

Query: 181 ILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFN 240
           +LGVYVRSCDVNKSL LFRN+PCRN ASWNTIICGLMQGG+LNAALELLYEMVENE EFN
Sbjct: 207 MLGVYVRSCDVNKSLDLFRNMPCRNTASWNTIICGLMQGGHLNAALELLYEMVENEPEFN 266

Query: 241 NFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYS 300
             TSSIALSV +SLLI+ELGRQVHGRI+RCGLHNDGFVKS+LINMYIKCGNLEKASVIYS
Sbjct: 267 KVTSSIALSVVASLLIIELGRQVHGRIIRCGLHNDGFVKSSLINMYIKCGNLEKASVIYS 326

Query: 301 QLPSGFATKQGSNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFT 360
           Q+PSGF TKQ SNIVCSD MTEIVSRSSMV GY+ NGKYE+AFKT VSMVRERVLMDKFT
Sbjct: 327 QMPSGFVTKQDSNIVCSDMMTEIVSRSSMVSGYIWNGKYENAFKTVVSMVRERVLMDKFT 386

Query: 361 IASVVSACANAGVLELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMT 420
           IASVVSAC+NAGVLELGRQ+HG+IQK+ EQLDAHLASSLIDMYAKGGSLDCAHRIF+Q T
Sbjct: 387 IASVVSACSNAGVLELGRQIHGYIQKTGEQLDAHLASSLIDMYAKGGSLDCAHRIFEQTT 446

Query: 421 YYLNVVIWTSMIVGCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGL 480
            YLNVV+WTSMI G +LHG GKEAIRLFE+MRYEGIIPNEVTF+GVLTACSHAGLLE G 
Sbjct: 447 NYLNVVLWTSMIAGYALHGQGKEAIRLFERMRYEGIIPNEVTFVGVLTACSHAGLLEHGR 506

Query: 481 LYFNMMKDVYAIKPKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLL 540
           LYFNMMKDVYAIKPKVEH+TCMVDLYGRAG LNEVKEFIYENDLSHLS VWKAFLSSC L
Sbjct: 507 LYFNMMKDVYAIKPKVEHFTCMVDLYGRAGCLNEVKEFIYENDLSHLSAVWKAFLSSCRL 566

Query: 541 YRDLEMGKWVSEKLFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQS 600
           Y++LEMG WVSEKLF LE QDEGSYVLLSNMCSGSQKW+EASR R SMQH GINKTPGQS
Sbjct: 567 YKNLEMGNWVSEKLFSLEQQDEGSYVLLSNMCSGSQKWEEASRTRRSMQHRGINKTPGQS 626

Query: 601 WIHLKNQVHSFVAGDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLL 660
           WIH+KNQVHSFVAGD+SHPQH QIYEYLDKLIGRLKEIGYL+DVKLVMQDVEEEQGEVLL
Sbjct: 627 WIHVKNQVHSFVAGDQSHPQHVQIYEYLDKLIGRLKEIGYLYDVKLVMQDVEEEQGEVLL 686

Query: 661 GWHSEKLAVAYGIISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHF 720
           GWHSEKLA+AYGIISLGSAIPIRIMKNLR+CTDCHNFMKLTSQLLGREIIVRDI RFH F
Sbjct: 687 GWHSEKLALAYGIISLGSAIPIRIMKNLRVCTDCHNFMKLTSQLLGREIIVRDIHRFHRF 746

Query: 721 NSGHCSCGDYW 731
           NSGHCSCGDYW
Sbjct: 747 NSGHCSCGDYW 757

[Close]

BLAST of IVF0025956.5 vs. NCBI nr
Match: XP_022929759.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moschata])

HSP 1 Score: 1254 bits (3246), Expect = 0.0
Identity = 613/711 (86.22%), Postives = 658/711 (92.55%), Query Frame = 0


Query: 21   YHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAI 80
            +H+SN    NTLHAKMVK GSI ES KF+L+SYVKS+KLNDA+K+FDEMP+RDVLTWT +
Sbjct: 306  FHSSNDSLPNTLHAKMVKNGSIFESRKFILSSYVKSEKLNDARKVFDEMPSRDVLTWTVL 365

Query: 81   ISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGV 140
            ISGF+RVNCS MALQLFREMLVEGVCPN FTLSTVLKLCS+VGDV+MGKGIHGWILR+GV
Sbjct: 366  ISGFARVNCSEMALQLFREMLVEGVCPNPFTLSTVLKLCSRVGDVKMGKGIHGWILRSGV 425

Query: 141  KLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRN 200
             LDVVLENS+LDLYAKFDEF Y  KL+DSM EKST T NI+LGV+VRS DVNKSL LFRN
Sbjct: 426  SLDVVLENSMLDLYAKFDEFDYVTKLFDSMREKSTATYNILLGVHVRS-DVNKSLDLFRN 485

Query: 201  LPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELG 260
            LPCR+ ASWNT+ICGLMQGGYLN ALELLYEMVENE EFN  TSSIALSV SSLLI+ELG
Sbjct: 486  LPCRDTASWNTVICGLMQGGYLNEALELLYEMVENEPEFNKVTSSIALSVVSSLLIIELG 545

Query: 261  RQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTM 320
            RQVHGRIVRCGLHNDGFVKS+LINMYIKCGNLEKASVIYSQ+PSGFATKQ  NIVCSDTM
Sbjct: 546  RQVHGRIVRCGLHNDGFVKSSLINMYIKCGNLEKASVIYSQMPSGFATKQDFNIVCSDTM 605

Query: 321  TEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQV 380
            TEIVSRSSMV GYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSAC+NAGV ELGRQ+
Sbjct: 606  TEIVSRSSMVSGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACSNAGVFELGRQI 665

Query: 381  HGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGH 440
            H +IQK+ EQLDAHL SSLIDMYAKGGSLDCA +IF+Q TY LNVVIWTSMI GC+LHG 
Sbjct: 666  HAYIQKTGEQLDAHLTSSLIDMYAKGGSLDCARQIFEQTTY-LNVVIWTSMITGCALHGQ 725

Query: 441  GKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYT 500
            GKEAIRLFE+MRYEG+IPNEVTFIGVL ACSHAGLLEDG LYFNMMKDVYAIKPKVEH+T
Sbjct: 726  GKEAIRLFEKMRYEGMIPNEVTFIGVLAACSHAGLLEDGRLYFNMMKDVYAIKPKVEHFT 785

Query: 501  CMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQ 560
            CMVDLYGRAG LNEVK+FIYENDLSHL+ VWKAFLSSC LY+D+EMG WVSE+LFRLEP 
Sbjct: 786  CMVDLYGRAGHLNEVKKFIYENDLSHLNAVWKAFLSSCQLYKDIEMGNWVSERLFRLEPL 845

Query: 561  DEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQ 620
            DEG YVLLSNMCS +QKW+EA R R SMQH GI+KTPGQSWIH+KN+VHSFVAGDRSHPQ
Sbjct: 846  DEGPYVLLSNMCSSNQKWEEAFRTRRSMQHRGISKTPGQSWIHVKNRVHSFVAGDRSHPQ 905

Query: 621  HAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAI 680
            HAQIYEYLDKLIGRLKEIGYL DVKLVMQDVEEEQGEVLLGWHSEKLA+AYG+ISLGS+I
Sbjct: 906  HAQIYEYLDKLIGRLKEIGYLFDVKLVMQDVEEEQGEVLLGWHSEKLAIAYGLISLGSSI 965

Query: 681  PIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 731
            PIRIMKNLRICTDCHNFMKLTSQLL REIIVRDI RFHHFNSGHCSCGDYW
Sbjct: 966  PIRIMKNLRICTDCHNFMKLTSQLLCREIIVRDIHRFHHFNSGHCSCGDYW 1014

[Close]

BLAST of IVF0025956.5 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 525.4 bits (1352), Expect = 7.3e-149
Identity = 265/706 (37.54%), Postives = 431/706 (61.05%), Query Frame = 0


Query: 32  LHAKMVKIGSIIE-SGKFVLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCS 91
           LHA+ ++  S+   S   V++ Y   K L++A  LF  + +  VL W ++I  F+  +  
Sbjct: 27  LHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLF 86

Query: 92  GMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSL 151
             AL  F EM   G CP+H    +VLK C+ + D+R G+ +HG+I+R G+  D+   N+L
Sbjct: 87  SKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNAL 146

Query: 152 LDLYAK---FDEFVYARKLYDSMGEKSTDT--DNIILGVYVRSCDVNKSLHLFRNLPCRN 211
           +++YAK       +    ++D M ++++++  +++     +    ++    +F  +P ++
Sbjct: 147 MNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKD 206

Query: 212 AASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELGRQVHG 271
             S+NTII G  Q G    AL ++ EM   + + ++FT S  L + S  + +  G+++HG
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266

Query: 272 RIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTMTEIVS 331
            ++R G+ +D ++ S+L++MY K   +E +  ++S+L             C D     +S
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL------------YCRDG----IS 326

Query: 332 RSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQ 391
            +S+V GYV+NG+Y +A + F  MV  +V       +SV+ ACA+   L LG+Q+HG++ 
Sbjct: 327 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 386

Query: 392 KSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAI 451
           +     +  +AS+L+DMY+K G++  A +IFD+M   L+ V WT++I+G +LHGHG EA+
Sbjct: 387 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN-VLDEVSWTAIIMGHALHGHGHEAV 446

Query: 452 RLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDL 511
            LFE+M+ +G+ PN+V F+ VLTACSH GL+++   YFN M  VY +  ++EHY  + DL
Sbjct: 447 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 506

Query: 512 YGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSY 571
            GRAG L E   FI +  +     VW   LSSC ++++LE+ + V+EK+F ++ ++ G+Y
Sbjct: 507 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 566

Query: 572 VLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIY 631
           VL+ NM + + +W+E ++ R  M+  G+ K P  SWI +KN+ H FV+GDRSHP   +I 
Sbjct: 567 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 626

Query: 632 EYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIM 691
           E+L  ++ ++++ GY+ D   V+ DV+EE    LL  HSE+LAVA+GII+      IR+ 
Sbjct: 627 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 686

Query: 692 KNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           KN+RICTDCH  +K  S++  REIIVRD  RFHHFN G+CSCGDYW
Sbjct: 687 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of IVF0025956.5 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-146
Identity = 263/701 (37.52%), Postives = 423/701 (60.34%), Query Frame = 0


Query: 49  VLTSYVKSKKLNDAQKLFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPN 108
           VL++Y K   ++   + FD++P RD ++WT +I G+  +     A+++  +M+ EG+ P 
Sbjct: 86  VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145

Query: 109 HFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYD 168
            FTL+ VL   +    +  GK +H +I++ G++ +V + NSLL++YAK  + + A+ ++D
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205

Query: 169 SMGEKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALEL 228
            M  +   + N ++ ++++   ++ ++  F  +  R+  +WN++I G  Q GY   AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265

Query: 229 LYEMVENE-SEFNNFTSSIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYI 288
             +M+ +     + FT +  LS  ++L  L +G+Q+H  IV  G    G V +ALI+MY 
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325

Query: 289 KCGNLEKASVIYSQLPS------GFAT-----------KQGSNIVCSDTMTEIVSRSSMV 348
           +CG +E A  +  Q  +      GF              Q  NI  S    ++V+ ++M+
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385

Query: 349 YGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQVHGFIQKSVEQ 408
            GY ++G Y +A   F SMV      + +T+A+++S  ++   L  G+Q+HG   KS E 
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445

Query: 409 LDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLHGHGKEAIRLFEQ 468
               ++++LI MYAK G++  A R FD +    + V WTSMI+  + HGH +EA+ LFE 
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505

Query: 469 MRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEHYTCMVDLYGRAG 528
           M  EG+ P+ +T++GV +AC+HAGL+  G  YF+MMKDV  I P + HY CMVDL+GRAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565

Query: 529 LLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLEPQDEGSYVLLSN 588
           LL E +EFI +  +    V W + LS+C +++++++GK  +E+L  LEP++ G+Y  L+N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625

Query: 589 MCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSHPQHAQIYEYLDK 648
           + S   KW+EA++ R SM+   + K  G SWI +K++VH F   D +HP+  +IY  + K
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685

Query: 649 LIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGSAIPIRIMKNLRI 708
           +   +K++GY+ D   V+ D+EEE  E +L  HSEKLA+A+G+IS      +RIMKNLR+
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745

Query: 709 CTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           C DCH  +K  S+L+GREIIVRD  RFHHF  G CSC DYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

[Close]

BLAST of IVF0025956.5 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 469.2 bits (1206), Expect = 6.2e-132
Identity = 245/716 (34.22%), Postives = 399/716 (55.73%), Query Frame = 0


Query: 20   CYHTSNSFSSNTLHAKMVKIG----SIIESGKFVLTSYVKSKKLNDAQKLFDEMPNRDVL 79
            C      F    LHA   K+G    + IE    +L  Y K   +  A   F E    +V+
Sbjct: 399  CSADGTLFRGQQLHAYTTKLGFASNNKIEGA--LLNLYAKCADIETALDYFLETEVENVV 458

Query: 80   TWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWI 139
             W  ++  +  ++    + ++FR+M +E + PN +T  ++LK C ++GD+ +G+ IH  I
Sbjct: 459  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 518

Query: 140  LRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSL 199
            ++   +L+  + + L+D+YAK             +G+  T  D +I              
Sbjct: 519  IKTNFQLNAYVCSVLIDMYAK-------------LGKLDTAWDILI-------------- 578

Query: 200  HLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLL 259
                    ++  SW T+I G  Q  + + AL    +M++     +    + A+S  + L 
Sbjct: 579  ----RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 638

Query: 260  ILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIV 319
             L+ G+Q+H +    G  +D   ++AL+ +Y +CG +E++ + + Q      T+ G NI 
Sbjct: 639  ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ------TEAGDNI- 698

Query: 320  CSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLE 379
                     + +++V G+ ++G  E+A + FV M RE +  + FT  S V A +    ++
Sbjct: 699  ---------AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 758

Query: 380  LGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGC 439
             G+QVH  I K+    +  + ++LI MYAK GS+  A + F +++   N V W ++I   
Sbjct: 759  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAY 818

Query: 440  SLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPK 499
            S HG G EA+  F+QM +  + PN VT +GVL+ACSH GL++ G+ YF  M   Y + PK
Sbjct: 819  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 878

Query: 500  VEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLF 559
             EHY C+VD+  RAGLL+  KEFI E  +   ++VW+  LS+C++++++E+G++ +  L 
Sbjct: 879  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 938

Query: 560  RLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGD 619
             LEP+D  +YVLLSN+ + S+KW      R  M+  G+ K PGQSWI +KN +HSF  GD
Sbjct: 939  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 998

Query: 620  RSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIIS 679
            ++HP   +I+EY   L  R  EIGY+ D   ++ +++ EQ + ++  HSEKLA+++G++S
Sbjct: 999  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1058

Query: 680  LGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
            L + +PI +MKNLR+C DCH ++K  S++  REIIVRD  RFHHF  G CSC DYW
Sbjct: 1059 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]

BLAST of IVF0025956.5 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 468.8 bits (1205), Expect = 8.1e-132
Identity = 257/718 (35.79%), Postives = 402/718 (55.99%), Query Frame = 0


Query: 18  KFCYHTSNSFSSNTLHAKMVKIGSIIESGKFVLTS----YVKSKKLNDAQKLFDEMPNRD 77
           K C   +       +H  +VK G  ++   F +T     Y K +++N+A+K+FD MP RD
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLD--LFAMTGLENMYAKCRQVNEARKVFDRMPERD 202

Query: 78  VLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHG 137
           +++W  I++G+S+   + MAL++ + M  E + P+  T+ +VL   S +  + +GK IHG
Sbjct: 203 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 262

Query: 138 WILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNK 197
           + +R+G    V +  +L+D+YAK      AR+L+D M E                     
Sbjct: 263 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE--------------------- 322

Query: 198 SLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASS 257
                     RN  SWN++I   +Q      A+ +  +M++   +  + +   AL   + 
Sbjct: 323 ----------RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 382

Query: 258 LLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSN 317
           L  LE GR +H   V  GL  +  V ++LI+MY KC  ++ A+ ++ +L S         
Sbjct: 383 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS--------- 442

Query: 318 IVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGV 377
                    +VS ++M+ G+ +NG+  DA   F  M    V  D FT  SV++A A   +
Sbjct: 443 -------RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 502

Query: 378 LELGRQVHGFIQKSVEQLDAHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIV 437
               + +HG + +S    +  + ++L+DMYAK G++  A  IFD M+   +V  W +MI 
Sbjct: 503 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 562

Query: 438 GCSLHGHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIK 497
           G   HG GK A+ LFE+M+   I PN VTF+ V++ACSH+GL+E GL  F MMK+ Y+I+
Sbjct: 563 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 622

Query: 498 PKVEHYTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEK 557
             ++HY  MVDL GRAG LNE  +FI +  +     V+ A L +C +++++   +  +E+
Sbjct: 623 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 682

Query: 558 LFRLEPQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVA 617
           LF L P D G +VLL+N+   +  W++  + R SM   G+ KTPG S + +KN+VHSF +
Sbjct: 683 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFS 742

Query: 618 GDRSHPQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGI 677
           G  +HP   +IY +L+KLI  +KE GY+ D  LV+  VE +  E LL  HSEKLA+++G+
Sbjct: 743 GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGL 802

Query: 678 ISLGSAIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
           ++  +   I + KNLR+C DCHN  K  S + GREI+VRD+ RFHHF +G CSCGDYW
Sbjct: 803 LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]

BLAST of IVF0025956.5 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 454.9 bits (1169), Expect = 1.2e-127
Identity = 239/713 (33.52%), Postives = 404/713 (56.66%), Query Frame = 0


Query: 28  SSNTLHAKMVKIGSIIESGKFVLTSYVK-------SKKLNDAQKLFDEMPNRDVLTWTAI 87
           S   +HA+M+KIG  + +  + L+  ++        + L  A  +F  +   ++L W  +
Sbjct: 48  SLRIIHAQMIKIG--LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 107

Query: 88  ISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGV 147
             G +  +    AL+L+  M+  G+ PN +T   VLK C+K    + G+ IHG +L+ G 
Sbjct: 108 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 167

Query: 148 KLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGVYVRSCDVNKSLHLFRN 207
            LD+ +  SL+ +Y +      A K++D    +   +   ++  Y     +  +  LF  
Sbjct: 168 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 227

Query: 208 LPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVASSLLILELG 267
           +P ++  SWN +I G  + G    ALEL  +M++     +  T    +S  +    +ELG
Sbjct: 228 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 287

Query: 268 RQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPSGFATKQGSNIVCSDTM 327
           RQVH  I   G  ++  + +ALI++Y KCG LE A  ++ +LP                 
Sbjct: 288 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----------------Y 347

Query: 328 TEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASVVSACANAGVLELGRQV 387
            +++S ++++ GY     Y++A   F  M+R     +  T+ S++ ACA+ G +++GR +
Sbjct: 348 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 407

Query: 388 HGFIQKSVEQLD--AHLASSLIDMYAKGGSLDCAHRIFDQMTYYLNVVIWTSMIVGCSLH 447
           H +I K ++ +   + L +SLIDMYAK G ++ AH++F+ +  + ++  W +MI G ++H
Sbjct: 408 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 467

Query: 448 GHGKEAIRLFEQMRYEGIIPNEVTFIGVLTACSHAGLLEDGLLYFNMMKDVYAIKPKVEH 507
           G    +  LF +MR  GI P+++TF+G+L+ACSH+G+L+ G   F  M   Y + PK+EH
Sbjct: 468 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 527

Query: 508 YTCMVDLYGRAGLLNEVKEFIYENDLSHLSVVWKAFLSSCLLYRDLEMGKWVSEKLFRLE 567
           Y CM+DL G +GL  E +E I   ++    V+W + L +C ++ ++E+G+  +E L ++E
Sbjct: 528 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 587

Query: 568 PQDEGSYVLLSNMCSGSQKWQEASRARSSMQHSGINKTPGQSWIHLKNQVHSFVAGDRSH 627
           P++ GSYVLLSN+ + + +W E ++ R+ +   G+ K PG S I + + VH F+ GD+ H
Sbjct: 588 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFH 647

Query: 628 PQHAQIYEYLDKLIGRLKEIGYLHDVKLVMQDVEEEQGEVLLGWHSEKLAVAYGIISLGS 687
           P++ +IY  L+++   L++ G++ D   V+Q++EEE  E  L  HSEKLA+A+G+IS   
Sbjct: 648 PRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKP 707

Query: 688 AIPIRIMKNLRICTDCHNFMKLTSQLLGREIIVRDICRFHHFNSGHCSCGDYW 732
              + I+KNLR+C +CH   KL S++  REII RD  RFHHF  G CSC DYW
Sbjct: 708 GTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

The following BLAST results are available for this feature:

BLAST of IVF0025956.5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW63	1.0e-147	37.54	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9SHZ8	3.7e-145	37.52	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
Q9SVP7	8.8e-131	34.22	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]
Q3E6Q1	1.1e-130	35.79	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9LN01	1.7e-126	33.52	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]

BLAST of IVF0025956.5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4E3	0.0e+00	100.00	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23...	[more]
A0A0A0LKI4	0.0e+00	95.76	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0742...	[more]
A0A5D3C6T4	0.0e+00	99.86	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1EPP7	0.0e+00	86.22	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita mosc...	[more]
A0A6J1KA70	0.0e+00	84.81	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxi...	[more]

BLAST of IVF0025956.5 vs. NCBI nr


Match Name	Identity	Description
XP_008441858.1	100.00	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
KAA0049879.1	99.86	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ...	[more]
XP_011648996.1	95.97	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23...	[more]
XP_038889548.1	87.41	putative pentatricopeptide repeat-containing protein At3g23330 [Benincasa hispid...	[more]
XP_022929759.1	86.22	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moscha...	[more]

BLAST of IVF0025956.5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23330.1	7.3e-149	37.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22070.1	2.6e-146	37.52	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G13650.1	6.2e-132	34.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	8.1e-132	35.79	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	1.2e-127	33.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 597..720 e-value: 2.4E-39 score: 134.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 394..620 e-value: 2.3E-36 score: 127.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 43..129 e-value: 1.7E-19 score: 71.9 coord: 256..377 e-value: 5.0E-13 score: 50.8 coord: 163..255 e-value: 2.1E-11 score: 45.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 325..353 e-value: 1.8E-4 score: 21.5 coord: 148..173 e-value: 0.83 score: 10.0 coord: 208..235 e-value: 1.6E-4 score: 21.7 coord: 498..520 e-value: 0.14 score: 12.4 coord: 280..301 e-value: 0.45 score: 10.9 coord: 397..419 e-value: 0.057 score: 13.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 424..471 e-value: 4.5E-10 score: 39.6 coord: 73..119 e-value: 5.4E-10 score: 39.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 208..237 e-value: 5.9E-5 score: 21.0 coord: 76..108 e-value: 1.1E-6 score: 26.5 coord: 327..357 e-value: 5.2E-5 score: 21.1 coord: 426..460 e-value: 2.7E-5 score: 22.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 11.509422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 205..239 score: 9.13082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 73..107 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 8.889672
None	No IPR available	PANTHER	PTHR24015:SF1922	OS07G0239600 PROTEIN	coord: 18..712
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 18..712

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0025956	IVF0025956	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0025956.5-exon	IVF0025956.5-exon-chr05:17375429..17378681	exon
IVF0025956.5-exon	IVF0025956.5-exon-chr05:17378760..17379362	exon
IVF0025956.5-exon	IVF0025956.5-exon-chr05:17379980..17380797	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0025956.5-three_prime_utr	IVF0025956.5-three_prime_utr-chr05:17375429..17376396	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0025956.5-cds	IVF0025956.5-cds-chr05:17376397..17378592	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0025956.5-five_prime_utr	IVF0025956.5-five_prime_utr-chr05:17378593..17378681	five_prime_UTR
IVF0025956.5-five_prime_utr	IVF0025956.5-five_prime_utr-chr05:17378760..17379362	five_prime_UTR
IVF0025956.5-five_prime_utr	IVF0025956.5-five_prime_utr-chr05:17379980..17380797	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0025956.5	IVF0025956.5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding