
IVF0024405.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCATATCAATTTCTATCTTCCAACCCGGTTTAACTCCAAGCAAACCGAACCGATCGTTTCCCTATAAAATCCGGCCCCACCTAAATTCTTGCAGACTCCGCTTCAGTTGCAATTGCAATCAATTTCGATCTTCTTCTTCAGTTTCAGTTTGTTCCTTCCATTTTTCTCTTGTTCGAAATTAAGTTTCGATGGAATGCTGGGGATTAATTTTACCAATCCCTGTATAGTTTTAACAAGCTGATGATTCTTTTAACTCCCTCTGCCGGCTTTCTTCCAAGCTGCTCAAACACCCACCGTCCGCCGGAATCACAACGATCACATCCTCAAAAGATTTTCTATAAATTCGATCAAATTCTTCGTAAAAAACCTTCCGGATCACCCTTACCCCTCAATGCACTGCCAAAATCGTAAGTTTCTCTTTCATTCATTTTCACAAACAGGTTATGTGCATATCTATGGAATCCCACGTATGTGTTTGGCTTTTGATTTTGTAGGTGCGAGTGTTTCGATTTGCATCAAAATCTAATACCCTATGGGGATGCATGGTCTTGGCAAAAGGAAATTGTGAGAGAAAAAGTGGGATTGATCGATGCGAACCAGGATTGCCCAGATACGTTAATTGTTTTGCAGCATCATCCTGTGTACACAATGGGCACTAACAGTACAGAAGAGTATTTCAATTTTGATCTCAAGGATTCTCCATTTCCCATTTATCGAACTGAGCGTGGAGGGGAGGTTACTTATCATGGCCCTGGCCAGGTACTTGATCAAAATTTCTAACAAATAATCTAAGGATTTTATGTGACTTCTTTGATAGCGTTTGCTTATCATTCTTCACAAGGATATATTTGCTGTTACAGAGTAGTCTTTTTGTATGGCTCAACATTTTGCTCTTCGATTTATTCAAAAGTATCAATGTTCTTTCAAAAGTTGTGAAATTACCTCTAGGTGTAGATATCCTTTAGAATTTCAAATGAAAATTGAAACTTAGAATAATGTGTGAAAACTCGAAATGATTTGAGTATCCAAATTTTTGTTCCAAGTCACTACCAAACCCGTTCTAAACCGAACTGGTTTAATGTTGCGAATTTTTATTCGAAGGAAAGGTGACGGGCAGACTATGATATTATATTTTTGAACATAGGAAAAGGGCAAAGTAAATTTTTTTAAAAAAAATTTAATCACTAAAATTGTAATTGAACCTTTTTATTTGAACCATTTTACATTAAATTTAGAGTCTAAATACCTTTTTCTCAGCCACCATGGAGTAGTCTAGAAGTAAATAGGAAGCATGGACTCGATAAAAGAAAACTAAGAAATCATAAATTCAATCCATTAGTCACCATCTACCTAGATGAGGTAGATAAGTTTTATTTGTAGGATCAATTCGATGCGCATGGAATATGGACGTTAAAAAAATACACACATACCTTTTCTCAAATCAGTTTTAGCTATATTCTTCACGACGATTTGTTAATTTGAAAGTTAAATCTCGGAGTTGCTAGTTCGTTTAGTTTTATAGTATCGTTTACTATTTTTATGAGGTTTTTACATGACATTGATAGGATTTGCCCTGTGCTGTAGCTAGTTATGTACCCTATTGTCAATCTGCGAAATCACAAGATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCGTTATACGCGTTCTTTCCTCAACGTTTTCAATCAATGCCCATCGAATTGATGGTTTAACAGGTGTCTGGGCAGGTATTCCTTTTTGTGTTCCGATGAAATTTGTATATTATTCCAAGTGCTCGCCTTTTCTCTTATGTTTCTGTATGTAGCATATTCTAAATGCTACATTCATTCCTCCCCGCTTCGACATTCGGCATAGCAAATTTCTTGAATGATTTTCCTTTGCAGGAAACCAGAAACTTGCAGCCATTGGAATTCGGGTATCGAAATGGATAACATTTCATGGATTAGCCCTCAATGTTACCACTGATCTAACTCCATTTAATTGGATAGTTCCATGTGGAATACGAAACCGGAAGGTCGGAAACATCAAAGAGTTGCTAAGAGAAGTTGATTTACACACTGGATTTCAGAAAGATTCCCAGTTGATAGATATCACTTTTGGAGCTCTAATACAGGAATTCTCTGAAGTTTTTCAACTTGATATGTATCATAAAACCATCCCTTCTTTGGAGTTCTTGAAGCAAATTCCCAACAACTCCCCTGGTGAGATATCTTATAATCTCTAAACTGTAGATGTTAAATGTTACCCACTCTTAATTTATACCATTTGATTTGATTTGACATAAAAGGTTTTGAAAATGTTGTAGCTTTCTGAAAATTTTTATAATGATGTAAATGAAAGAAAGAACTACTTGAACTAAACTTCTATGTGTATGCCTAAGCTGTCATAATATAAGGTTTTTTTTCTTTTTAGTTTAATGATTGAGGATTGAGTTTATAGAGATGGAATCATCAATCTTTAATCTTTTGAGATGGTAAAATTGGAACTATGAAGAACTGGGAGTGTTAGGATTAGAATTTTTAAATGGTATTTAGTTTATCGATATAAATTGTATCAAATCACTCGTCACATTCAAAACCACCTCAAAACACATTTTTAATCCCTCAAAAAATTTAATTACTATTAGAATAGAGTTTTCAATGATTAAAAACAATTTTCAAATGACAAAAAATGATTTAAATAATTTCATAATTACTTCCAAACATGTCA ATTTCATATCAATTTCTATCTTCCAACCCGGTTTAACTCCAAGCAAACCGAACCGATCGTTTCCCTATAAAATCCGGCCCCACCTAAATTCTTGCAGACTCCGCTTCAGTTGCAATTGCAATCAATTTCGATCTTCTTCTTCAGTTTCAGTTTGTTCCTTCCATTTTTCTCTTGTTCGAAATTAAGTTTCGATGGAATGCTGGGGATTAATTTTACCAATCCCTGTATAGTTTTAACAAGCTGATGATTCTTTTAACTCCCTCTGCCGGCTTTCTTCCAAGCTGCTCAAACACCCACCGTCCGCCGGAATCACAACGATCACATCCTCAAAAGATTTTCTATAAATTCGATCAAATTCTTCGTAAAAAACCTTCCGGATCACCCTTACCCCTCAATGCACTGCCAAAATCGTGCGAGTGTTTCGATTTGCATCAAAATCTAATACCCTATGGGGATGCATGGTCTTGGCAAAAGGAAATTGTGAGAGAAAAAGTGGGATTGATCGATGCGAACCAGGATTGCCCAGATACGTTAATTGTTTTGCAGCATCATCCTGTGTACACAATGGGCACTAACAGTACAGAAGAGTATTTCAATTTTGATCTCAAGGATTCTCCATTTCCCATTTATCGAACTGAGCGTGGAGGGGAGGTTACTTATCATGGCCCTGGCCAGCTAGTTATGTACCCTATTGTCAATCTGCGAAATCACAAGATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCGTTATACGCGTTCTTTCCTCAACGTTTTCAATCAATGCCCATCGAATTGATGGTTTAACAGGTGTCTGGGCAGGAAACCAGAAACTTGCAGCCATTGGAATTCGGGTATCGAAATGGATAACATTTCATGGATTAGCCCTCAATGTTACCACTGATCTAACTCCATTTAATTGGATAGTTCCATGTGGAATACGAAACCGGAAGGTCGGAAACATCAAAGAGTTGCTAAGAGAAGTTGATTTACACACTGGATTTCAGAAAGATTCCCAGTTGATAGATATCACTTTTGGAGCTCTAATACAGGAATTCTCTGAAGTTTTTCAACTTGATATGTATCATAAAACCATCCCTTCTTTGGAGTTCTTGAAGCAAATTCCCAACAACTCCCCTGGTGAGATATCTTATAATCTCTAAACTGTAGATGTTAAATGTTACCCACTCTTAATTTATACCATTTGATTTGATTTGACATAAAAGGTTTTGAAAATGTTGTAGCTTTCTGAAAATTTTTATAATGATGTAAATGAAAGAAAGAACTACTTGAACTAAACTTCTATGTGTATGCCTAAGCTGTCATAATATAAGGTTTTTTTTCTTTTTAGTTTAATGATTGAGGATTGAGTTTATAGAGATGGAATCATCAATCTTTAATCTTTTGAGATGGTAAAATTGGAACTATGAAGAACTGGGAGTGTTAGGATTAGAATTTTTAAATGGTATTTAGTTTATCGATATAAATTGTATCAAATCACTCGTCACATTCAAAACCACCTCAAAACACATTTTTAATCCCTCAAAAAATTTAATTACTATTAGAATAGAGTTTTCAATGATTAAAAACAATTTTCAAATGACAAAAAATGATTTAAATAATTTCATAATTACTTCCAAACATGTCA ATGATTCTTTTAACTCCCTCTGCCGGCTTTCTTCCAAGCTGCTCAAACACCCACCGTCCGCCGGAATCACAACGATCACATCCTCAAAAGATTTTCTATAAATTCGATCAAATTCTTCGTAAAAAACCTTCCGGATCACCCTTACCCCTCAATGCACTGCCAAAATCGTGCGAGTGTTTCGATTTGCATCAAAATCTAATACCCTATGGGGATGCATGGTCTTGGCAAAAGGAAATTGTGAGAGAAAAAGTGGGATTGATCGATGCGAACCAGGATTGCCCAGATACGTTAATTGTTTTGCAGCATCATCCTGTGTACACAATGGGCACTAACAGTACAGAAGAGTATTTCAATTTTGATCTCAAGGATTCTCCATTTCCCATTTATCGAACTGAGCGTGGAGGGGAGGTTACTTATCATGGCCCTGGCCAGCTAGTTATGTACCCTATTGTCAATCTGCGAAATCACAAGATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCGTTATACGCGTTCTTTCCTCAACGTTTTCAATCAATGCCCATCGAATTGATGGTTTAACAGGTGTCTGGGCAGGAAACCAGAAACTTGCAGCCATTGGAATTCGGGTATCGAAATGGATAACATTTCATGGATTAGCCCTCAATGTTACCACTGATCTAACTCCATTTAATTGGATAGTTCCATGTGGAATACGAAACCGGAAGGTCGGAAACATCAAAGAGTTGCTAAGAGAAGTTGATTTACACACTGGATTTCAGAAAGATTCCCAGTTGATAGATATCACTTTTGGAGCTCTAATACAGGAATTCTCTGAAGTTTTTCAACTTGATATGTATCATAAAACCATCCCTTCTTTGGAGTTCTTGAAGCAAATTCCCAACAACTCCCCTGGTGAGATATCTTATAATCTCTAA MILLTPSAGFLPSCSNTHRPPESQRSHPQKIFYKFDQILRKKPSGSPLPLNALPKSCECFDLHQNLIPYGDAWSWQKEIVREKVGLIDANQDCPDTLIVLQHHPVYTMGTNSTEEYFNFDLKDSPFPIYRTERGGEVTYHGPGQLVMYPIVNLRNHKMDLHWYLRALEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSKWITFHGLALNVTTDLTPFNWIVPCGIRNRKVGNIKELLREVDLHTGFQKDSQLIDITFGALIQEFSEVFQLDMYHKTIPSLEFLKQIPNNSPGEISYNL Homology
BLAST of IVF0024405.1 vs. ExPASy Swiss-Prot
Match: Q948J9 (Octanoyltransferase LIP2p, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP2P PE=1 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 4.7e-102 Identity = 172/234 (73.50%), Postives = 196/234 (83.76%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy Swiss-Prot
Match: P0C7R2 (Octanoyltransferase LIP2p2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP2P2 PE=1 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98 Identity = 166/237 (70.04%), Postives = 196/237 (82.70%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy Swiss-Prot
Match: Q8YSA4 (Octanoyltransferase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=lipB PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 3.1e-53 Identity = 105/233 (45.06%), Postives = 147/233 (63.09%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy Swiss-Prot
Match: Q3M698 (Octanoyltransferase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=lipB PE=3 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 4.0e-53 Identity = 105/231 (45.45%), Postives = 145/231 (62.77%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy Swiss-Prot
Match: Q31KN6 (Octanoyltransferase OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=lipB PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.4e-52 Identity = 100/224 (44.64%), Postives = 142/224 (63.39%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy TrEMBL
Match: A0A5D3CD13 (Lipoyl(octanoyl) transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001740 PE=3 SV=1) HSP 1 Score: 650.2 bits (1676), Expect = 4.3e-183 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy TrEMBL
Match: A0A1S4DWA5 (Lipoyl(octanoyl) transferase OS=Cucumis melo OX=3656 GN=LOC103489357 PE=3 SV=1) HSP 1 Score: 650.2 bits (1676), Expect = 4.3e-183 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy TrEMBL
Match: A0A0A0KRC7 (Lipoyl(octanoyl) transferase OS=Cucumis sativus OX=3659 GN=Csa_5G612870 PE=3 SV=1) HSP 1 Score: 594.7 bits (1532), Expect = 2.1e-166 Identity = 282/300 (94.00%), Postives = 287/300 (95.67%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy TrEMBL
Match: A0A6J1G154 (Lipoyl(octanoyl) transferase OS=Cucurbita moschata OX=3662 GN=LOC111449727 PE=3 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.2e-134 Identity = 233/306 (76.14%), Postives = 262/306 (85.62%), Query Frame = 0
BLAST of IVF0024405.1 vs. ExPASy TrEMBL
Match: A0A6J1D9U7 (Lipoyl(octanoyl) transferase OS=Momordica charantia OX=3673 GN=LOC111018691 PE=3 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 2.8e-134 Identity = 234/305 (76.72%), Postives = 262/305 (85.90%), Query Frame = 0
BLAST of IVF0024405.1 vs. NCBI nr
Match: XP_016900264.1 (PREDICTED: plastidial lipoyltransferase 2-like [Cucumis melo]) HSP 1 Score: 645 bits (1664), Expect = 5.41e-234 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of IVF0024405.1 vs. NCBI nr
Match: KAA0034631.1 (plastidial lipoyltransferase 2-like [Cucumis melo var. makuwa] >TYK09182.1 plastidial lipoyltransferase 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 645 bits (1664), Expect = 6.20e-231 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of IVF0024405.1 vs. NCBI nr
Match: XP_031742006.1 (octanoyltransferase LIP2p, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 593 bits (1528), Expect = 2.73e-213 Identity = 283/301 (94.02%), Postives = 288/301 (95.68%), Query Frame = 0
BLAST of IVF0024405.1 vs. NCBI nr
Match: XP_031742007.1 (octanoyltransferase LIP2p, chloroplastic isoform X3 [Cucumis sativus]) HSP 1 Score: 590 bits (1521), Expect = 2.85e-212 Identity = 282/300 (94.00%), Postives = 287/300 (95.67%), Query Frame = 0
BLAST of IVF0024405.1 vs. NCBI nr
Match: XP_004135053.2 (octanoyltransferase LIP2p, chloroplastic isoform X1 [Cucumis sativus] >KGN52158.1 hypothetical protein Csa_008925 [Cucumis sativus]) HSP 1 Score: 590 bits (1522), Expect = 4.06e-212 Identity = 282/301 (93.69%), Postives = 287/301 (95.35%), Query Frame = 0
BLAST of IVF0024405.1 vs. TAIR 10
Match: AT4G31050.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 372.5 bits (955), Expect = 3.3e-103 Identity = 172/234 (73.50%), Postives = 196/234 (83.76%), Query Frame = 0
BLAST of IVF0024405.1 vs. TAIR 10
Match: AT1G47578.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 361.3 bits (926), Expect = 7.7e-100 Identity = 166/237 (70.04%), Postives = 196/237 (82.70%), Query Frame = 0
BLAST of IVF0024405.1 vs. TAIR 10
Match: AT1G04640.1 (lipoyltransferase 2 ) HSP 1 Score: 129.0 bits (323), Expect = 6.4e-30 Identity = 71/201 (35.32%), Postives = 114/201 (56.72%), Query Frame = 0
BLAST of IVF0024405.1 vs. TAIR 10
Match: AT1G04640.2 (lipoyltransferase 2 ) HSP 1 Score: 129.0 bits (323), Expect = 6.4e-30 Identity = 71/201 (35.32%), Postives = 114/201 (56.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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