IVF0023906.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0023906.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NDR1/HIN1-like protein 10
Location	chr04: 29457411 .. 29457989 (+)
Sequence length	579
RNA-Seq Expression	IVF0023906.2
Synteny	IVF0023906.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGTACTTCTTTATGGTGTTTTCTAATATCCATCATTGTTGTGATCGCAATATCCTTTGGGGGCTCTATATTGATCTTATGGCTTATTTTCATAACCAACAAAATCAAATTCAATGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTCTTCTTCACCATTAGAAACCCTAATAAGCAAGTTGGAATCTACTATGACACCATTGATGCAACTGCAATGTATAAAGGTCAAAACTTCGACACCAGACTGCTAACCCCTTTTTACCAAGGCTCGAGCACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCGAATTTCGTCTATCGTTGAGATTGAAATTTGGGCTTTTTAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTGAATTCTAGTGGAGCTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

mRNA sequence

ATGGGAAGTACTTCTTTATGGTGTTTTCTAATATCCATCATTGTTGTGATCGCAATATCCTTTGGGGGCTCTATATTGATCTTATGGCTTATTTTCATAACCAACAAAATCAAATTCAATGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTCTTCTTCACCATTAGAAACCCTAATAAGCAAGTTGGAATCTACTATGACACCATTGATGCAACTGCAATGTATAAAGGTCAAAACTTCGACACCAGACTGCTAACCCCTTTTTACCAAGGCTCGAGCACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCGAATTTCGTCTATCGTTGAGATTGAAATTTGGGCTTTTTAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTGAATTCTAGTGGAGCTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

Coding sequence (CDS)

ATGGGAAGTACTTCTTTATGGTGTTTTCTAATATCCATCATTGTTGTGATCGCAATATCCTTTGGGGGCTCTATATTGATCTTATGGCTTATTTTCATAACCAACAAAATCAAATTCAATGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTCTTCTTCACCATTAGAAACCCTAATAAGCAAGTTGGAATCTACTATGACACCATTGATGCAACTGCAATGTATAAAGGTCAAAACTTCGACACCAGACTGCTAACCCCTTTTTACCAAGGCTCGAGCACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCGAATTTCGTCTATCGTTGAGATTGAAATTTGGGCTTTTTAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTGAATTCTAGTGGAGCTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

Protein sequence

MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQNAIGCDVDY

Homology

[Close]

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-36
Identity = 84/193 (43.52%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 8   CFLISIIVVIAIS----FGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLG 67
           C L+S+ V + IS     G + LI WLI     IKF+VTDA+LT+F+ T+ D  L YNL 
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 68  VFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVI 127
           +   +RNPNK++G+YYD I+A A Y+G+ F T  LTPFYQG   T++L   F+GQ +V+ 
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIF 154

Query: 128 PNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGC-GFQVPLNSSGASSF 187
                  L +E++SGVY+I+++FRL +R K G  KF R++PKV C   ++PL++S  ++ 
Sbjct: 155 NAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

Query: 188 QNA---IGCDVDY 193
            +    I CD D+
Sbjct: 215 TSTVFPIKCDFDF 227

[Close]

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-32
Identity = 79/187 (42.25%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 10  LISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNF--TNNDTQLHYNLGVFFT 69
           + +I++ IA+  G + LI+WLIF  N IKF+VTDA LT+F    TNN   L YNL + FT
Sbjct: 48  IFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNFT 107

Query: 70  IRNPNKQVGIYYDTIDATAMYKGQNFD-TRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNN 129
           IRNPN+++G+YYD I+    Y  Q F  +  ++ FYQG   T+++  +  GQQ+V++   
Sbjct: 108 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 167

Query: 130 TVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQ-NA 189
              +L  +  S +Y ID + RL +R KFGL K  R +PK+ C  +VPL S+  S F    
Sbjct: 168 ERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQP 227

Query: 190 IGCDVDY 193
             CDVD+
Sbjct: 228 TKCDVDF 231

[Close]

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.2e-32
Identity = 75/186 (40.32%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 10  LISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIR 69
           + +I++ +A+  G + LILWLIF  N +KF V DA L +F+F  N+  LHY+L + FTIR
Sbjct: 55  ICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTIR 114

Query: 70  NPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVS 129
           NPN++VG+YYD    +  Y  Q F +  ++ FYQG   T+++  + EGQ +VV+ +   +
Sbjct: 115 NPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGART 174

Query: 130 ELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGC-GFQVPL---NSSGASSFQNA 189
           +LK ++ SG+Y I+ + RLS+R KF   K  +++PK+ C   ++PL   NS+G   FQ  
Sbjct: 175 DLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQ-P 234

Query: 190 IGCDVD 192
           + CD D
Sbjct: 235 VQCDFD 238

[Close]

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 34  TNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNF 93
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    +GI+YD  +AT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 94  DTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLK 153
               +  FY GS  T LL+  FEGQ +V++  N   + + ++ +GVY IDV+  ++ R+ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 154 FGLFKFIRVRPKVGCGFQVPL-----NSSGASSFQNAIG 188
                   ++P V C  ++PL     NS+G       IG
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNSTGGHKKMLLIG 161

[Close]

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 12  SIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQ-LHYNLGVFFTIRN 71
           SII V+ I F  +IL++W I   +K +F + DAT+  FN + N    L  N  +  + RN
Sbjct: 21  SIIFVLFIIF-LTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRN 80

Query: 72  PNKQVGIYYDTIDATAMYKGQ--NFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTV 131
           PN ++GIYYD +D  A Y+ Q   F T  + P YQG     +      G  V + P N V
Sbjct: 81  PNNKIGIYYDRLDVYATYRSQQITFPTS-IPPTYQGHKDVDIWSPFVYGTSVPIAPFNGV 140

Query: 132 SELKSEKLSGVYSIDVEFRLSLRLKFGLF 158
           S L ++K +GV  + +     +R K G F
Sbjct: 141 S-LDTDKDNGVVLLIIRADGRVRWKVGTF 166

[Close]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL
Match: A0A5A7TR00 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001580 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60
           MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY
Sbjct: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60

Query: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120
           NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV
Sbjct: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120

Query: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180
           VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS
Sbjct: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180

Query: 181 SFQNAIGCDVDY 193
           SFQNAIGCDVDY
Sbjct: 181 SFQNAIGCDVDY 192

[Close]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL
Match: A0A1S3B970 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60
           MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY
Sbjct: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60

Query: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120
           NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV
Sbjct: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120

Query: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180
           VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS
Sbjct: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180

Query: 181 SFQNAIGCDVDY 193
           SFQNAIGCDVDY
Sbjct: 181 SFQNAIGCDVDY 192

[Close]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL
Match: A0A0A0LEQ7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 183

Query: 185 AIGCDVDY 193
           AIGCDVDY
Sbjct: 184 AIGCDVDY 191

[Close]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL
Match: A0A0A0LGS2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78
Identity = 151/195 (77.44%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60
           M   SLWC LIS+IV   +SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL Y
Sbjct: 21  MSMASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQY 80

Query: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120
           NLG++FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ 
Sbjct: 81  NLGIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRA 140

Query: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180
           VVI NN VSEL SEKL+GVYSIDV+FRLSLRLKFG++K IRVRPKV CGFQVPLN +G S
Sbjct: 141 VVIGNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTS 200

Query: 181 S---FQNAIGCDVDY 193
           S   FQ+AIGC VDY
Sbjct: 201 SFPWFQDAIGCHVDY 215

[Close]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL
Match: A0A1S3B955 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 150/191 (78.53%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           SLWC LIS+IV    SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL YNLG+
Sbjct: 3   SLWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 62

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           +FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ VVI 
Sbjct: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 122

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASS--- 184
           NN VSELKSEKL+GVYS+DV+FRLSLRLKFG++K +RVRPKV C FQVPLNSSG SS   
Sbjct: 123 NNKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSFPW 182

Query: 185 FQNAIGCDVDY 193
           FQ AIGC VDY
Sbjct: 183 FQEAIGCHVDY 193

[Close]

BLAST of IVF0023906.2 vs. NCBI nr
Match: XP_008443592.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 377 bits (967), Expect = 1.40e-131
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60
           MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY
Sbjct: 1   MGSTSLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHY 60

Query: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120
           NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV
Sbjct: 61  NLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQV 120

Query: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180
           VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS
Sbjct: 121 VVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGAS 180

Query: 181 SFQNAIGCDVDY 192
           SFQNAIGCDVDY
Sbjct: 181 SFQNAIGCDVDY 192

[Close]

BLAST of IVF0023906.2 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus])

HSP 1 Score: 338 bits (866), Expect = 4.24e-113
Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 214 SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 273

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 274 FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 333

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 334 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 393

Query: 185 AIGCDVDY 192
           AIGCDVDY
Sbjct: 394 AIGCDVDY 401

[Close]

BLAST of IVF0023906.2 vs. NCBI nr
Match: KAE8651105.1 (hypothetical protein Csa_001204 [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 1.78e-107
Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 183

Query: 185 AI 186
           AI
Sbjct: 184 AI 185

[Close]

BLAST of IVF0023906.2 vs. NCBI nr
Match: XP_038904447.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 300 bits (768), Expect = 3.12e-101
Identity = 151/191 (79.06%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           SLWC L+ +I+   +SFG S+LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQLHYNLGV
Sbjct: 3   SLWCLLMCVIIGFGVSFGFSVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLHYNLGV 62

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           +FTIRNPN+QVGIYYDTI+AT  YK QNF TRLLTPFYQ   TTSLLKGRFEGQQ+VVI 
Sbjct: 63  YFTIRNPNEQVGIYYDTIEATTSYKDQNFHTRLLTPFYQTPKTTSLLKGRFEGQQLVVIA 122

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSF-- 184
           NN VSE  +EKL+GVYSIDV+FRLSLRLKFGL+K IRVRPKVGCGFQ+PLNSSG SSF  
Sbjct: 123 NNKVSEFNTEKLAGVYSIDVKFRLSLRLKFGLYKIIRVRPKVGCGFQLPLNSSGTSSFPW 182

Query: 185 -QNAIGCDVDY 192
            Q AIGC VDY
Sbjct: 183 FQTAIGCHVDY 193

[Close]

BLAST of IVF0023906.2 vs. NCBI nr
Match: XP_004136708.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 298 bits (764), Expect = 1.27e-100
Identity = 150/191 (78.53%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64
           SLWC LIS+IV   +SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL YNLG+
Sbjct: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 62

Query: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124
           +FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ VVI 
Sbjct: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 122

Query: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSF-- 184
           NN VSEL SEKL+GVYSIDV+FRLSLRLKFG++K IRVRPKV CGFQVPLN +G SSF  
Sbjct: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182

Query: 185 -QNAIGCDVDY 192
            Q+AIGC VDY
Sbjct: 183 FQDAIGCHVDY 193

[Close]

BLAST of IVF0023906.2 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 84/193 (43.52%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 8   CFLISIIVVIAIS----FGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLG 67
           C L+S+ V + IS     G + LI WLI     IKF+VTDA+LT+F+ T+ D  L YNL 
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 68  VFFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVI 127
           +   +RNPNK++G+YYD I+A A Y+G+ F T  LTPFYQG   T++L   F+GQ +V+ 
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIF 154

Query: 128 PNNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGC-GFQVPLNSSGASSF 187
                  L +E++SGVY+I+++FRL +R K G  KF R++PKV C   ++PL++S  ++ 
Sbjct: 155 NAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 214

Query: 188 QNA---IGCDVDY 193
            +    I CD D+
Sbjct: 215 TSTVFPIKCDFDF 227

[Close]

BLAST of IVF0023906.2 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 79/187 (42.25%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 10  LISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNF--TNNDTQLHYNLGVFFT 69
           + +I++ IA+  G + LI+WLIF  N IKF+VTDA LT+F    TNN   L YNL + FT
Sbjct: 48  IFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNFT 107

Query: 70  IRNPNKQVGIYYDTIDATAMYKGQNFD-TRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNN 129
           IRNPN+++G+YYD I+    Y  Q F  +  ++ FYQG   T+++  +  GQQ+V++   
Sbjct: 108 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 167

Query: 130 TVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQ-NA 189
              +L  +  S +Y ID + RL +R KFGL K  R +PK+ C  +VPL S+  S F    
Sbjct: 168 ERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQP 227

Query: 190 IGCDVDY 193
             CDVD+
Sbjct: 228 TKCDVDF 231

[Close]

BLAST of IVF0023906.2 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-33
Identity = 75/186 (40.32%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 10  LISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIR 69
           + +I++ +A+  G + LILWLIF  N +KF V DA L +F+F  N+  LHY+L + FTIR
Sbjct: 55  ICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTIR 114

Query: 70  NPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVS 129
           NPN++VG+YYD    +  Y  Q F +  ++ FYQG   T+++  + EGQ +VV+ +   +
Sbjct: 115 NPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGART 174

Query: 130 ELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGC-GFQVPL---NSSGASSFQNA 189
           +LK ++ SG+Y I+ + RLS+R KF   K  +++PK+ C   ++PL   NS+G   FQ  
Sbjct: 175 DLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQ-P 234

Query: 190 IGCDVD 192
           + CD D
Sbjct: 235 VQCDFD 238

[Close]

BLAST of IVF0023906.2 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 10  LISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIR 69
           + +I++ + +  G   LILW I   N +KF VT+A LT+F F      LHYN+ + F+IR
Sbjct: 54  ICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIR 113

Query: 70  NPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVS 129
           NPN+++GI+YD ++    Y  Q F    +T FYQG   T+++     GQ++V++      
Sbjct: 114 NPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRR 173

Query: 130 ELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASS-FQ-NAIG 189
           + + ++ SGVY IDV+ R  LR KFG      VRPK+ C  +VPL++S +   FQ +   
Sbjct: 174 DFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPTK 233

Query: 190 CDVD 192
           C VD
Sbjct: 234 CHVD 237

[Close]

BLAST of IVF0023906.2 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 34  TNKIKFNVTDATLTQFNFTNNDTQLHYNLGVFFTIRNPNKQVGIYYDTIDATAMYKGQNF 93
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    +GI+YD  +AT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 94  DTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPNNTVSELKSEKLSGVYSIDVEFRLSLRLK 153
               +  FY GS  T LL+  FEGQ +V++  N   + + ++ +GVY IDV+  ++ R+ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 154 FGLFKFIRVRPKVGCGFQVPL-----NSSGASSFQNAIG 188
                   ++P V C  ++PL     NS+G       IG
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNSTGGHKKMLLIG 161

The following BLAST results are available for this feature:

BLAST of IVF0023906.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	1.6e-36	43.52	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	1.9e-32	42.25	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	4.2e-32	40.32	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	2.0e-18	33.96	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q9SRN0	1.0e-09	35.57	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]

BLAST of IVF0023906.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TR00	2.6e-101	100.00	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00...	[more]
A0A1S3B970	2.6e-101	100.00	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1	[more]
A0A0A0LEQ7	1.7e-89	88.83	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 ...	[more]
A0A0A0LGS2	3.1e-78	77.44	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 ...	[more]
A0A1S3B955	1.5e-77	78.53	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1	[more]

BLAST of IVF0023906.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443592.1	1.40e-131	100.00	PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cuc...	[more]
XP_004136710.2	4.24e-113	88.83	uncharacterized protein LOC101218041 [Cucumis sativus]	[more]
KAE8651105.1	1.78e-107	88.46	hypothetical protein Csa_001204 [Cucumis sativus]	[more]
XP_038904447.1	3.12e-101	79.06	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_004136708.1	1.27e-100	78.53	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]

BLAST of IVF0023906.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	1.2e-37	43.52	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	1.3e-33	42.25	NDR1/HIN1-like 3	[more]
AT3G11650.1	3.0e-33	40.32	NDR1/HIN1-like 2	[more]
AT2G35460.1	1.4e-30	38.04	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	1.4e-19	33.96	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 66..167 e-value: 7.4E-13 score: 48.9
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 3..188
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 3..188

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0023906	IVF0023906	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0023906.2-exon	IVF0023906.2-exon-chr04:29457411..29457989	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0023906.2-cds	IVF0023906.2-cds-chr04:29457411..29457989	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0023906.2	IVF0023906.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane