IVF0020335.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0020335.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	S-protein homolog
Location	chr04: 4338306 .. 4338743 (-)
Sequence length	438
RNA-Seq Expression	IVF0020335.2
Synteny	IVF0020335.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTCATGTAACCTACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCCTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA

mRNA sequence

ATGGGTTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTCATGTAACCTACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCCTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA

Coding sequence (CDS)

ATGGGTTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTCATGTAACCTACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCCTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA

Protein sequence

MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYSMCLQDPKNPGKDICYNYGDKEPSIV

Homology

[Close]

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.3e-21
Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 33  TVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92
           TVV +  +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 93  QIYWFNIFDDKRDAGKCTTCRWIIHEYSMC 123
           +   F+I+D +RD G C  C+W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.7e-20
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 32  TTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 91
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 92  QHQIYWFNIFDDKRDAGK----CTTCRWIIHEYSMCLQDPKNPGKDICYNYGDKEPS 144
           Q +  WFNI+DD RD  +    C  C W I +Y  C     +   +ICY++     S
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 32  TTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 91
           T V + N I     +T+ C+SK+DDLG H+L  GQ + +KFRP+   TTLF C F W   
Sbjct: 31  TVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCKFLW--N 90

Query: 92  HQIYWFNIFDDKRDAGKCTTCRWIIHEYSMCLQDPKNPGKDICY 136
           + + WF+ +   RD G C +C W I+  S C+    N   D CY
Sbjct: 91  NNVKWFDTYRSDRDQGHCYSCNWSINADSACISGNFNKKFDRCY 132

[Close]

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 34  VVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 93
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNIFDDKRDAGK----CTTCRWIIHEYSMCLQDPKNPGKDICYNY 138
              F+I+DD RD  +    C  C W I     C+    +   +ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 25  SIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFC 84
           S+F     TV I N +   + +  HCKSK+DDLG   L  G+ +SF F     G TL+FC
Sbjct: 41  SVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFC 100

Query: 85  SFTWTGQHQIYWFNIFDDKRDAG---KCTT--CRWIIHEYSMCLQDPKNPGKDICY 136
           SF+W   ++ + F+I+ D RD+G   KC +  C W I     C  + +    D+CY
Sbjct: 101 SFSW--PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCY 154

[Close]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.5e-82
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 146
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL
Match: A0A5A7UYG6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001800 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.6e-82
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCN+RAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 146
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFF CN+RAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 146
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.2e-81
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLI FSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSI 145
           MCLQDPKNPGKDICYNYGDKEPSI
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSI 144

[Close]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL
Match: A0A5A7UX92 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001810 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-81
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVH KSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHWKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 146
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 2.35e-107
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. NCBI nr
Match: KAA0059246.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (796), Expect = 4.73e-107
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCN+RAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (790), Expect = 3.90e-106
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFF CN+RAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. NCBI nr
Match: KAA0059247.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (787), Expect = 1.12e-105
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVH KSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHWKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145
           MCLQDPKNPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. NCBI nr
Match: TYK14097.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (786), Expect = 1.59e-105
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSSPTLALSLLIFF CNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145
           MCLQDP NPGKDICYNYGDKEPSIV
Sbjct: 121 MCLQDPTNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of IVF0020335.2 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.7 bits (252), Expect = 5.2e-22
Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 33  TVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92
           TVV +  +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 93  QIYWFNIFDDKRDAGKCTTCRWIIHEYSMC 123
           +   F+I+D +RD G C  C+W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of IVF0020335.2 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 32  TTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 91
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 92  QHQIYWFNIFDDKRDAGK----CTTCRWIIHEYSMCLQDPKNPGKDICYNYGDKEPS 144
           Q +  WFNI+DD RD  +    C  C W I +Y  C     +   +ICY++     S
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of IVF0020335.2 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 34  VVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 93
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNIFDDKRDAGK----CTTCRWIIHEYSMCLQDPKNPGKDICYNY 138
              F+I+DD RD  +    C  C W I     C+    +   +ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of IVF0020335.2 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.9 bits (224), Expect = 9.1e-19
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0


Query: 27  FIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSF 86
           F  P TTVVI N +   +P+  HCKSKNDDLG   + +   +SF+FRP++ G TLFFC F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 87  TWTGQHQIYWFNIFDDKRDAG----KCTTCRWIIHEYSMCLQDPKNPGKDIC 135
            W    +++WF+I+   RD       C  C W I +   C  +  +   D+C
Sbjct: 83  IW--DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVC 132

[Close]

BLAST of IVF0020335.2 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-17
Identity = 50/141 (35.46%), Postives = 71/141 (50.35%), Query Frame = 0


Query: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGS  T     L+FF   +     +I  +  T+VVI N +  G+P+  HCKS+ DDLG  
Sbjct: 1   MGSLET----CLLFFV--MVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQ 60

Query: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAG----KCTTCRWII 120
            L  G+ +SF F P++ G TLF+C F+W  +  I  F+I+   RD       C  C W I
Sbjct: 61  SLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKI 120

Query: 121 HEYSMCLQDPKNPGKDICYNY 138
            +   C    K    D CY++
Sbjct: 121 RKNGPCKFYKKTGMFDHCYSW 133

The following BLAST results are available for this feature:

BLAST of IVF0020335.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	7.3e-21	51.11	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	4.7e-20	41.88	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	3.4e-18	40.38	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FMQ4	3.4e-18	40.74	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	5.1e-14	37.07	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of IVF0020335.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQ97	1.5e-82	100.00	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7UYG6	2.6e-82	99.31	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00...	[more]
A0A5D3CTD8	1.3e-81	98.62	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7TWM4	2.2e-81	99.31	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7UX92	2.9e-81	99.31	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00...	[more]

BLAST of IVF0020335.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063208.1	2.35e-107	100.00	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]
KAA0059246.1	4.73e-107	99.31	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
TYK13716.1	3.90e-106	98.62	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0059247.1	1.12e-105	99.31	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
TYK14097.1	1.59e-105	98.62	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0020335.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	5.2e-22	51.11	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	3.4e-21	41.88	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	2.4e-19	40.74	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	9.1e-19	39.29	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	8.6e-17	35.46	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..136 e-value: 1.1E-28 score: 99.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 8..128
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 8..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0020335	IVF0020335	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020335.2-exon	IVF0020335.2-exon-chr04:4338306..4338743	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020335.2-cds	IVF0020335.2-cds-chr04:4338306..4338743	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0020335.2	IVF0020335.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen