IVF0020274.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0020274.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	auxin-responsive protein SAUR50-like
Location	chr01: 15626638 .. 15627231 (+)
Sequence length	594
RNA-Seq Expression	IVF0020274.1
Synteny	IVF0020274.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCGAAAAACTTCACCCAAAATGGCCATTCCCAAACCCACCTCCCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACGTCCACTCCCCCGGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTCTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCCATCTCGCTCTTGACTCACCCCGATTTCCAATGCCTTCTGCGCCTTGCGGAGGAGGAATTCGGGTTTCGCCACCATATGGGTCTTACTATTCCCTGCGAAGAGGTGGTTTTCCGGTCCCTCACCGCCGCCCTCAAATGAACCCACCGCCGCCCAAATTGCACACATTCCTCTTCATTTTTTCTTTTTAATTTTAATTTTAATTGTAATTTTAGTATTATTATTGTTTTTTTACCCTTTTTGGAGGGGTTTTTTTTTTCTTTTTTTTCTTTTTAAAATTTTTTGGGTGGTATGATAACTTCTTTTGACTTGATGAACCAAACTCCATACTCCAAAGGAAAAGAGTAAAATGGGGTTTGTGTATTATTGTTGTATAAATATTTACTAGTGGCATGGCATGGCATGGCATCATG

mRNA sequence

GACCCGAAAAACTTCACCCAAAATGGCCATTCCCAAACCCACCTCCCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACGTCCACTCCCCCGGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTCTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCCATCTCGCTCTTGACTCACCCCGATTTCCAATGCCTTCTGCGCCTTGCGGAGGAGGAATTCGGGTTTCGCCACCATATGGGTCTTACTATTCCCTGCGAAGAGGTGGTTTTCCGGTCCCTCACCGCCGCCCTCAAATGAACCCACCGCCGCCCAAATTGCACACATTCCTCTTCATTTTTTCTTTTTAATTTTAATTTTAATTGTAATTTTAGTATTATTATTGTTTTTTTACCCTTTTTGGAGGGGTTTTTTTTTTCTTTTTTTTCTTTTTAAAATTTTTTGGGTGGTATGATAACTTCTTTTGACTTGATGAACCAAACTCCATACTCCAAAGGAAAAGAGTAAAATGGGGTTTGTGTATTATTGTTGTATAAATATTTACTAGTGGCATGGCATGGCATGGCATCATG

Coding sequence (CDS)

ATGGCCATTCCCAAACCCACCTCCCTCAAGCAAATCGTCAAGCGCTGCTCCAGTCTAGGCCGAAAACAAGATCCCACGTCCACTCCCCCGGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTCTATGTCGGCCAAAATCGGAGCCGATATGTCGTCCCCATCTCGCTCTTGACTCACCCCGATTTCCAATGCCTTCTGCGCCTTGCGGAGGAGGAATTCGGGTTTCGCCACCATATGGGTCTTACTATTCCCTGCGAAGAGGTGGTTTTCCGGTCCCTCACCGCCGCCCTCAAATGA

Protein sequence

MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK

Homology

[Close]

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-28
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MAIPKPTS-------LKQIVKRCSSLGRKQ----DPTSTPPAYDGVPKGHFAVYVGQNRS 60
           MAI K TS       LKQI+KRCSSLG+K     D    P     VPKGHF VYVG+NRS
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPL---DVPKGHFPVYVGENRS 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           RY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 61  RYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-25
Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 8   SLKQIVKRCSSLGRKQDP-----TSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPD 67
           S+KQIVKRCSSL + ++               VPKGHF VYVG NRSRY+VPIS L H +
Sbjct: 16  SIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLHHSE 75

Query: 68  FQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +  +
Sbjct: 76  FQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 8  SLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLL 67
          ++K+I+K+CSS G+  D +  P   + VPKGHF VYVG+ R+RY+VPIS L HP FQ LL
Sbjct: 15 AIKKIIKKCSSFGKNNDDSGLP---NDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLL 74

Query: 68 RLAEEEFGFRHHMGLTIPCEEVVFRS 94
          + +EEEFGF H MG+ IPC+EV F S
Sbjct: 75 QRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-14
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 36 PKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFRHHM-GLTIPCEEVVFRSL 95
          PKG+ AVYVG+   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +
Sbjct: 18 PKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCI 77

Query: 96 TAAL 99
          T+ L
Sbjct: 78 TSCL 81

[Close]

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 36 PKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFRHHM-GLTIPCEEVVFRSL 95
          PKG+ AVYVG+   R+V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +
Sbjct: 18 PKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77

Query: 96 TAAL 99
          T  L
Sbjct: 78 TCCL 81

[Close]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL
Match: A0A1S3BJD0 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.2e-51
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.1e-50
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           MAIPKPT+LKQIVKRCSSLGRKQDPT+TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           M IPKP +LK IVKRCSSLGRKQD T+T  AYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.3e-44
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
           M IPKP +LK IVKRCSSLGRKQD  +T  AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTH 60

Query: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL
Match: A0A6J1JNJ6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.6e-38
Identity = 85/106 (80.19%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MAIPKP----TSLKQIVKRCSSLGRKQDPTSTPPA---YDGVPKGHFAVYVGQNRSRYVV 60
           MAI KP     +LKQIVKRCSSLGRKQ+      A   +D VPKGHFAVYVG+NRSRYVV
Sbjct: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAVAATATAGFDDVPKGHFAVYVGENRSRYVV 60

Query: 61  PISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           PISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 106

[Close]

BLAST of IVF0020274.1 vs. NCBI nr
Match: XP_008448019.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo])

HSP 1 Score: 209 bits (531), Expect = 4.13e-68
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
          MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1  MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99
          PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. NCBI nr
Match: XP_004144828.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 206 bits (525), Expect = 3.40e-67
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
          MAIPKPT+LKQIVKRCSSLGRKQDPT+TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1  MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99
          PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. NCBI nr
Match: XP_022969389.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 189 bits (481), Expect = 1.76e-60
Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 1  MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
          M IPKP +LK IVKRCSSLGRKQD T+T  AYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1  MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99
          PDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of IVF0020274.1 vs. NCBI nr
Match: XP_038887253.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 189 bits (479), Expect = 3.67e-60
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTP-PAYDGVPKGHFAVYVGQNRSRYVVPISLLT 60
           MAIPKP +LKQIVKRCSSLGRKQD T+   PAYDGVPKGHFAVYVG+NRSRYVVPISLLT
Sbjct: 1   MAIPKPATLKQIVKRCSSLGRKQDATAAAAPAYDGVPKGHFAVYVGENRSRYVVPISLLT 60

Query: 61  HPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99
           HPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 100

[Close]

BLAST of IVF0020274.1 vs. NCBI nr
Match: KAE8645655.1 (hypothetical protein Csa_020544 [Cucumis sativus])

HSP 1 Score: 187 bits (474), Expect = 1.66e-59
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60
          MAIPKPT+LKQIVKRCSSLGRKQDPT+TPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH
Sbjct: 1  MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEE 88
          PDFQCLLRLAEEEFGFRHHMGLTIPCEE
Sbjct: 61 PDFQCLLRLAEEEFGFRHHMGLTIPCEE 88

[Close]

BLAST of IVF0020274.1 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-30
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 2   AIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHP 61
           A+ +  SLKQI+KRCSSLG+K         ++ VPKGHF VYVGQ+RSRYVVPIS L H 
Sbjct: 10  ALSQAASLKQILKRCSSLGKKNQGNC---YFNDVPKGHFPVYVGQHRSRYVVPISWLDHH 69

Query: 62  DFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Sbjct: 70  EFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLISMFR 104

[Close]

BLAST of IVF0020274.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-30
Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 9   LKQIVKRCSSLGRKQ------DPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPD 68
           +KQI+KRCSSLG+KQ      D   +P     VPKGHF VYVG+NR RYVVPIS LT P+
Sbjct: 15  IKQILKRCSSLGKKQSNVYGEDENGSPL---NVPKGHFVVYVGENRVRYVVPISFLTRPE 74

Query: 69  FQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+ L+
Sbjct: 75  FQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of IVF0020274.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 7.9e-30
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MAIPKPTS-------LKQIVKRCSSLGRKQ----DPTSTPPAYDGVPKGHFAVYVGQNRS 60
           MAI K TS       LKQI+KRCSSLG+K     D    P     VPKGHF VYVG+NRS
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPL---DVPKGHFPVYVGENRS 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 100
           RY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 61  RYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of IVF0020274.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-29
Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 9   LKQIVKRCSSLGRKQ--DPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCL 68
           LKQI+KRCSSL + Q  D    P     VPKGHF VYVG+ RSRY+VPIS LTHP F+ L
Sbjct: 15  LKQILKRCSSLAKNQCYDEDGLPV---DVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSL 74

Query: 69  LRLAEEEFGFRHHMGLTIPCEEVVFRSLTAAL 99
           L+ AEEEFGF H MGLTIPCEEVVFRSLT+ +
Sbjct: 75  LQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of IVF0020274.1 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 9   LKQIVKRCSSLGRKQ--DPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTHPDFQCL 68
           LKQI+KRCSSLG+KQ  D    P     VPKGHF VYVG+ R+RY+VPIS LTHP+F  L
Sbjct: 15  LKQILKRCSSLGKKQCYDEEGLPL---DVPKGHFPVYVGEKRTRYIVPISFLTHPEFLIL 74

Query: 69  LRLAEEEFGFRHHM-GLTIPCEEVVFRSLTAALK 100
           L+ AEEEFGFRH M GLTIPCEEVVF SLT+ ++
Sbjct: 75  LQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

The following BLAST results are available for this feature:

BLAST of IVF0020274.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.1e-28	60.91	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.5e-25	60.82	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	1.4e-23	56.98	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	2.0e-14	57.81	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	2.6e-14	56.25	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of IVF0020274.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJD0	8.2e-51	100.00	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1	[more]
A0A0A0K5S8	4.1e-50	97.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1	[more]
A0A6J1I2G2	5.1e-45	90.91	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411...	[more]
A0A6J1GME7	4.3e-44	88.89	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1JNJ6	3.6e-38	80.19	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307...	[more]

BLAST of IVF0020274.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448019.1	4.13e-68	100.00	PREDICTED: auxin-induced protein 15A [Cucumis melo]	[more]
XP_004144828.1	3.40e-67	97.98	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
XP_022969389.1	1.76e-60	90.91	auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-re...	[more]
XP_038887253.1	3.67e-60	91.00	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
KAE8645655.1	1.66e-59	97.73	hypothetical protein Csa_020544 [Cucumis sativus]	[more]

BLAST of IVF0020274.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36110.1	2.1e-30	64.29	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	2.7e-30	67.01	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	7.9e-30	60.91	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	6.6e-29	67.39	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.9e-28	67.02	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 10..97 e-value: 3.6E-27 score: 94.4
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 3..98
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 3..98

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0020274	IVF0020274	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020274.1-five_prime_utr	IVF0020274.1-five_prime_utr-chr01:15626638..15626659	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020274.1-exon	IVF0020274.1-exon-chr01:15626638..15627231	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020274.1-cds	IVF0020274.1-cds-chr01:15626660..15626959	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0020274.1-three_prime_utr	IVF0020274.1-three_prime_utr-chr01:15626960..15627231	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0020274.1	IVF0020274.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin