IVF0017433.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0017433.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Dirigent protein
Location	chr05: 536932 .. 537743 (+)
Sequence length	812
RNA-Seq Expression	IVF0017433.2
Synteny	IVF0017433.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGTCTGAAGTCCTAAAAAGAGAGCAACTTCCAAATCTCCCATTCCATGGCCGGAATCTCTCCAATCTCCACCACCCATTTCCTCTTTCTCTCTTTCCTCCTATTCTCCGCCGTAGCTTTGGCTATAGCCGAAGATGAAAATTCCTTTGCAAGAACAGTGAAGAGAAAACGGTTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTCTCTACTGGCATGACGTTCTAAGTGGAAAAGACCCAACTTCAATCCAAATCGTTCCCCCTGTTTCGAACACTTCAATGACAAGATTCGGTGCGGTCCAAATGATAGACAACCCATTGACAGAAACTCCAGATCCCAAGTCGAAACTATGGGGAAGAGCAGAGGGATTGTACGCATCGGCTTCACAAGAGGGATCAGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAGTACAATGGAAGCTCCATCACAGTATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGTTGTTCAGATTTGCAAGAGGGTATGCGAAAGCTTCAACCGTTAATATTGATTTCACAACAGGGGATGCTGTCATTGAATATAACATTTACGTACTTCATTATTGAATTCTGCTTTTTCTTTATTTCCTTTCTTCAGTTATTCTAAAAACAAATTATTTCCATTTTGGAGAAACAGAGAGAACGAGAGACAAGAGAAGAACGAACGATGTTATTTAGAAACAACGAAACCTCCCTACTACTGTTTCTTTTTGTTTTCAATATTGAGATTATCTTTCATCGTA

mRNA sequence

CATTGTCTGAAGTCCTAAAAAGAGAGCAACTTCCAAATCTCCCATTCCATGGCCGGAATCTCTCCAATCTCCACCACCCATTTCCTCTTTCTCTCTTTCCTCCTATTCTCCGCCGTAGCTTTGGCTATAGCCGAAGATGAAAATTCCTTTGCAAGAACAGTGAAGAGAAAACGGTTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTCTCTACTGGCATGACGTTCTAAGTGGAAAAGACCCAACTTCAATCCAAATCGTTCCCCCTGTTTCGAACACTTCAATGACAAGATTCGGTGCGGTCCAAATGATAGACAACCCATTGACAGAAACTCCAGATCCCAAGTCGAAACTATGGGGAAGAGCAGAGGGATTGTACGCATCGGCTTCACAAGAGGGATCAGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAGTACAATGGAAGCTCCATCACAGTATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGTTGTTCAGATTTGCAAGAGGGTATGCGAAAGCTTCAACCGTTAATATTGATTTCACAACAGGGGATGCTGTCATTGAATATAACATTTACGTACTTCATTATTGAATTCTGCTTTTTCTTTATTTCCTTTCTTCAGTTATTCTAAAAACAAATTATTTCCATTTTGGAGAAACAGAGAGAACGAGAGACAAGAGAAGAACGAACGATGTTATTTAGAAACAACGAAACCTCCCTACTACTGTTTCTTTTTGTTTTCAATATTGAGATTATCTTTCATCGTA

Coding sequence (CDS)

ATGGCCGGAATCTCTCCAATCTCCACCACCCATTTCCTCTTTCTCTCTTTCCTCCTATTCTCCGCCGTAGCTTTGGCTATAGCCGAAGATGAAAATTCCTTTGCAAGAACAGTGAAGAGAAAACGGTTGGGTCTTAGAAAAGAGAAGCTCAGCCACTTCCGTCTCTACTGGCATGACGTTCTAAGTGGAAAAGACCCAACTTCAATCCAAATCGTTCCCCCTGTTTCGAACACTTCAATGACAAGATTCGGTGCGGTCCAAATGATAGACAACCCATTGACAGAAACTCCAGATCCCAAGTCGAAACTATGGGGAAGAGCAGAGGGATTGTACGCATCGGCTTCACAAGAGGGATCAGGGTTGTTAATGGCGATGAACTTCGCGTTTGTGAGTGGGAAGTACAATGGAAGCTCCATCACAGTATTTGGAAGAAACCCATTTTTGGAGAAAGTGAGAGAGATGCCTGTGATCGGTGGAAGTGGGTTGTTCAGATTTGCAAGAGGGTATGCGAAAGCTTCAACCGTTAATATTGATTTCACAACAGGGGATGCTGTCATTGAATATAACATTTACGTACTTCATTATTGA

Protein sequence

MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYVLHY

Homology

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BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot
Match: Q9C891 (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.8e-52
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 14  FLSFLLFSAVALAIAEDENSFARTVKRKRLGL-RKEKLSHFRLYWHDVLSGKDPTSIQIV 73
           FL+  +     ++ A D   FART+ RK LGL +KEKL+HF++YWHD+LSG +PTSI I 
Sbjct: 7   FLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 66

Query: 74  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 133
           PPV+N+S   FGA+ MIDN LT      S + G+A+G YA A+Q+  G LMAMNFAF +G
Sbjct: 67  PPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 126

Query: 134 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 193
           KYNGS+IT+ GRN  L +VREMP++GGSGLFRFARGY +A T  I+   GDA +EY+ YV
Sbjct: 127 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 186

Query: 194 LHY 196
           LHY
Sbjct: 187 LHY 187

[Close]

BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot
Match: Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 14  FLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQIV- 73
           FLSF L S+  LA+     +   T++   L  +KEKL+HFR+YWHD+++G+D +S+ I+ 
Sbjct: 4   FLSFFLISSRTLALVLISVT-GETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 63

Query: 74  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 133
           PP   T  T FG ++MIDNPLT TP   SK+ GRA+G YA  S+E  GLLMAMNFA + G
Sbjct: 64  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 123

Query: 134 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 193
           KYNGS+ITV GRN   +KVREMPVIGGSGLFRFARGY +AST   +  TG+A++EYN Y+
Sbjct: 124 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 183

Query: 194 LHY 196
           LHY
Sbjct: 184 LHY 185

[Close]

BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot
Match: Q9LID5 (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-51
Identity = 101/183 (55.19%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQIV 72
           + ++ +L  A  ++  + EN FA+T+ +K  GLRKEKL+HFR+YWHD+LSG +P+S+ I 
Sbjct: 7   IIVTQILLIAAVVSARKGEN-FAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 66

Query: 73  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 132
           PP+SN+S   FG+V +IDN LT      S L G+A+G+YA+  Q  +  LM MNFAF +G
Sbjct: 67  PPISNSSF--FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 126

Query: 133 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 192
           KYNGSSI + GRN  L KVREMPVIGGSGLFRFARGY +A T+  D  +GDA +EY+ YV
Sbjct: 127 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 193 LHY 196
           LHY
Sbjct: 187 LHY 186

[Close]

BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot
Match: Q9FI66 (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.5e-49
Identity = 100/185 (54.05%), Postives = 134/185 (72.43%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAIAEDENSFARTVKRKRLGL-RKEKLSHFRLYWHDVLSGKDPTSIQI 72
           L    LL +A ALA  ++   FART+ RK LGL +KEKL+H R+YWHD+++G++P+SI+I
Sbjct: 8   LTAQILLLTATALA-GKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRI 67

Query: 73  VPPVSN-TSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFV 132
             PV+  +S + FG++ MIDN LT      S + G+A+G+Y  A+Q+  GLLMAMN AF 
Sbjct: 68  QGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFK 127

Query: 133 SGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNI 192
           +GKYNGS+IT+ GRN  + KVREMPV+GGSG+FRFARGY +A T   D  TGDA +E N 
Sbjct: 128 TGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNC 187

Query: 193 YVLHY 196
           Y+LHY
Sbjct: 188 YILHY 191

[Close]

BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-44
Identity = 91/185 (49.19%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 12  FLFLSFLLFSAVALAIAEDEN-SFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQ 71
           +L L   LF A+ LA    E+ SF+ TVK    G + +KL+H   Y+HD++SG  PTS+Q
Sbjct: 5   YLLLLLPLFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQ 64

Query: 72  IV-PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAF 131
           +   P +N+S T FG V ++D+ LT  P+  S+  GRA+G+YASA Q   GLLMA N  F
Sbjct: 65  VANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVF 124

Query: 132 VSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYN 191
             GK++ S++ ++GRNP L KVREMP+IGG+G FRF RGYA A T+  + T+GDAV+EYN
Sbjct: 125 TKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYN 184

Query: 192 IYVLH 195
           +Y+ H
Sbjct: 185 VYIWH 189

[Close]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL
Match: A0A5D3DDN5 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00400 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.3e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG
Sbjct: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVIEYNIYVLHY 196
           TGDAVIEYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL
Match: A0A1S3BNT1 (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491574 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.3e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG
Sbjct: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVIEYNIYVLHY 196
           TGDAVIEYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL
Match: A0A0A0L1S2 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280630 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100
Identity = 187/195 (95.90%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPIS THFLFLSFLLFSA+ALAIAEDENSFARTV RKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISPTHFLFLSFLLFSAIALAIAEDENSFARTVNRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTS+QIVPPVSNTSMTRFGAVQMIDNPLTET D KSKLWGRAEGLYASASQ+GSG
Sbjct: 61  LSGKDPTSMQIVPPVSNTSMTRFGAVQMIDNPLTETADIKSKLWGRAEGLYASASQDGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSIT+FGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 121 LLMAMNFAFVSGKYNGSSITIFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVIEYNIYVLHY 196
           TGDAVIEYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL
Match: A0A0A0L0G5 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280640 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93
Identity = 173/195 (88.72%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALA+AED+NSFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           L+GK PTSIQIVPP SNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180

Query: 181 TGDAVIEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL
Match: A0A5A7T9F1 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00200 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.8e-92
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPIS THFLFLSFLL S VALAIAEDE SFARTV+RKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISATHFLFLSFLLSSVVALAIAEDEPSFARTVERKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGK PTSIQIVPPVSNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LSGKYPTSIQIVPPVSNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDKFG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPF+EKVREMPVIGGSGLFRFARGYA+AST  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEASTKKVDFK 180

Query: 181 TGDAVIEYNIYVLHY 196
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. NCBI nr
Match: XP_008449790.1 (PREDICTED: dirigent protein 7-like [Cucumis melo] >KAA0040053.1 dirigent protein 7-like [Cucumis melo var. makuwa] >TYK21676.1 dirigent protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (990), Expect = 5.49e-135
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG
Sbjct: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVIEYNIYVLHY 195
           TGDAVIEYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. NCBI nr
Match: XP_004142157.2 (dirigent protein 7 [Cucumis sativus])

HSP 1 Score: 371 bits (953), Expect = 2.41e-129
Identity = 187/195 (95.90%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPIS THFLFLSFLLFSA+ALAIAEDENSFARTV RKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISPTHFLFLSFLLFSAIALAIAEDENSFARTVNRKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTS+QIVPPVSNTSMTRFGAVQMIDNPLTET D KSKLWGRAEGLYASASQ+GSG
Sbjct: 61  LSGKDPTSMQIVPPVSNTSMTRFGAVQMIDNPLTETADIKSKLWGRAEGLYASASQDGSG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSIT+FGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 121 LLMAMNFAFVSGKYNGSSITIFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180

Query: 181 TGDAVIEYNIYVLHY 195
           TGDAVIEYNIYVLHY
Sbjct: 181 TGDAVIEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. NCBI nr
Match: KGN54470.2 (hypothetical protein Csa_017942 [Cucumis sativus])

HSP 1 Score: 371 bits (953), Expect = 7.04e-126
Identity = 187/195 (95.90%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPIS THFLFLSFLLFSA+ALAIAEDENSFARTV RKRLGLRKEKLSHFRLYWHDV
Sbjct: 233 MAGISPISPTHFLFLSFLLFSAIALAIAEDENSFARTVNRKRLGLRKEKLSHFRLYWHDV 292

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGKDPTS+QIVPPVSNTSMTRFGAVQMIDNPLTET D KSKLWGRAEGLYASASQ+GSG
Sbjct: 293 LSGKDPTSMQIVPPVSNTSMTRFGAVQMIDNPLTETADIKSKLWGRAEGLYASASQDGSG 352

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSSIT+FGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT
Sbjct: 353 LLMAMNFAFVSGKYNGSSITIFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 412

Query: 181 TGDAVIEYNIYVLHY 195
           TGDAVIEYNIYVLHY
Sbjct: 413 TGDAVIEYNIYVLHY 427

[Close]

BLAST of IVF0017433.2 vs. NCBI nr
Match: XP_004142156.1 (dirigent protein 19 [Cucumis sativus] >KGN54087.1 hypothetical protein Csa_018076 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 8.30e-121
Identity = 173/195 (88.72%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPISTTHFLFLSFLLFSAVALA+AED+NSFARTV RKRLGLRKEKLSHFR YWHDV
Sbjct: 1   MAGISPISTTHFLFLSFLLFSAVALAVAEDQNSFARTVNRKRLGLRKEKLSHFRFYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           L+GK PTSIQIVPP SNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LTGKYPTSIQIVPPASNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDQFG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPFLEKVREMPVIGGSGLFRFARGYAKA+T  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFLEKVREMPVIGGSGLFRFARGYAKATTNKVDFK 180

Query: 181 TGDAVIEYNIYVLHY 195
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. NCBI nr
Match: XP_008449789.1 (PREDICTED: dirigent protein 20-like [Cucumis melo] >KAA0040052.1 dirigent protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 345 bits (886), Expect = 3.94e-119
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MAGISPISTTHFLFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDV 60
           MAGISPIS THFLFLSFLL S VALAIAEDE SFARTV+RKRLGLRKEKLSHFRLYWHDV
Sbjct: 1   MAGISPISATHFLFLSFLLSSVVALAIAEDEPSFARTVERKRLGLRKEKLSHFRLYWHDV 60

Query: 61  LSGKDPTSIQIVPPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSG 120
           LSGK PTSIQIVPPVSNTSMT FG V MIDNPLTETPDPKSKLWGRA+GLYASASQ+  G
Sbjct: 61  LSGKYPTSIQIVPPVSNTSMTGFGLVNMIDNPLTETPDPKSKLWGRAQGLYASASQDKFG 120

Query: 121 LLMAMNFAFVSGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFT 180
           LLMAMNFAFVSGKYNGSS+T+FGRNPF+EKVREMPVIGGSGLFRFARGYA+AST  +DF 
Sbjct: 121 LLMAMNFAFVSGKYNGSSLTIFGRNPFMEKVREMPVIGGSGLFRFARGYAEASTKKVDFK 180

Query: 181 TGDAVIEYNIYVLHY 195
           TGDAV+EYNIYVLHY
Sbjct: 181 TGDAVVEYNIYVLHY 195

[Close]

BLAST of IVF0017433.2 vs. TAIR 10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 14  FLSFLLFSAVALAIAEDENSFARTVKRKRLGL-RKEKLSHFRLYWHDVLSGKDPTSIQIV 73
           FL+  +     ++ A D   FART+ RK LGL +KEKL+HF++YWHD+LSG +PTSI I 
Sbjct: 7   FLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 66

Query: 74  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 133
           PPV+N+S   FGA+ MIDN LT      S + G+A+G YA A+Q+  G LMAMNFAF +G
Sbjct: 67  PPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 126

Query: 134 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 193
           KYNGS+IT+ GRN  L +VREMP++GGSGLFRFARGY +A T  I+   GDA +EY+ YV
Sbjct: 127 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 186

Query: 194 LHY 196
           LHY
Sbjct: 187 LHY 187

[Close]

BLAST of IVF0017433.2 vs. TAIR 10
Match: AT1G55210.2 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 14  FLSFLLFSAVALAIAEDENSFARTVKRKRLGL-RKEKLSHFRLYWHDVLSGKDPTSIQIV 73
           FL+  +     ++ A D   FART+ RK LGL +KEKL+HF++YWHD+LSG +PTSI I 
Sbjct: 7   FLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQ 66

Query: 74  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 133
           PPV+N+S   FGA+ MIDN LT      S + G+A+G YA A+Q+  G LMAMNFAF +G
Sbjct: 67  PPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTG 126

Query: 134 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 193
           KYNGS+IT+ GRN  L +VREMP++GGSGLFRFARGY +A T  I+   GDA +EY+ YV
Sbjct: 127 KYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYV 186

Query: 194 LHY 196
           LHY
Sbjct: 187 LHY 187

[Close]

BLAST of IVF0017433.2 vs. TAIR 10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 14  FLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQIV- 73
           FLSF L S+  LA+     +   T++   L  +KEKL+HFR+YWHD+++G+D +S+ I+ 
Sbjct: 4   FLSFFLISSRTLALVLISVT-GETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 63

Query: 74  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 133
           PP   T  T FG ++MIDNPLT TP   SK+ GRA+G YA  S+E  GLLMAMNFA + G
Sbjct: 64  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 123

Query: 134 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 193
           KYNGS+ITV GRN   +KVREMPVIGGSGLFRFARGY +AST   +  TG+A++EYN Y+
Sbjct: 124 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 183

Query: 194 LHY 196
           LHY
Sbjct: 184 LHY 185

[Close]

BLAST of IVF0017433.2 vs. TAIR 10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.8e-52
Identity = 101/183 (55.19%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAIAEDENSFARTVKRKRLGLRKEKLSHFRLYWHDVLSGKDPTSIQIV 72
           + ++ +L  A  ++  + EN FA+T+ +K  GLRKEKL+HFR+YWHD+LSG +P+S+ I 
Sbjct: 7   IIVTQILLIAAVVSARKGEN-FAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSVVIN 66

Query: 73  PPVSNTSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFVSG 132
           PP+SN+S   FG+V +IDN LT      S L G+A+G+YA+  Q  +  LM MNFAF +G
Sbjct: 67  PPISNSSF--FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTG 126

Query: 133 KYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNIYV 192
           KYNGSSI + GRN  L KVREMPVIGGSGLFRFARGY +A T+  D  +GDA +EY+ YV
Sbjct: 127 KYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYV 186

Query: 193 LHY 196
           LHY
Sbjct: 187 LHY 186

[Close]

BLAST of IVF0017433.2 vs. TAIR 10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50
Identity = 100/185 (54.05%), Postives = 134/185 (72.43%), Query Frame = 0


Query: 13  LFLSFLLFSAVALAIAEDENSFARTVKRKRLGL-RKEKLSHFRLYWHDVLSGKDPTSIQI 72
           L    LL +A ALA  ++   FART+ RK LGL +KEKL+H R+YWHD+++G++P+SI+I
Sbjct: 8   LTAQILLLTATALA-GKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRI 67

Query: 73  VPPVSN-TSMTRFGAVQMIDNPLTETPDPKSKLWGRAEGLYASASQEGSGLLMAMNFAFV 132
             PV+  +S + FG++ MIDN LT      S + G+A+G+Y  A+Q+  GLLMAMN AF 
Sbjct: 68  QGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFK 127

Query: 133 SGKYNGSSITVFGRNPFLEKVREMPVIGGSGLFRFARGYAKASTVNIDFTTGDAVIEYNI 192
           +GKYNGS+IT+ GRN  + KVREMPV+GGSG+FRFARGY +A T   D  TGDA +E N 
Sbjct: 128 TGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNC 187

Query: 193 YVLHY 196
           Y+LHY
Sbjct: 188 YILHY 191

The following BLAST results are available for this feature:

BLAST of IVF0017433.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C891	4.8e-52	56.83	Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1	[more]
Q9C523	1.4e-51	56.83	Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1	[more]
Q9LID5	5.3e-51	55.19	Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1	[more]
Q9FI66	6.5e-49	54.05	Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1	[more]
Q9SS03	4.8e-44	49.19	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]

BLAST of IVF0017433.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDN5	3.3e-104	100.00	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G004...	[more]
A0A1S3BNT1	3.3e-104	100.00	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491574 PE=3 SV=1	[more]
A0A0A0L1S2	6.4e-100	95.90	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280630 PE=3 SV=1	[more]
A0A0A0L0G5	2.0e-93	88.72	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280640 PE=3 SV=1	[more]
A0A5A7T9F1	3.8e-92	88.72	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G002...	[more]

BLAST of IVF0017433.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449790.1	5.49e-135	100.00	PREDICTED: dirigent protein 7-like [Cucumis melo] >KAA0040053.1 dirigent protein...	[more]
XP_004142157.2	2.41e-129	95.90	dirigent protein 7 [Cucumis sativus]	[more]
KGN54470.2	7.04e-126	95.90	hypothetical protein Csa_017942 [Cucumis sativus]	[more]
XP_004142156.1	8.30e-121	88.72	dirigent protein 19 [Cucumis sativus] >KGN54087.1 hypothetical protein Csa_01807...	[more]
XP_008449789.1	3.94e-119	88.72	PREDICTED: dirigent protein 20-like [Cucumis melo] >KAA0040052.1 dirigent protei...	[more]

BLAST of IVF0017433.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55210.1	3.4e-53	56.83	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.2	3.4e-53	56.83	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G58170.1	1.0e-52	56.83	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G13650.1	3.8e-52	55.19	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G49040.1	4.6e-50	54.05	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 51..192 e-value: 1.3E-52 score: 177.5
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 38..191 e-value: 6.1E-18 score: 67.0
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 11..194
None	No IPR available	PANTHER	PTHR21495:SF190	DIRIGENT PROTEIN 7	coord: 11..194

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0017433	IVF0017433	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0017433.2-five_prime_utr	IVF0017433.2-five_prime_utr-chr05:536932..536979	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0017433.2-exon	IVF0017433.2-exon-chr05:536932..537743	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0017433.2-cds	IVF0017433.2-cds-chr05:536980..537567	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0017433.2-three_prime_utr	IVF0017433.2-three_prime_utr-chr05:537568..537743	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0017433.2	IVF0017433.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding