IVF0016465.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0016465.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription factor bHLH149-like protein
Location	chr05: 22680456 .. 22681467 (-)
Sequence length	882
RNA-Seq Expression	IVF0016465.1
Synteny	IVF0016465.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAATGGGAAAGAAGAGAGAGAGAGAGAGAGGAAGAGAAAGGGAAGTAAACGTGTTTGAAGGACTCAGAACGCGTGATATTTTTCCCGTGATTCTTTTAAACCCTTTCTTTCTCTCTCAAAACTCAAACTCTTCATTCAATTCTTTCAATCTCTTCAATTGGTATATTCATTCATTCATTCTTCTTCTTCATTCAATCGCTACTTCCTTGTTTTTGCCTCATGTAATTATTTTGTTTCTCTGTCCTATTGCAGATTCTCTCGCTGATTTCTTTCTAATTCAACGCTTTCAGCTTATACTATTCCATGGACGCCGATCAATCTAACAATTCCACAACGTTATTGCCGCACCCGGCCAATAAGCGACCACCTAAAATTATAACCGACGAACCTACTCAACACACATGGAAAACTGAAATCCAGCAACAGATCTACTCATCTAGGCTCGCGGAAGCGCTTCGCCGAGTCACTCATCCACGCTCCTCATCTACGATTAACGGAAACCTAGTTCGCCAAACTGCGGATTCTGTACTCGCCGCTACAGCCAAGGGGAGGTCTCGATGGAGTCGAGCGATTCTAGCCACTCGATTCCGCCAGAGCCTTGCCAGACGACGACGGAGGACGAAGAAATTACTCGCTCGTAAACCGGAGCTCAAGAACGAGAAGGCTAGGAAGTTACCTGCGGTGCAAAGGAAGGTGAAAATTCTTGGCCGCTTGGTTCCTGGTTGTCGGAAACTCTCGTTCCCGAATCTTCTGGAAGAAGCGACGGATTATATATCGGCTTTAGAGATGCAGGTAAAAGCCATGACGGCGCTCGCTGAACTCCTCGCCGGAAATCAAAGGAATATCGCCGGAATCTCTAACGATTCTTGAGATTGGTAATCGTTCCATAGATTCGGAAATCGGGATCGCCGCCGTGGTTTTTTTTTCCCTTCTTCTCCAATTGATATATATATATATATTTGTTCCCGGCGGTAATATTATTTTTATTTGTTTTGTTGTTATTCCATA

mRNA sequence

GAAGAAATGGGAAAGAAGAGAGAGAGAGAGAGAGGAAGAGAAAGGGAAGTAAACGTGTTTGAAGGACTCAGAACGCGTGATATTTTTCCCGTGATTCTTTTAAACCCTTTCTTTCTCTCTCAAAACTCAAACTCTTCATTCAATTCTTTCAATCTCTTCAATTGCTTATACTATTCCATGGACGCCGATCAATCTAACAATTCCACAACGTTATTGCCGCACCCGGCCAATAAGCGACCACCTAAAATTATAACCGACGAACCTACTCAACACACATGGAAAACTGAAATCCAGCAACAGATCTACTCATCTAGGCTCGCGGAAGCGCTTCGCCGAGTCACTCATCCACGCTCCTCATCTACGATTAACGGAAACCTAGTTCGCCAAACTGCGGATTCTGTACTCGCCGCTACAGCCAAGGGGAGGTCTCGATGGAGTCGAGCGATTCTAGCCACTCGATTCCGCCAGAGCCTTGCCAGACGACGACGGAGGACGAAGAAATTACTCGCTCGTAAACCGGAGCTCAAGAACGAGAAGGCTAGGAAGTTACCTGCGGTGCAAAGGAAGGTGAAAATTCTTGGCCGCTTGGTTCCTGGTTGTCGGAAACTCTCGTTCCCGAATCTTCTGGAAGAAGCGACGGATTATATATCGGCTTTAGAGATGCAGGTAAAAGCCATGACGGCGCTCGCTGAACTCCTCGCCGGAAATCAAAGGAATATCGCCGGAATCTCTAACGATTCTTGAGATTGGTAATCGTTCCATAGATTCGGAAATCGGGATCGCCGCCGTGGTTTTTTTTTCCCTTCTTCTCCAATTGATATATATATATATATTTGTTCCCGGCGGTAATATTATTTTTATTTGTTTTGTTGTTATTCCATA

Coding sequence (CDS)

ATGGGAAAGAAGAGAGAGAGAGAGAGAGGAAGAGAAAGGGAAGTAAACGTGTTTGAAGGACTCAGAACGCGTGATATTTTTCCCGTGATTCTTTTAAACCCTTTCTTTCTCTCTCAAAACTCAAACTCTTCATTCAATTCTTTCAATCTCTTCAATTGCTTATACTATTCCATGGACGCCGATCAATCTAACAATTCCACAACGTTATTGCCGCACCCGGCCAATAAGCGACCACCTAAAATTATAACCGACGAACCTACTCAACACACATGGAAAACTGAAATCCAGCAACAGATCTACTCATCTAGGCTCGCGGAAGCGCTTCGCCGAGTCACTCATCCACGCTCCTCATCTACGATTAACGGAAACCTAGTTCGCCAAACTGCGGATTCTGTACTCGCCGCTACAGCCAAGGGGAGGTCTCGATGGAGTCGAGCGATTCTAGCCACTCGATTCCGCCAGAGCCTTGCCAGACGACGACGGAGGACGAAGAAATTACTCGCTCGTAAACCGGAGCTCAAGAACGAGAAGGCTAGGAAGTTACCTGCGGTGCAAAGGAAGGTGAAAATTCTTGGCCGCTTGGTTCCTGGTTGTCGGAAACTCTCGTTCCCGAATCTTCTGGAAGAAGCGACGGATTATATATCGGCTTTAGAGATGCAGGTAAAAGCCATGACGGCGCTCGCTGAACTCCTCGCCGGAAATCAAAGGAATATCGCCGGAATCTCTAACGATTCTTGA

Protein sequence

MGKKRERERGREREVNVFEGLRTRDIFPVILLNPFFLSQNSNSSFNSFNLFNCLYYSMDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSSSTINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRNIAGISNDS

Homology

[Close]

BLAST of IVF0016465.1 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-31
Identity = 88/160 (55.00%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 84  DEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSSSTINGNL----------VRQTADSVL 143
           +E +   WKT   QQIY+ +L EALRRV   RSS+T N             +R TAD VL
Sbjct: 37  NEESLKRWKTNRVQQIYACKLVEALRRV-RQRSSTTSNNETDKLVSGAAREIRDTADRVL 96

Query: 144 AATAKGRSRWSRAILATRFRQSLARRRRRTKKL--LARKPELKNEKARKLPAVQRKVKIL 203
           AA+A+G +RWSRAILA+R R  L + R+  K       +  L      KLPAV+RK+KIL
Sbjct: 97  AASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKIL 156

Query: 204 GRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELL 232
           GRLVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALAELL
Sbjct: 157 GRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELL 195

[Close]

BLAST of IVF0016465.1 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 84  DEPTQH---TWKTEIQQQIYSSRLAEALRRVTHPRSSSTINGNLVRQTADSVLAATAKGR 143
           + P +H    W+    Q++YS +L +AL+R    R S+T     VR TAD VLA TA+G 
Sbjct: 53  EAPVRHLSRRWRATTAQKVYSLKLYDALQR---SRRSAT-----VRDTADKVLATTARGA 112

Query: 144 SRWSRAILATRFRQSLARRRRRTKKLLARKPELKNE----KARKLPAVQRKVKILGRLVP 203
           +RWSRAIL +RF  SL RRRR TK   A    ++      + RKL AV  +V++LG LVP
Sbjct: 113 TRWSRAILVSRFGTSL-RRRRNTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVP 172

Query: 204 GCRKLSFPNLLEEATDYISALEMQVKAMTALAELLA 233
           GCR+ + P LL+E  DYI+ALEMQV+AMTAL+++L+
Sbjct: 173 GCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]

BLAST of IVF0016465.1 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.9e-23
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 91  WKTEIQQQIYSSRLAEALRRVTHPRSSSTIN-------GNLVRQTADSVLAATAKGRSRW 150
           W++E QQ+IYS++L +AL++V    S+ST +       G  VR+ AD  LA +A+GR+ W
Sbjct: 48  WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW 107

Query: 151 SRAILATRFRQSLARRRRRTKKLLA-----------------RKPELKNEKARKLPAVQR 210
           SRAILA R +    R++RR +  +A                 R+  +     + +P V R
Sbjct: 108 SRAILANRIKLKF-RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 167

Query: 211 KVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLA 233
           KV++LGRLVPGC K S P +LEEATDYI ALEMQV+AM +L +LL+
Sbjct: 168 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of IVF0016465.1 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-22
Identity = 79/199 (39.70%), Postives = 109/199 (54.77%), Query Frame = 0


Query: 63  SNNSTTLLPHPANKRPPKIITDEPTQ----HTWKTEIQQQIYSSRLAEALRRV---THPR 122
           S+NS         K  P  +   P+       W++E QQQIYS++L  ALR +     P 
Sbjct: 18  SSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 77

Query: 123 SSSTIN----GNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRR---------- 182
           SSS+ +    G  VR+ AD  LA  A+G++ WSRAIL+   +    + +R          
Sbjct: 78  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 137

Query: 183 ------RTKKLLARKPELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYIS 235
                 R+KK  A    L   KA+ LPAVQRKVK+L RLVPGCRK S P +LEE TDYI+
Sbjct: 138 LTTGSIRSKKQRATVLRL---KAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIA 197

[Close]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL
Match: A0A5A7TYM9 (Transcription factor bHLH149-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001010 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.3e-93
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS
Sbjct: 1   MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 177
           STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK
Sbjct: 61  STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 120

Query: 178 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 237
           ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN
Sbjct: 121 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 180

Query: 238 IAGISNDS 246
           IAGISNDS
Sbjct: 181 IAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL
Match: A0A1S4E5A3 (transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103503137 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 6.2e-92
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDADQSNNSTTLLPHPANKRPPKI+T EPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS
Sbjct: 1   MDADQSNNSTTLLPHPANKRPPKILTAEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 177
           STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK
Sbjct: 61  STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 120

Query: 178 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 237
           ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN
Sbjct: 121 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 180

Query: 238 IAGISNDS 246
           IAGISNDS
Sbjct: 181 IAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL
Match: A0A0A0LJ14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.0e-79
Identity = 169/189 (89.42%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDAD SNNS TLL H +NK  PKI+T EPTQH WKTEIQQQIYSSRL +ALRRVTHPRSS
Sbjct: 1   MDADDSNNSKTLLQH-SNKCLPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRT-KKLLARKPELKNE 177
           S +NGNLVR+TADSVLAATAKGR+RWSRAILATRFRQSLARRRRRT KKLLARKPELK E
Sbjct: 61  SPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARRRRRTKKKLLARKPELKTE 120

Query: 178 KARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR 237
           K RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR
Sbjct: 121 KVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR 180

Query: 238 NIAGISNDS 246
           N AGISNDS
Sbjct: 181 NFAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL
Match: A0A6J1KCR3 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 137/195 (70.26%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKR--PPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPR 117
           MDA++S NS   L  P NKR      ++ E  +  W+TE++QQIYSSRLAEAL+RV+  R
Sbjct: 1   MDAEESKNSRRSLQKP-NKRLQIASNVSAEGRERRWRTEVEQQIYSSRLAEALQRVSRQR 60

Query: 118 SS----STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKP 177
           SS    STING LVR+TAD VLAA AKGR+RWSRAILA RFRQ LA RRRRTKK + RKP
Sbjct: 61  SSPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLA-RRRRTKKSIGRKP 120

Query: 178 ELKNE-KARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAEL 237
               E K RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+
Sbjct: 121 SRVEEVKNRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 180

Query: 238 LAGNQRNIAGISNDS 246
           LAG Q N+  ISNDS
Sbjct: 181 LAGAQSNLLPISNDS 193

[Close]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL
Match: A0A6J1G430 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54
Identity = 133/194 (68.56%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRP-PKIITDEPTQHTWKTEIQQQIYSSRLAEALRRV----T 117
           MDA++S NS   L  P  +R     ++ E  +  W+TE++QQIYSSRLAEAL+RV    +
Sbjct: 1   MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPS 60

Query: 118 HPRSSSTINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPE 177
            P + STING LVR+TAD VLAA AKGR+RWSRAILA RFRQ LA RRRRTKK + RKP 
Sbjct: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLA-RRRRTKKSIGRKPS 120

Query: 178 LKNE-KARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELL 237
              E K RKLPAVQRKV+ILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+L
Sbjct: 121 RVAEVKNRKLPAVQRKVRILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEIL 180

Query: 238 AGNQRNIAGISNDS 246
           AG QRN+  ISNDS
Sbjct: 181 AGAQRNLLPISNDS 193

[Close]

BLAST of IVF0016465.1 vs. NCBI nr
Match: KAA0048078.1 (transcription factor bHLH149-like protein [Cucumis melo var. makuwa] >TYJ96458.1 transcription factor bHLH149-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (906), Expect = 2.01e-121
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS
Sbjct: 1   MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 177
           STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK
Sbjct: 61  STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 120

Query: 178 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 237
           ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN
Sbjct: 121 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 180

Query: 238 IAGISNDS 245
           IAGISNDS
Sbjct: 181 IAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. NCBI nr
Match: XP_016903402.1 (PREDICTED: transcription factor bHLH149-like [Cucumis melo])

HSP 1 Score: 349 bits (896), Expect = 6.71e-120
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDADQSNNSTTLLPHPANKRPPKI+T EPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS
Sbjct: 1   MDADQSNNSTTLLPHPANKRPPKILTAEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 177
           STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK
Sbjct: 61  STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKPELKNEK 120

Query: 178 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 237
           ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN
Sbjct: 121 ARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQRN 180

Query: 238 IAGISNDS 245
           IAGISNDS
Sbjct: 181 IAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. NCBI nr
Match: XP_004144744.1 (transcription factor bHLH149 [Cucumis sativus] >KGN61009.1 hypothetical protein Csa_021144 [Cucumis sativus])

HSP 1 Score: 306 bits (785), Expect = 5.35e-103
Identity = 169/189 (89.42%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSS 117
           MDAD SNNS TLL H +NK  PKI+T EPTQH WKTEIQQQIYSSRL +ALRRVTHPRSS
Sbjct: 1   MDADDSNNSKTLLQH-SNKCLPKILTPEPTQHRWKTEIQQQIYSSRLTQALRRVTHPRSS 60

Query: 118 STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKK-LLARKPELKNE 177
           S +NGNLVR+TADSVLAATAKGR+RWSRAILATRFRQSLARRRRRTKK LLARKPELK E
Sbjct: 61  SPLNGNLVRRTADSVLAATAKGRTRWSRAILATRFRQSLARRRRRTKKKLLARKPELKTE 120

Query: 178 KARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR 237
           K RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR
Sbjct: 121 KVRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLAGNQR 180

Query: 238 NIAGISNDS 245
           N AGISNDS
Sbjct: 181 NFAGISNDS 188

[Close]

BLAST of IVF0016465.1 vs. NCBI nr
Match: XP_038890546.1 (transcription factor bHLH149 [Benincasa hispida])

HSP 1 Score: 246 bits (629), Expect = 3.67e-79
Identity = 147/199 (73.87%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPPKIITD---EPTQHTWKTEIQQQIYSSRLAEALRRVTHP 117
           MDA++S NS  LL  P N+R  KI++D   E  +  W+TE++QQIYSSRLAEALRRV+  
Sbjct: 1   MDAEESKNSRRLLEQPNNRR--KIVSDVTAEGREQRWRTEVEQQIYSSRLAEALRRVSRR 60

Query: 118 RSSS----TINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARK 177
           RSSS     ING LVR+TAD VLAATAKGR+RWSRAILA+RFRQ LARRRR TKKLL  K
Sbjct: 61  RSSSYARSPINGRLVRETADCVLAATAKGRTRWSRAILASRFRQRLARRRR-TKKLLGCK 120

Query: 178 P----ELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTA 237
           P    E KNEK RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAM A
Sbjct: 121 PSRVAEAKNEKIRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAA 180

Query: 238 LAELLAGNQRNIAGISNDS 245
           LAELLAG Q N+ GISNDS
Sbjct: 181 LAELLAGTQSNLLGISNDS 196

[Close]

BLAST of IVF0016465.1 vs. NCBI nr
Match: XP_022999326.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 224 bits (571), Expect = 2.11e-70
Identity = 137/195 (70.26%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 58  MDADQSNNSTTLLPHPANKRPP--KIITDEPTQHTWKTEIQQQIYSSRLAEALRRVTHPR 117
           MDA++S NS   L  P NKR      ++ E  +  W+TE++QQIYSSRLAEAL+RV+  R
Sbjct: 1   MDAEESKNSRRSLQKP-NKRLQIASNVSAEGRERRWRTEVEQQIYSSRLAEALQRVSRQR 60

Query: 118 SS----STINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKP 177
           SS    STING LVR+TAD VLAA AKGR+RWSRAILA RFRQ LARRRR TKK + RKP
Sbjct: 61  SSPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRR-TKKSIGRKP 120

Query: 178 ELKNE-KARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAEL 237
               E K RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAM ALAE+
Sbjct: 121 SRVEEVKNRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAEI 180

Query: 238 LAGNQRNIAGISNDS 245
           LAG Q N+  ISNDS
Sbjct: 181 LAGAQSNLLPISNDS 193

[Close]

BLAST of IVF0016465.1 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-32
Identity = 88/160 (55.00%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 84  DEPTQHTWKTEIQQQIYSSRLAEALRRVTHPRSSSTINGNL----------VRQTADSVL 143
           +E +   WKT   QQIY+ +L EALRRV   RSS+T N             +R TAD VL
Sbjct: 37  NEESLKRWKTNRVQQIYACKLVEALRRV-RQRSSTTSNNETDKLVSGAAREIRDTADRVL 96

Query: 144 AATAKGRSRWSRAILATRFRQSLARRRRRTKKL--LARKPELKNEKARKLPAVQRKVKIL 203
           AA+A+G +RWSRAILA+R R  L + R+  K       +  L      KLPAV+RK+KIL
Sbjct: 97  AASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKIL 156

Query: 204 GRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELL 232
           GRLVPGCRK+S PNLL+EATDYI+ALEMQV+AM ALAELL
Sbjct: 157 GRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAELL 195

[Close]

BLAST of IVF0016465.1 vs. TAIR 10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 )

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-25
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 84  DEPTQH---TWKTEIQQQIYSSRLAEALRRVTHPRSSSTINGNLVRQTADSVLAATAKGR 143
           + P +H    W+    Q++YS +L +AL+R    R S+T     VR TAD VLA TA+G 
Sbjct: 53  EAPVRHLSRRWRATTAQKVYSLKLYDALQR---SRRSAT-----VRDTADKVLATTARGA 112

Query: 144 SRWSRAILATRFRQSLARRRRRTKKLLARKPELKNE----KARKLPAVQRKVKILGRLVP 203
           +RWSRAIL +RF  SL RRRR TK   A    ++      + RKL AV  +V++LG LVP
Sbjct: 113 TRWSRAILVSRFGTSL-RRRRNTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVP 172

Query: 204 GCRKLSFPNLLEEATDYISALEMQVKAMTALAELLA 233
           GCR+ + P LL+E  DYI+ALEMQV+AMTAL+++L+
Sbjct: 173 GCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]

BLAST of IVF0016465.1 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-24
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 91  WKTEIQQQIYSSRLAEALRRVTHPRSSSTIN-------GNLVRQTADSVLAATAKGRSRW 150
           W++E QQ+IYS++L +AL++V    S+ST +       G  VR+ AD  LA +A+GR+ W
Sbjct: 48  WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW 107

Query: 151 SRAILATRFRQSLARRRRRTKKLLA-----------------RKPELKNEKARKLPAVQR 210
           SRAILA R +    R++RR +  +A                 R+  +     + +P V R
Sbjct: 108 SRAILANRIKLKF-RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 167

Query: 211 KVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLA 233
           KV++LGRLVPGC K S P +LEEATDYI ALEMQV+AM +L +LL+
Sbjct: 168 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of IVF0016465.1 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-24
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 91  WKTEIQQQIYSSRLAEALRRVTHPRSSSTIN-------GNLVRQTADSVLAATAKGRSRW 150
           W++E QQ+IYS++L +AL++V    S+ST +       G  VR+ AD  LA +A+GR+ W
Sbjct: 48  WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLW 107

Query: 151 SRAILATRFRQSLARRRRRTKKLLA-----------------RKPELKNEKARKLPAVQR 210
           SRAILA R +    R++RR +  +A                 R+  +     + +P V R
Sbjct: 108 SRAILANRIKLKF-RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 167

Query: 211 KVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAELLA 233
           KV++LGRLVPGC K S P +LEEATDYI ALEMQV+AM +L +LL+
Sbjct: 168 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of IVF0016465.1 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 79/199 (39.70%), Postives = 109/199 (54.77%), Query Frame = 0


Query: 63  SNNSTTLLPHPANKRPPKIITDEPTQ----HTWKTEIQQQIYSSRLAEALRRV---THPR 122
           S+NS         K  P  +   P+       W++E QQQIYS++L  ALR +     P 
Sbjct: 18  SSNSDRSRRKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQPS 77

Query: 123 SSSTIN----GNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRR---------- 182
           SSS+ +    G  VR+ AD  LA  A+G++ WSRAIL+   +    + +R          
Sbjct: 78  SSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTT 137

Query: 183 ------RTKKLLARKPELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYIS 235
                 R+KK  A    L   KA+ LPAVQRKVK+L RLVPGCRK S P +LEE TDYI+
Sbjct: 138 LTTGSIRSKKQRATVLRL---KAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIA 197

The following BLAST results are available for this feature:

BLAST of IVF0016465.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80482	3.5e-31	55.00	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	4.1e-24	48.08	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]
Q9C8Z9	5.9e-23	43.37	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
Q9LSN7	1.7e-22	39.70	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]

BLAST of IVF0016465.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYM9	4.3e-93	100.00	Transcription factor bHLH149-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4E5A3	6.2e-92	98.94	transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103503137 PE=4 S...	[more]
A0A0A0LJ14	6.0e-79	89.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034620 PE=4 SV=1	[more]
A0A6J1KCR3	3.9e-54	70.26	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE...	[more]
A0A6J1G430	3.9e-54	68.56	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 ...	[more]

BLAST of IVF0016465.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048078.1	2.01e-121	100.00	transcription factor bHLH149-like protein [Cucumis melo var. makuwa] >TYJ96458.1...	[more]
XP_016903402.1	6.71e-120	98.94	PREDICTED: transcription factor bHLH149-like [Cucumis melo]	[more]
XP_004144744.1	5.35e-103	89.42	transcription factor bHLH149 [Cucumis sativus] >KGN61009.1 hypothetical protein ...	[more]
XP_038890546.1	3.67e-79	73.87	transcription factor bHLH149 [Benincasa hispida]	[more]
XP_022999326.1	2.11e-70	70.26	transcription factor bHLH149-like [Cucurbita maxima]	[more]

BLAST of IVF0016465.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09250.1	2.5e-32	55.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G05800.1	2.9e-25	48.08	AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1	[more]
AT3G06590.1	4.2e-24	43.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	4.2e-24	43.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	1.2e-23	39.70	sequence-specific DNA binding transcription factors	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 83..236
None	No IPR available	PANTHER	PTHR33124:SF12	TRANSCRIPTION FACTOR BHLH148	coord: 83..236
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 168..217 score: 8.790841
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 173..228 e-value: 3.2881E-18 score: 73.8108
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 185..234

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0016465	IVF0016465	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0016465.1-exon	IVF0016465.1-exon-chr05:22680456..22681173	exon
IVF0016465.1-exon	IVF0016465.1-exon-chr05:22681304..22681467	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0016465.1-three_prime_utr	IVF0016465.1-three_prime_utr-chr05:22680456..22680593	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0016465.1-cds	IVF0016465.1-cds-chr05:22680594..22681173	CDS
IVF0016465.1-cds	IVF0016465.1-cds-chr05:22681304..22681461	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0016465.1-five_prime_utr	IVF0016465.1-five_prime_utr-chr05:22681462..22681467	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0016465.1	IVF0016465.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009742	brassinosteroid mediated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding