IVF0015645.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0015645.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNL-type domain-containing protein
Location	chr10: 1768847 .. 1769958 (+)
Sequence length	513
RNA-Seq Expression	IVF0015645.2
Synteny	IVF0015645.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGGCAAAGACTGTCATCTTTTCCTCTCCCACTCTTCTTCACCATTGCTTTAACCCTTCACAAACTCCGCCTCATCCATCTATTAACTCATTCAAACCAATACTCTCTTCCAAAGCAAACCCTAGCAATGGCGTCTTCATTAGGTGAATAATCAAATTCTGCTTTTGTGTTTCCTTTATTATTCCCTTCGTCTCTTTACACCACGAAATTGAGCATCTCTATTCCAGGAGTAGAAACTTCTGTACAGCGCCAGTTACTCGGGGACGCAGGTATAAGGTGCTTACTGTTTCTAGTTTGGTTGATGGTTATACTGGAGACGACGATGAATCATCGCAAAGAAATTCTGATACGGTATGATTTTGTAATGAATATTGAACTGAGGTGGAGATTCTTGTTATTTGTCTTTCTTCTATTTGCAGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACGTGTAATCAATGTAGTGAAAGGACGAAGAGGCTCATTAATCGATTAGCTTACGAACGAGGGCTCGTTTTTGTTCAGGTACACCTTTATATTTCATTGTTCTATTGTGTTTAAAATCGTTTTCTGAATTCTATCAAAGCATTTGATACGATGAACCGTTTTGGATTTGCAAGCGAATCGTTGTTCTTGGAATACAGCATGGTCATATTCACAATTGGAAAATTCTCACAATATTTACTCTGTTTGCATGTTTTGTTCCAAATGCCCTTCAATTCTTGCAATTATGATAACTTTGGTCCCTGAGTGAAGCCATATGGTACTAAATAGACTAAATTTATGTTAGCAACGTCTAGCAAATTAAAGGTTTTTGAAAAAAACATAGATATGTGTTATTGAAGTCGACCTTTCAGGTCTGGAGTTCGATTTTCTACCCCACATTGGTAAGTGTAGTTCTGCAGTATCTTTTAACCTATAAACCCTTTCGATGGTGTAGTAAATGCTGTTTAATTATTATTCTGTGCCCAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGACAATCTTGGCCTTATAGTAGAGTATGACTTCCGGGAGGAGGACACAGATTTGGACTCAAATTCAGATCAAGTTTGA

mRNA sequence

ATGGCAGCGGCAAAGACTGTCATCTTTTCCTCTCCCACTCTTCTTCACCATTGCTTTAACCCTTCACAAACTCCGCCTCATCCATCTATTAACTCATTCAAACCAATACTCTCTTCCAAAGCAAACCCTAGCAATGGCGTCTTCATTAGGAGTAGAAACTTCTGTACAGCGCCAGTTACTCGGGGACGCAGGTATAAGGTGCTTACTGTTTCTAGTTTGGTTGATGGTTATACTGGAGACGACGATGAATCATCGCAAAGAAATTCTGATACGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACGTGTAATCAATGTAGTGAAAGGACGAAGAGGCTCATTAATCGATTAGCTTACGAACGAGGGCTCGTTTTTGTTCAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGACAATCTTGGCCTTATAGTAGAGTATGACTTCCGGGAGGAGGACACAGATTTGGACTCAAATTCAGATCAAGTTTGA

Coding sequence (CDS)

ATGGCAGCGGCAAAGACTGTCATCTTTTCCTCTCCCACTCTTCTTCACCATTGCTTTAACCCTTCACAAACTCCGCCTCATCCATCTATTAACTCATTCAAACCAATACTCTCTTCCAAAGCAAACCCTAGCAATGGCGTCTTCATTAGGAGTAGAAACTTCTGTACAGCGCCAGTTACTCGGGGACGCAGGTATAAGGTGCTTACTGTTTCTAGTTTGGTTGATGGTTATACTGGAGACGACGATGAATCATCGCAAAGAAATTCTGATACGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTAACGTTTACGTGTAATCAATGTAGTGAAAGGACGAAGAGGCTCATTAATCGATTAGCTTACGAACGAGGGCTCGTTTTTGTTCAGTGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGACAATCTTGGCCTTATAGTAGAGTATGACTTCCGGGAGGAGGACACAGATTTGGACTCAAATTCAGATCAAGTTTGA

Protein sequence

MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVTRGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV

Homology

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BLAST of IVF0015645.2 vs. ExPASy Swiss-Prot
Match: Q5SXM8 (DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.2e-07
Identity = 24/66 (36.36%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 84  SSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHK 143
           SS++     AA+  ++      + +TC  C  R+ + I++LAY +G+V V C GCQ +H 
Sbjct: 50  SSEQGPGPAAALG-RVEAAHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHI 109

Query: 144 LVDNLG 150
           + DNLG
Sbjct: 110 IADNLG 114

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BLAST of IVF0015645.2 vs. ExPASy Swiss-Prot
Match: Q0IH40 (DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 20/58 (34.48%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 100 PRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR 158
           P     + +TC  C+ R+ + I+++AY +G+V V+C GC+ +H + DNLG   + + R
Sbjct: 78  PSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLEGR 135

[Close]

BLAST of IVF0015645.2 vs. ExPASy Swiss-Prot
Match: A1L1P7 (DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.9e-06
Identity = 19/43 (44.19%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 106 VTFTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL 149
           + +TC  CS R+ + I++LAY +G+V V C GC+ +H + DNL
Sbjct: 83  LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNL 125

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BLAST of IVF0015645.2 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 78  TGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQCAG 137
           +G    SS   S   AA+  ++      + +TC  C  R+ + I++LAY +G+V V C G
Sbjct: 48  SGWRSSSSAPGSGRAAALG-RVEADHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPG 107

Query: 138 CQKYHKLVDNL 149
           CQ +H + DNL
Sbjct: 108 CQNHHIIADNL 117

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BLAST of IVF0015645.2 vs. ExPASy TrEMBL
Match: A0A5A7SVJ1 (Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00560 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 171
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. ExPASy TrEMBL
Match: A0A1S3BG31 (uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 171
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. ExPASy TrEMBL
Match: A0A1S4DWZ3 (mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489232 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.5e-89
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFI  RNFCTAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFI--RNFCTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 171
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 168

[Close]

BLAST of IVF0015645.2 vs. ExPASy TrEMBL
Match: A0A0A0KR03 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 159/170 (93.53%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAA TVIFSSPTLL H FNPSQT PHPSI SFKPI+SSKANPSNGVFIRSRNFCTAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R RRYKVLTVSSLVDGYTGDDDE SQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 171
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED DLDS+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of IVF0015645.2 vs. ExPASy TrEMBL
Match: A0A6J1GZ90 (uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458229 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73
Identity = 142/170 (83.53%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKT  FSSP LL   FNPSQT PHPSIN+F+PI+SSKANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTQCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 171
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D D++SNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. NCBI nr
Match: XP_008446529.1 (PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA0034513.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa] >TYK09067.1 mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 345 bits (885), Expect = 8.40e-120
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. NCBI nr
Match: XP_016900245.1 (PREDICTED: mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo])

HSP 1 Score: 337 bits (863), Expect = 1.77e-116
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIR  NFCTAPVT
Sbjct: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIR--NFCTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 168

[Close]

BLAST of IVF0015645.2 vs. NCBI nr
Match: XP_004135125.1 (uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypothetical protein Csa_008252 [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 4.41e-109
Identity = 159/170 (93.53%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAA TVIFSSPTLL H FNPSQT PHPSI SFKPI+SSKANPSNGVFIRSRNFCTAPV+
Sbjct: 4   MAAAYTVIFSSPTLLQHSFNPSQTRPHPSITSFKPIVSSKANPSNGVFIRSRNFCTAPVS 63

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R RRYKVLTVSSLVDGYTGDDDE SQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 64  RERRYKVLTVSSLVDGYTGDDDEPSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 123

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED DLDS+SDQV
Sbjct: 124 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDVDLDSSSDQV 173

[Close]

BLAST of IVF0015645.2 vs. NCBI nr
Match: XP_038891803.1 (uncharacterized protein C24H6.02c [Benincasa hispida])

HSP 1 Score: 297 bits (760), Expect = 9.64e-101
Identity = 151/170 (88.82%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKTV FSSP LLHH FN S+T P  SINSFK IL SKANPSNGVFIRSRNF T PVT
Sbjct: 1   MAAAKTVYFSSPALLHHSFNSSETRPLSSINSFKSILFSKANPSNGVFIRSRNFRTVPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R RRYKVLTVS LVDGY GDDDES+QRNSDT AAIDIKLPRRSLMVTFTCNQCSERTKRL
Sbjct: 61  RERRYKVLTVSRLVDGYPGDDDESAQRNSDTAAAIDIKLPRRSLMVTFTCNQCSERTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170
           INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDMDSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. NCBI nr
Match: KAG7032119.1 (DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (726), Expect = 1.47e-95
Identity = 142/170 (83.53%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQTPPHPSINSFKPILSSKANPSNGVFIRSRNFCTAPVT 60
           MAAAKT+ FSSP LL   FNPSQT PHPSIN+F+PI+SSKANPSNG FIRSR F TAPVT
Sbjct: 1   MAAAKTLCFSSPALLQQSFNPSQTRPHPSINAFRPIVSSKANPSNGFFIRSRCFRTAPVT 60

Query: 61  RGRRYKVLTVSSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERTKRL 120
           R  R KVLTVS LVDG +GDDDES+QRNSDTGAAIDIKLPRRSL+VTFTCNQC +RTKRL
Sbjct: 61  RENRNKVLTVSRLVDGNSGDDDESAQRNSDTGAAIDIKLPRRSLLVTFTCNQCGDRTKRL 120

Query: 121 INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSNSDQV 170
           INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D D++SNSDQV
Sbjct: 121 INRLAYERGLVFVQCAGCLKYHKLVDNLGLIVEYDFREDDVDVNSNSDQV 170

[Close]

BLAST of IVF0015645.2 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 83/169 (49.11%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 4   AKTVIFSSPTLLHHCFNPSQTPP---HPSINSFKP--ILSSKANPSNGVFIRSRNFCTAP 63
           A T    SP +L   ++P  T P   H S + +KP      + NP + +           
Sbjct: 2   ANTAAGWSP-VLAPIYSPVNTKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEV 61

Query: 64  VTRGRRYKVLTV-SSLVDGYTGDDDESSQRNSDTGAAIDIKLPRRSLMVTFTCNQCSERT 123
           VT  +R +  +V  SL D    + DE S  +++  A+IDIKLPRRSL V FTCN C ERT
Sbjct: 62  VTPKQRNRSFSVFGSLADDSKLNPDEESNDSAEV-ASIDIKLPRRSLQVEFTCNSCGERT 121

Query: 124 KRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLDSN 167
           KRLINR AYE+GLVFVQCAGC K+HKLVDNLGLIVEYDFRE   DL ++
Sbjct: 122 KRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVEYDFRETSKDLGTD 168

[Close]

BLAST of IVF0015645.2 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-14
Identity = 55/177 (31.07%), Postives = 82/177 (46.33%), Query Frame = 0


Query: 1   MAAAKTVIFSSPTLLHHCFNPSQ----TPPHPSINSFKPILSSKANPSNGVFIRSRNFCT 60
           +++A T+I SS + L   F+P +    +PP   +           +P +     S  F  
Sbjct: 6   LSSAATIISSSSSPL-SIFSPKKRTDSSPPPRIVRLSNKKEDKDYDPQHSESNSSSLFRN 65

Query: 61  APVTRGRRYKVLTVSSLVDGYT---GDDDESSQRNSDTGA------AIDIKLPRRSLMVT 120
             ++      ++  ++ V G+T   G +  S    +DT        ++  K PRR + V 
Sbjct: 66  RTLSNDEAMGLVLSAASVKGWTTGSGMEGPSLPAKTDTDTVSTFPWSLFTKSPRRRMRVA 125

Query: 121 FTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDTDLD 165
           FTCN C +RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +    +  D
Sbjct: 126 FTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNLFHEVKYYVSSSSFD 181

[Close]

BLAST of IVF0015645.2 vs. TAIR 10
Match: AT3G54826.1 (Zim17-type zinc finger protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 0


Query: 100 PRRSLMVTFTCNQCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG 150
           PR   M+ FTC  C  R+ ++ +R +YE G+V V+C GC   H + D  G
Sbjct: 132 PRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRG 181

The following BLAST results are available for this feature:

BLAST of IVF0015645.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5SXM8	9.2e-07	36.36	DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1	[more]
Q0IH40	1.2e-06	34.48	DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1	[more]
A1L1P7	5.9e-06	44.19	DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1	[more]
Q9D113	1.0e-05	35.21	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]

BLAST of IVF0015645.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVJ1	1.3e-91	100.00	Mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3BG31	1.3e-91	100.00	uncharacterized protein C24H6.02c isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A1S4DWZ3	4.5e-89	98.82	mitochondrial protein import protein ZIM17 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KR03	1.6e-83	93.53	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608180 PE...	[more]
A0A6J1GZ90	7.6e-73	83.53	uncharacterized protein LOC111458229 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of IVF0015645.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446529.1	8.40e-120	100.00	PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo] >KAA00345...	[more]
XP_016900245.1	1.77e-116	98.82	PREDICTED: mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo]	[more]
XP_004135125.1	4.41e-109	93.53	uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus] >KGN52030.1 hypot...	[more]
XP_038891803.1	9.64e-101	88.82	uncharacterized protein C24H6.02c [Benincasa hispida]	[more]
KAG7032119.1	1.47e-95	83.53	DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0015645.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68730.1	1.2e-30	49.11	Zim17-type zinc finger protein	[more]
AT5G27280.1	7.9e-14	31.07	Zim17-type zinc finger protein	[more]
AT3G54826.1	2.5e-07	40.00	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 106..153 e-value: 8.5E-17 score: 60.9
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 99..170 score: 15.08724
None	No IPR available	PANTHER	PTHR20922:SF19	F24J5.3	coord: 28..168
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 28..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0015645	IVF0015645	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015645.2-exon	IVF0015645.2-exon-chr10:1768847..1768995	exon
IVF0015645.2-exon	IVF0015645.2-exon-chr10:1769080..1769203	exon
IVF0015645.2-exon	IVF0015645.2-exon-chr10:1769272..1769400	exon
IVF0015645.2-exon	IVF0015645.2-exon-chr10:1769848..1769958	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015645.2-cds	IVF0015645.2-cds-chr10:1768847..1768995	CDS
IVF0015645.2-cds	IVF0015645.2-cds-chr10:1769080..1769203	CDS
IVF0015645.2-cds	IVF0015645.2-cds-chr10:1769272..1769400	CDS
IVF0015645.2-cds	IVF0015645.2-cds-chr10:1769848..1769958	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0015645.2	IVF0015645.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0051087	chaperone binding