IVF0015056.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0015056.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein MNN4-like
Location	chr04: 9845776 .. 9846159 (-)
Sequence length	384
RNA-Seq Expression	IVF0015056.1
Synteny	IVF0015056.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGTCTACAACATAATGGAGGAGATACCGGTGAACATAGACAAGATAATAAGCGAGCACATCACAGCATGGGTCAAGCTTCCTCGCAGAGCAAGACCTTTCCCATACCTAATCGAAAAACTGTGTTTAAAGGCATGTCCAGCGTTAGACAAACTTCCTCAGGTAGAGGTGAAGGATGAGGTTTGGTCCAACTCAATTCGTCACCACATAATTGCCATCCATAAGAATAAGACTAAGCTAAAACGCCTCAAAACCAAACAAGATGGTAAATTAGAGGTTGAAGTAGTGGAAGATAAAGATGAAGAAGAGAAAGAGGAAGATGATATCCCGTTAAAACACAAACGACAGACGAAGAGGAGGCCTCAGAATCAAAGAAAATAA

mRNA sequence

ATGTTAGTCTACAACATAATGGAGGAGATACCGGTGAACATAGACAAGATAATAAGCGAGCACATCACAGCATGGGTCAAGCTTCCTCGCAGAGCAAGACCTTTCCCATACCTAATCGAAAAACTGTGTTTAAAGGCATGTCCAGCGTTAGACAAACTTCCTCAGGTAGAGGTGAAGGATGAGGTTTGGTCCAACTCAATTCGTCACCACATAATTGCCATCCATAAGAATAAGACTAAGCTAAAACGCCTCAAAACCAAACAAGATGGTAAATTAGAGGTTGAAGTAGTGGAAGATAAAGATGAAGAAGAGAAAGAGGAAGATGATATCCCGTTAAAACACAAACGACAGACGAAGAGGAGGCCTCAGAATCAAAGAAAATAA

Coding sequence (CDS)

ATGTTAGTCTACAACATAATGGAGGAGATACCGGTGAACATAGACAAGATAATAAGCGAGCACATCACAGCATGGGTCAAGCTTCCTCGCAGAGCAAGACCTTTCCCATACCTAATCGAAAAACTGTGTTTAAAGGCATGTCCAGCGTTAGACAAACTTCCTCAGGTAGAGGTGAAGGATGAGGTTTGGTCCAACTCAATTCGTCACCACATAATTGCCATCCATAAGAATAAGACTAAGCTAAAACGCCTCAAAACCAAACAAGATGGTAAATTAGAGGTTGAAGTAGTGGAAGATAAAGATGAAGAAGAGAAAGAGGAAGATGATATCCCGTTAAAACACAAACGACAGACGAAGAGGAGGCCTCAGAATCAAAGAAAATAA

Protein sequence

MLVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQTKRRPQNQRK

Homology

[Close]

BLAST of IVF0015056.1 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 95/133 (71.43%), Postives = 102/133 (76.69%), Query Frame = 0


Query: 3   VYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV 62
           +YNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV
Sbjct: 68  IYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV 127

Query: 63  WSNSIRHHIIAIHKNKTKLKRLKTKQDGKLE------VEVVEDKDEEEK---EEDDIPLK 122
           WSNSIRHHIIAIHKNKTKLKRLKTKQD + E      ++  + KD +E        IP K
Sbjct: 128 WSNSIRHHIIAIHKNKTKLKRLKTKQDDEEEASESKKIKTCKAKDSKETLSFASTKIPKK 187

Query: 123 HKRQTKRRPQNQR 127
            K      P   +
Sbjct: 188 KKPTNLPSPNKSK 200

[Close]

BLAST of IVF0015056.1 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.9e-33
Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 1   MLVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKD 60
           MLVY IMEEI VN+ +IIS+HI   VK PR  RPFP LI+KLCLKAC ALD LPQ+ VKD
Sbjct: 15  MLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKD 74

Query: 61  EVWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQTK 120
            +WS++  + IIAI++NK KLK LK KQDGK EV+ V+DKDEEEKEED++PLK KRQ++
Sbjct: 75  GIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRKRQSE 133

[Close]

BLAST of IVF0015056.1 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.6e-29
Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 2   LVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDE 61
           LVY I + + VNI ++ISEHI AWVK P   RPFP LIE+LCLKAC  L + PQVE+KD 
Sbjct: 6   LVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKACLTLKQFPQVELKDG 65

Query: 62  VWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKR 117
           VW+ +  HHIIA+HKNK K KR KTKQDGK EVE V+++ E+EKE++++PLK KR
Sbjct: 66  VWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0015056.1 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.1e-27
Identity = 68/116 (58.62%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 2   LVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDE 61
           LVY I + + VNI ++ISEHI AWVK P   RPFP LIE+LCLK    L++ PQVE+KD 
Sbjct: 6   LVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDG 65

Query: 62  VWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQ 118
           VW+ +  H IIA+HKNK K KR KTKQDGK EVE V+++ E+EKE++++PLK KR+
Sbjct: 66  VWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKRR 121

[Close]

BLAST of IVF0015056.1 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 76/127 (59.84%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MLVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKD 60
           MLVY IM++I VNI KIIS HI A VK PR ARPF YLIE+LCL+AC  L+KLPQVEVKD
Sbjct: 52  MLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQVEVKD 111

Query: 61  EVWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQTKR 120
            +W  S  H IIAIHKNK K+K LKTK+  K+  E+ +D  EEE ++D+IP K KRQ K 
Sbjct: 112 GIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKRQDKE 171

Query: 121 RPQNQRK 128
                +K
Sbjct: 172 DDLGSKK 178

[Close]

BLAST of IVF0015056.1 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 5.29e-53
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 3   VYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV 62
           +YNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV
Sbjct: 68  IYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEV 127

Query: 63  WSNSIRHHIIAIHKNKTKLKRLKTKQDGKLE 93
           WSNSIRHHIIAIHKNKTKLKRLKTKQD + E
Sbjct: 128 WSNSIRHHIIAIHKNKTKLKRLKTKQDDEEE 158

[Close]

BLAST of IVF0015056.1 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (374), Expect = 3.71e-43
Identity = 79/118 (66.95%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MLVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKD 60
           MLVY IMEEI VN+ +IIS+HI   VK PR  RPFP LI+KLCLKAC ALD LPQ+ VKD
Sbjct: 15  MLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKD 74

Query: 61  EVWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQT 118
            +WS++  + IIAI++NK KLK LK KQDGK EV+ V+DKDEEEKEED++PLK KRQ+
Sbjct: 75  GIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRKRQS 132

[Close]

BLAST of IVF0015056.1 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (339), Expect = 4.48e-38
Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 2   LVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDE 61
           LVY I + + VNI ++ISEHI AWVK P   RPFP LIE+LCLKAC  L + PQVE+KD 
Sbjct: 6   LVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKACLTLKQFPQVELKDG 65

Query: 62  VWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKR 116
           VW+ +  HHIIA+HKNK K KR KTKQDGK EVE V+++ E+EKE++++PLK KR
Sbjct: 66  VWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKR 120

[Close]

BLAST of IVF0015056.1 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 130 bits (327), Expect = 2.14e-35
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MLVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKD 60
           MLVY IM++I VNI KIIS HI A VK PR ARPF YLIE+LCL+AC  L+KLPQVEVKD
Sbjct: 52  MLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQVEVKD 111

Query: 61  EVWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQTK 119
            +W  S  H IIAIHKNK K+K LKTK+  K+  E+ +D  EEE ++D+IP K KRQ K
Sbjct: 112 GIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRKRQDK 170

[Close]

BLAST of IVF0015056.1 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 2.36e-34
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 2   LVYNIMEEIPVNIDKIISEHITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDE 61
           LVY I + + VNI ++ISEHI AWVK P   RPFP LIE+LCLK    L++ PQVE+KD 
Sbjct: 6   LVYYIKKHLLVNIGEMISEHIIAWVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDG 65

Query: 62  VWSNSIRHHIIAIHKNKTKLKRLKTKQDGKLEVEVVEDKDEEEKEEDDIPLKHKRQT 118
           VW+ +  H IIA+HKNK K KR KTKQDGK EVE V+++ E+EKE++++PLK KR+ 
Sbjct: 66  VWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEVPLKCKRRN 122

The following BLAST results are available for this feature:

BLAST of IVF0015056.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015056.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BF32	1.2e-38	71.43	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7UWQ4	9.9e-33	66.39	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE...	[more]
A0A5A7TV72	6.6e-29	61.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CJD1	8.1e-27	58.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LAN0	1.4e-26	59.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1	[more]

BLAST of IVF0015056.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97737.1	5.29e-53	95.60	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0060282.1	3.71e-43	66.95	drebrin-like [Cucumis melo var. makuwa]	[more]
KAA0046046.1	4.48e-38	61.74	hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa]	[more]
KGN57727.1	2.14e-35	63.03	hypothetical protein Csa_009739 [Cucumis sativus]	[more]
TYK11921.1	2.36e-34	58.12	hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0015056.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..127

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0015056	IVF0015056	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015056.1-exon	IVF0015056.1-exon-chr04:9845776..9846159	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015056.1-cds	IVF0015056.1-cds-chr04:9845776..9846159	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0015056.1	IVF0015056.1-protein	polypeptide